RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 M0R233 179 aa10.47□□□□□ -0.73
SMAD3-204ENST00000540846 SIRPB1O00241 398 aa10.47□□□□□ -0.73
SMAD3-204ENST00000540846 HAND1O96004 215 aa10.47□□□□□ -0.73
SMAD3-204ENST00000540846 KNG1P01042 644 aa10.47□□□□□ -0.73
SMAD3-204ENST00000540846 IGHV1-46P01743 117 aa10.47□□□□□ -0.73
SMAD3-204ENST00000540846 CTXN2P0C2S0 81 aa10.47□□□□□ -0.73
SMAD3-204ENST00000540846 SELENOVP59797 346 aa10.47□□□□□ -0.73
SMAD3-204ENST00000540846 SEC61A1P61619 476 aaKnown RBP10.47□□□□□ -0.73
SMAD3-204ENST00000540846 SNRPD2P62316 118 aaKnown RBP10.47□□□□□ -0.73
SMAD3-204ENST00000540846 HERPUD1Q15011 391 aa10.47□□□□□ -0.73
SMAD3-204ENST00000540846 IGSF11Q5DX21 431 aa10.47□□□□□ -0.73
SMAD3-204ENST00000540846 ACP7Q6ZNF0 438 aa10.47□□□□□ -0.73
SMAD3-204ENST00000540846 ZNF497Q6ZNH5 498 aa10.47□□□□□ -0.73
SMAD3-204ENST00000540846 OR10Z1Q8NGY1 313 aa10.47□□□□□ -0.73
SMAD3-204ENST00000540846 ELMOD3Q96FG2 381 aa10.47□□□□□ -0.73
SMAD3-204ENST00000540846 TMEM165Q9HC07 324 aa10.47□□□□□ -0.73
SMAD3-204ENST00000540846 CRYM-AS1A6NIL9 109 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 C17orf100A8MU93 164 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 CCSO14618 274 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 WNT9BO14905 357 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 TUSC2O75896 110 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 SNAPC5O75971 98 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 PPYP01298 95 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 AADACP22760 399 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 LMO1P25800 156 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 CFHR2P36980 270 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 ZNF81P51508 661 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 HERV-K104P61576 105 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 HLA-DRB3P79483 266 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 SLC9A3R2Q15599 337 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 SMIM21Q3B7S5 101 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 ANKRD55Q3KP44 614 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 LGALSLQ3ZCW2 172 aaPredicted RBP10.46□□□□□ -0.74
SMAD3-204ENST00000540846 C20orf204Q6ZNR8 217 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 ZCCHC24Q8N2G6 241 aaKnown RBP10.46□□□□□ -0.74
SMAD3-204ENST00000540846 OR4A4PQ8NGN8 299 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 COQ8AQ8NI60 647 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 PLPPR1Q8TBJ4 325 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 TOMM40LQ969M1 308 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 CABLES2Q9BTV7 478 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 RAB18Q9NP72 206 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 UFSP2Q9NUQ7 469 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 GLS2Q9UI32 602 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 APCP25054 2843 aa10.46□□□□□ -0.74
SMAD3-204ENST00000540846 IGKV1-6A0A0C4DH72 117 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 HMSDA8MTL9 139 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 VSTM5A8MXK1 200 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 NPIPB11E5RHQ5 1161 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 ZNF205O95201 554 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 IFNA2P01563 188 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 TK1P04183 234 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 CD55P08174 381 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 SCTP09683 121 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 NFYAP23511 347 aaPredicted RBP10.45□□□□□ -0.74
SMAD3-204ENST00000540846 GMFBP60983 142 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 KCTD9Q7L273 389 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 SGPP2Q8IWX5 399 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 SLC38A6Q8IZM9 456 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 C14orf79Q96F83 325 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 MEGF10Q96KG7 1140 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 FAM210AQ96ND0 272 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 RSRP1Q9BUV0 290 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 CBLN4Q9NTU7 201 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 C1orf123Q9NWV4 160 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 RASL12Q9NYN1 266 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 ZDHHC8Q9ULC8 765 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 DYSFO75923 2080 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 ABCA12Q86UK0 2595 aa10.45□□□□□ -0.74
SMAD3-204ENST00000540846 TRAV14DV4A0A0A6YYC5 116 aa10.44□□□□□ -0.74
SMAD3-204ENST00000540846 hCG_1807616A0A1W2PRN6 198 aa10.44□□□□□ -0.74
SMAD3-204ENST00000540846 RFPL4AA6NLU0 287 aa10.44□□□□□ -0.74
SMAD3-204ENST00000540846 SRRM5B3KS81 715 aa10.44□□□□□ -0.74
SMAD3-204ENST00000540846 RFPL4AL1F8VTS6 287 aa10.44□□□□□ -0.74
SMAD3-204ENST00000540846 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.44□□□□□ -0.74
SMAD3-204ENST00000540846 IFNL4K9M1U5 179 aa10.44□□□□□ -0.74
SMAD3-204ENST00000540846 SPRY3O43610 288 aa10.44□□□□□ -0.74
SMAD3-204ENST00000540846 RCC1P18754 421 aaPredicted RBP10.44□□□□□ -0.74
SMAD3-204ENST00000540846 GATA4P43694 442 aa10.44□□□□□ -0.74
SMAD3-204ENST00000540846 PPOXP50336 477 aa10.44□□□□□ -0.74
SMAD3-204ENST00000540846 PIGPP57054 158 aa10.44□□□□□ -0.74
SMAD3-204ENST00000540846 FXYD4P59646 89 aa10.44□□□□□ -0.74
SMAD3-204ENST00000540846 FGL1Q08830 312 aa10.44□□□□□ -0.74
SMAD3-204ENST00000540846 FAM90A1Q86YD7 464 aa10.44□□□□□ -0.74
SMAD3-204ENST00000540846 LRRC29Q8WV35 223 aa10.44□□□□□ -0.74
SMAD3-204ENST00000540846 OR2V2Q96R30 315 aa10.44□□□□□ -0.74
SMAD3-204ENST00000540846 UBTD1Q9HAC8 227 aa10.44□□□□□ -0.74
SMAD3-204ENST00000540846 SEBOXQ9HB31 216 aaPredicted RBP10.44□□□□□ -0.74
SMAD3-204ENST00000540846 SLC2A9Q9NRM0 540 aa10.44□□□□□ -0.74
SMAD3-204ENST00000540846 MBNL3Q9NUK0 354 aaKnown RBP10.44□□□□□ -0.74
SMAD3-204ENST00000540846 OR14J1Q9UGF5 321 aa10.44□□□□□ -0.74
SMAD3-204ENST00000540846 PCDHB10Q9UN67 800 aa10.44□□□□□ -0.74
SMAD3-204ENST00000540846 UNC79Q9P2D8 2635 aa10.44□□□□□ -0.74
SMAD3-204ENST00000540846 BET1O15155 118 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 DIRAS3O95661 229 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 RBMXP38159 391 aaKnown RBP10.43□□□□□ -0.74
SMAD3-204ENST00000540846 KCNJ3P48549 501 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 CEBPDP49716 269 aaPredicted RBP10.43□□□□□ -0.74
SMAD3-204ENST00000540846 ATXN7L3Q14CW9 347 aaPredicted RBP10.43□□□□□ -0.74
SMAD3-204ENST00000540846 ABCA11PQ4W5N1 156 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 FAM209AQ5JX71 171 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms