RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	TMPRSS2	O15393	492 aa		10.65	□□□□□ -0.7
ABCB8-222	ENST00000542328	IGHV3-43D	P0DP04	118 aa		10.65	□□□□□ -0.7
ABCB8-222	ENST00000542328	CD37	P11049	281 aa		10.65	□□□□□ -0.7
ABCB8-222	ENST00000542328	GPR6	P46095	362 aa	Predicted RBP	10.65	□□□□□ -0.7
ABCB8-222	ENST00000542328	LHX4	Q969G2	390 aa		10.65	□□□□□ -0.7
ABCB8-222	ENST00000542328	GNG13	Q9P2W3	67 aa		10.65	□□□□□ -0.7
ABCB8-222	ENST00000542328	NPTN	Q9Y639	398 aa		10.65	□□□□□ -0.7
ABCB8-222	ENST00000542328	C3orf85	A0A1B0GTC6	90 aa		10.65	□□□□□ -0.71
ABCB8-222	ENST00000542328	IGHV3-13	P01766	116 aa		10.65	□□□□□ -0.71
ABCB8-222	ENST00000542328	IGHV3-7	P01780	117 aa		10.65	□□□□□ -0.71
ABCB8-222	ENST00000542328	SUB1	P53999	127 aa	Known RBP eCLIP	10.65	□□□□□ -0.71
ABCB8-222	ENST00000542328	S100A7A	Q86SG5	101 aa		10.65	□□□□□ -0.71
ABCB8-222	ENST00000542328	TMEM104	Q8NE00	496 aa		10.65	□□□□□ -0.71
ABCB8-222	ENST00000542328	OR5M8	Q8NGP6	311 aa		10.65	□□□□□ -0.71
ABCB8-222	ENST00000542328	FAM96B	Q9Y3D0	163 aa		10.65	□□□□□ -0.71
ABCB8-222	ENST00000542328	CA11	O75493	328 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	C1QTNF12	Q5T7M4	302 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	SLC35E1	Q96K37	410 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	PFDN5	Q99471	154 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	FREM3	P0C091	2139 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	TRBV5-7	A0A0A0MS05	114 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	PRF1	P14222	555 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	GNB1	P62873	340 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	FAM209A	Q5JX71	171 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	CLEC18B	Q6UXF7	455 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	RASL12	Q9NYN1	266 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	TRAV39	A0A0B4J263	110 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	GPR37	O15354	613 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	APOBEC3A	P31941	199 aa	Predicted RBP	10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	ADIRF	Q15847	76 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	LINC00596	Q86U02	117 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	LYG1	Q8N1E2	194 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	MUC15	Q8N387	334 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	ZNF485	Q8NCK3	441 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	SH2D2A	Q9NP31	389 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	CA10	Q9NS85	328 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	ONECUT1	Q9UBC0	465 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	PCDH15	Q96QU1	1955 aa		10.64	□□□□□ -0.71
ABCB8-222	ENST00000542328	IGHV2OR16-5	A0A0B4J2B6	119 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	CTSD	P07339	412 aa	Predicted RBP	10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	ACKR3	P25106	362 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	PLA2G5	P39877	138 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	P2RX3	P56373	397 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	USF2	Q15853	346 aa	Predicted RBP	10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328		Q3ZCU0	254 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	STARD4	Q96DR4	205 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	PKIB	Q9C010	78 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	KPTN	Q9Y664	436 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	TAGLN2	P37802	199 aa	Known RBP	10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	PLAUR	Q03405	335 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	FAHD2B	Q6P2I3	314 aa	Predicted RBP	10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	CLEC2A	Q6UVW9	174 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	UNQ9370/PRO34162	Q6UXP9	181 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	OR11H7	Q8NGC8	314 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	OR4D10	Q8NGI6	311 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	DYRK2	Q92630	601 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	PTX4	Q96A99	478 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	SLC25A38	Q96DW6	304 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	DAZAP1	Q96EP5	407 aa	Known RBP	10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	FAHD2A	Q96GK7	314 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	HDHD3	Q9BSH5	251 aa	Predicted RBP	10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	NCOR2	Q9Y618	2525 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	FCGR3B	O75015	233 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	CA7	P43166	264 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	GNG10	P50151	68 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	IL13RA2	Q14627	380 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	PINX1	Q96BK5	328 aa	Known RBP	10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	HEATR5A	Q86XA9	2040 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	SMPD2	O60906	423 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	LPAR6	P43657	344 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	SURF2	Q15527	256 aa	Predicted RBP	10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	C1QTNF5	Q9BXJ0	243 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	ZNF107	Q9UII5	783 aa	Predicted RBP	10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	KCNK7	Q9Y2U2	307 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	WIPI2	Q9Y4P8	454 aa		10.63	□□□□□ -0.71
ABCB8-222	ENST00000542328	NKX2-6	A6NCS4	301 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	ERH	P84090	104 aa	Known RBP	10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	BSPH1	Q075Z2	132 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	BTNL3	Q6UXE8	466 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	POM121L2	Q96KW2	1035 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	OR2D2	Q9H210	308 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	SHISA3	A0PJX4	238 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328		A1L4Q6	167 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	ZG16	O60844	167 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	SCAF4	O95104	1147 aa	Known RBP	10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	CT45A6	P0DMU7	189 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	CT45A5	P0DMU8	189 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	CT45A7	P0DMV0	189 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	CT45A1	Q5HYN5	189 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	CLLU1	Q5K131	121 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	CT45A3	Q8NHU0	189 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	BORCS7	Q96B45	105 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	ZNF488	Q96MN9	340 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	SMCO4	Q9NRQ5	59 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	CLN8	Q9UBY8	286 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	OPN4	Q9UHM6	478 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	URGCP-MRPS24	S4R325	110 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	NUDT19	A8MXV4	375 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	TRDC	B7Z8K6	153 aa		10.62	□□□□□ -0.71
ABCB8-222	ENST00000542328	ADAM10	O14672	748 aa		10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms