RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 RNASEK-C17orf49H0YIS7 233 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 CASQ2O14958 399 aaPredicted RBP4.63□□□□□ -1.67
SUDS3-202ENST00000541280 DEGS1O15121 323 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 OGG1O15527 345 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 ZNF780AO75290 641 aaPredicted RBP4.63□□□□□ -1.67
SUDS3-202ENST00000541280 WBP4O75554 376 aaKnown RBP4.63□□□□□ -1.67
SUDS3-202ENST00000541280 FCN3O75636 299 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 HAND1O96004 215 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 ZNF728P0DKX0 622 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 CAPGP40121 348 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 ARHGDIBP52566 201 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 ERVFC1-1P60608 527 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 PPP3R1P63098 170 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 ADARB1P78563 741 aaKnown RBP4.63□□□□□ -1.67
SUDS3-202ENST00000541280 GPR176Q14439 515 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 RCN1Q15293 331 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 KISS1Q15726 138 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 GRK1Q15835 563 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 YIF1BQ5BJH7 314 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 OGFRL1Q5TC84 451 aaPredicted RBP4.63□□□□□ -1.67
SUDS3-202ENST00000541280 RNLSQ5VYX0 342 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 ELP2Q6IA86 826 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 SPSB3Q6PJ21 355 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 RTN4RL2Q86UN3 420 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 NR2C2APQ86WQ0 139 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 C8orf59Q8N0T1 100 aaPredicted RBP4.63□□□□□ -1.67
SUDS3-202ENST00000541280 ZNF565Q8N9K5 539 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 ASCC1Q8N9N2 400 aaKnown RBP4.63□□□□□ -1.67
SUDS3-202ENST00000541280 TEX45Q8NA69 505 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 APH1BQ8WW43 257 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 CYGBQ8WWM9 190 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 CORO2AQ92828 525 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 SLAMF9Q96A28 289 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 ADAT3Q96EY9 351 aaPredicted RBP4.63□□□□□ -1.67
SUDS3-202ENST00000541280 C1orf147Q96MC9 270 aaPredicted RBP4.63□□□□□ -1.67
SUDS3-202ENST00000541280 S100A13Q99584 98 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 ZNF649Q9BS31 505 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 VCX3BQ9H321 246 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 C16orf95Q9H693 158 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 ZNF696Q9H7X3 374 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 ISG20L2Q9H9L3 353 aaKnown RBP4.63□□□□□ -1.67
SUDS3-202ENST00000541280 HMG20AQ9NP66 347 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 AMBNQ9NP70 447 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 EXOSC4Q9NPD3 245 aaKnown RBP4.63□□□□□ -1.67
SUDS3-202ENST00000541280 TMEM138Q9NPI0 162 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 TAS2R3Q9NYW6 316 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 OR6C3Q9NZP0 311 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 CKLFQ9UBR5 152 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 OR14J1Q9UGF5 321 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 PITPNC1Q9UKF7 332 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 ERGIC3Q9Y282 383 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 TBL2Q9Y4P3 447 aaKnown RBP4.63□□□□□ -1.67
SUDS3-202ENST00000541280 LINC00312Q9Y6C7 94 aa4.63□□□□□ -1.67
SUDS3-202ENST00000541280 CHD3Q12873 2000 aaKnown RBP4.62□□□□□ -1.67
SUDS3-202ENST00000541280 IGKV1-27A0A075B6S5 117 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 TRGV10A0A0A0MS01 117 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 A0A1B0GW55 424 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 ERICH4A6NGS2 130 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 VGLL3A8MV65 326 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 ANGPTL7O43827 346 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 ZNF737O75373 536 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 GPX5O75715 221 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 TSPAN9O75954 239 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 IGKV3-20P01619 116 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 CSN2P05814 226 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 HCKP08631 526 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 DUX4L2P0CJ85 424 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 DUX4L3P0CJ86 424 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 DUX4L4P0CJ87 422 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 DUX4L5P0CJ88 424 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 DUX4L6P0CJ89 424 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 DUX4L7P0CJ90 424 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 LIMS3P0CW19 117 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 LIMS4P0CW20 117 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 GABRR1P24046 479 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 MAPK3P27361 379 aaPredicted RBP4.62□□□□□ -1.67
SUDS3-202ENST00000541280 C21orf33P30042 268 aaPredicted RBP4.62□□□□□ -1.67
SUDS3-202ENST00000541280 POU3F4P49335 361 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 DYNLT3P51808 116 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 RAG2P55895 527 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 EDDM3BP56851 147 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 ELF3P78545 371 aaPredicted RBP4.62□□□□□ -1.67
SUDS3-202ENST00000541280 BDH1Q02338 343 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 SLC34A1Q06495 639 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 ST3GAL4Q11206 333 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 IL13RA2Q14627 380 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 CDK5R1Q15078 307 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 LRRC36Q1X8D7 754 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 DMRTC1Q5HYR2 192 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 MINOS1Q5TGZ0 78 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 DGAT2L7PQ6IED9 249 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 DUX4L9Q6RFH8 374 aaPredicted RBP4.62□□□□□ -1.67
SUDS3-202ENST00000541280 ASCL4Q6XD76 172 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 C17orf107Q6ZR85 190 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 LINC00596Q86U02 117 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 STX19Q8N4C7 294 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 C11orf42Q8N5U0 333 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 MS4A15Q8N5U1 240 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 Q8NFD4 153 aa4.62□□□□□ -1.67
SUDS3-202ENST00000541280 OR11H6Q8NGC7 330 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms