RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 SYT6Q5T7P8 510 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC1-202ENST00000540486 ZNF773Q6PK81 442 aa7.12□□□□□ -1.27
TRAPPC1-202ENST00000540486 GDPD3Q7L5L3 318 aa7.12□□□□□ -1.27
TRAPPC1-202ENST00000540486 PDZD9Q8IXQ8 264 aa7.12□□□□□ -1.27
TRAPPC1-202ENST00000540486 FAM185AQ8N0U4 392 aa7.12□□□□□ -1.27
TRAPPC1-202ENST00000540486 OSR2Q8N2R0 312 aa7.12□□□□□ -1.27
TRAPPC1-202ENST00000540486 JAGN1Q8N5M9 183 aa7.12□□□□□ -1.27
TRAPPC1-202ENST00000540486 TMEM104Q8NE00 496 aa7.12□□□□□ -1.27
TRAPPC1-202ENST00000540486 PHYHIPQ92561 330 aa7.12□□□□□ -1.27
TRAPPC1-202ENST00000540486 THRSPQ92748 146 aa7.12□□□□□ -1.27
TRAPPC1-202ENST00000540486 CPNE2Q96FN4 548 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC1-202ENST00000540486 CYYR1Q96J86 154 aa7.12□□□□□ -1.27
TRAPPC1-202ENST00000540486 GLS2Q9UI32 602 aa7.12□□□□□ -1.27
TRAPPC1-202ENST00000540486 ST3GAL6Q9Y274 331 aa7.12□□□□□ -1.27
TRAPPC1-202ENST00000540486 AK6Q9Y3D8 172 aaKnown RBP7.12□□□□□ -1.27
TRAPPC1-202ENST00000540486 TRDV1A0A1B0GX56 115 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 CCRL2O00421 344 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 MGST3O14880 152 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 GEMIN2O14893 280 aaKnown RBP7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 ZNF780AO75290 641 aaPredicted RBP7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 MMP23AO75900 390 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 CSTBP04080 98 aaKnown RBP7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 CGB3P0DN86 165 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 CGB7P0DN87 165 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 PSMA1P25786 263 aaKnown RBP7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 GLIPR1P48060 266 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 BMXP51813 675 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 EDDM3BP56851 147 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 KLRD1Q13241 179 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 EDDM3AQ14507 147 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 IL13RA2Q14627 380 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 KCTD21Q4G0X4 260 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 NHLRC3Q5JS37 347 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 CMTM4Q8IZR5 234 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 PNKDQ8N490 385 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 NKAIN3Q8N8D7 197 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 FOXRED1Q96CU9 486 aaPredicted RBP7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 COQ2Q96H96 371 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 AJUBAQ96IF1 538 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 S100A13Q99584 98 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 UQCC2Q9BRT2 126 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 BANF2Q9H503 90 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 METTL8Q9H825 291 aaKnown RBP7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 NDUFB11Q9NX14 153 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 MRPS28Q9Y2Q9 187 aaKnown RBP7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 DSCAML1Q8TD84 2053 aa7.11□□□□□ -1.27
TRAPPC1-202ENST00000540486 KIAA2026Q5HYC2 2103 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 A0A1W2PRD5 423 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 A0A1W2PRF3 423 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 A0A1W2PRM7 423 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 SLC22A1O15245 554 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 CSN2P05814 226 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 ZNF728P0DKX0 622 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 PF4V1P10720 104 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 GTF2F2P13984 249 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 CALRP27797 417 aaKnown RBP7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 PSMB9P28065 219 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 RBM11P57052 281 aaKnown RBP7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 QRFPP83859 136 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 MEF2CQ06413 473 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 GPR176Q14439 515 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 GLT8D1Q68CQ7 371 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 AWAT2Q6E213 333 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 SIGIRRQ6IA17 410 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 OR10K2Q6IF99 312 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 SUMF2Q8NBJ7 301 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 CHST4Q8NCG5 386 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 PLPPR1Q8TBJ4 325 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 WIPF2Q8TF74 440 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 C17orf50Q8WW18 174 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 FCGR1BQ92637 280 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 CORO2AQ92828 525 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 IFT22Q9H7X7 185 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 ING3Q9NXR8 418 aa7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 LSM4Q9Y4Z0 139 aaKnown RBP7.1□□□□□ -1.27
TRAPPC1-202ENST00000540486 TRAV1-2A0A0B4J238 106 aa7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 hADV38S2A0JD32 116 aa7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 TMEM14DPA8MWL7 114 aa7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 HSPB6O14558 160 aa7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 ARL6IP5O75915 188 aa7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 JTBO76095 146 aa7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 OR7C1O76099 320 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 PAHP00439 452 aa7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 MGMTP16455 207 aa7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 GALP22466 123 aa7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 HTR2CP28335 458 aa7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 FGF9P31371 208 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 GDNFP39905 211 aa7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 UBE2E1P51965 193 aa7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 P2RX3P56373 397 aa7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 OR10A3P58181 314 aa7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 BLMHQ13867 455 aa7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 ATXN7L3Q14CW9 347 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 NEDD8Q15843 81 aa7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 C17orf58Q2M2W7 97 aa7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 MPV17LQ2QL34 196 aa7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 PAN3Q58A45 887 aaKnown RBP7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 TCTEX1D4Q5JR98 221 aa7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 KRBOX4Q5JUW0 171 aa7.09□□□□□ -1.27
TRAPPC1-202ENST00000540486 UTF1Q5T230 341 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms