RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 PDCD5O14737 125 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 PDCD6O75340 191 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 IL1AP01583 271 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 CD37P11049 281 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 GZMHP20718 246 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 HTR1DP28221 377 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 CD34P28906 385 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 PSMD7P51665 324 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 OR10A3P58181 314 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 RPS27AP62979 156 aaKnown RBP7.47□□□□□ -1.21
SNHG1-215ENST00000540904 QRFPP83859 136 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 PRR20EP86478 221 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 PRR20CP86479 221 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 PRR20DP86480 221 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 PRR20BP86481 221 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 PRR20AP86496 221 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 RELBQ01201 579 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 UNC119Q13432 240 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 FAM189A2Q15884 450 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 LY6EQ16553 131 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 UTF1Q5T230 341 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 SYT6Q5T7P8 510 aaPredicted RBP7.47□□□□□ -1.21
SNHG1-215ENST00000540904 HES5Q5TA89 166 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 MINOS1Q5TGZ0 78 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 GDPGP1Q6ZNW5 385 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 RTN4RL2Q86UN3 420 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 C3orf56Q8N813 242 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 OR51D1Q8NGF3 324 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 OR4K15Q8NH41 348 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 UBALD1Q8TB05 177 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 ZNF596Q8TC21 504 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 ARL11Q969Q4 196 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 CYYR1Q96J86 154 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 NICN1Q9BSH3 213 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 LINC00574Q9H8X3 128 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 ZNF286AQ9HBT8 521 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 ABCB10Q9NRK6 738 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 IDI2-AS1Q9NZ38 188 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 C1RLQ9NZP8 487 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 MINOS1-NBL1R4GNA1 71 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 V9GY05 133 aa7.47□□□□□ -1.21
SNHG1-215ENST00000540904 A0A087X0M5 115 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 A0A1B0GX30 115 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 SMIM30A4D0T7 59 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 VGLL3A8MV65 326 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 NPIPB11E5RHQ5 1161 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 TNFAIP8O95379 198 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 IGLV1-47P01700 117 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 GLAP06280 429 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 JUNBP17275 347 aaPredicted RBP7.46□□□□□ -1.22
SNHG1-215ENST00000540904 RAB3BP20337 219 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 MDKP21741 143 aaPredicted RBP7.46□□□□□ -1.22
SNHG1-215ENST00000540904 CHATP28329 748 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 BLVRBP30043 206 aaPredicted RBP7.46□□□□□ -1.22
SNHG1-215ENST00000540904 RAB13P51153 203 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 PRRX1P54821 245 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 RAG2P55895 527 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 RPL15P61313 204 aaKnown RBP7.46□□□□□ -1.22
SNHG1-215ENST00000540904 AANATQ16613 207 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 C2orf76Q3KRA6 126 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 DHRS7BQ6IAN0 325 aaPredicted RBP7.46□□□□□ -1.22
SNHG1-215ENST00000540904 LIAT1Q6ZQX7 453 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 OR2W3Q7Z3T1 314 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 C6orf201Q7Z4U5 140 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 PRR18Q8N4B5 295 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 TSPAN14Q8NG11 270 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 OR4P4Q8NGL7 312 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 OR4F5Q8NH21 305 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 PIFOQ8TCI5 191 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 FAM3DQ96BQ1 224 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 URM1Q9BTM9 101 aaKnown RBP7.46□□□□□ -1.22
SNHG1-215ENST00000540904 FAAP24Q9BTP7 215 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 TM2D1Q9BX74 207 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 OR51E2Q9H255 320 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 TXNL4BQ9NX01 149 aaKnown RBP7.46□□□□□ -1.22
SNHG1-215ENST00000540904 DPM3Q9P2X0 92 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 STEAP1Q9UHE8 339 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 STUB1Q9UNE7 303 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 SSR3Q9UNL2 185 aa7.46□□□□□ -1.22
SNHG1-215ENST00000540904 A0A087WXM4 84 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 A0A0A6YYD4 124 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 LOC100506127A0A0U1RQW1 187 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 IFITM5A6NNB3 132 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 LEUTXA8MZ59 168 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 C15orf65H3BRN8 121 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 BUB1B-PAK6H3BSN5 160 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 SDCBPO00560 298 aaPredicted RBP7.45□□□□□ -1.22
SNHG1-215ENST00000540904 SOCS1O15524 211 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 SPINT2O43291 252 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 ORC5O43913 435 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 CA11O75493 328 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 NDUFA7O95182 113 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 CD36P16671 472 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 RCC1P18754 421 aaPredicted RBP7.45□□□□□ -1.22
SNHG1-215ENST00000540904 CFPP27918 469 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 FGF9P31371 208 aaPredicted RBP7.45□□□□□ -1.22
SNHG1-215ENST00000540904 CEACAM3P40198 252 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 RANBP1P43487 201 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 GNG10P50151 68 aa7.45□□□□□ -1.22
SNHG1-215ENST00000540904 HLA-DRB5Q30154 266 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms