RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 CEACAM6P40199 344 aa6.36□□□□□ -1.39
CD9-207ENST00000538418 SARNPP82979 210 aaKnown RBP6.36□□□□□ -1.39
CD9-207ENST00000538418 C15orf32Q32M92 178 aa6.36□□□□□ -1.39
CD9-207ENST00000538418 KRTAP21-3Q3LHN1 58 aa6.36□□□□□ -1.39
CD9-207ENST00000538418 TTLL9Q3SXZ7 439 aa6.36□□□□□ -1.39
CD9-207ENST00000538418 FAM19A1Q7Z5A9 133 aa6.36□□□□□ -1.39
CD9-207ENST00000538418 STPG2Q8N412 459 aa6.36□□□□□ -1.39
CD9-207ENST00000538418 DOK4Q8TEW6 326 aa6.36□□□□□ -1.39
CD9-207ENST00000538418 SKA2Q8WVK7 121 aaPredicted RBP6.36□□□□□ -1.39
CD9-207ENST00000538418 IFT81Q8WYA0 676 aa6.36□□□□□ -1.39
CD9-207ENST00000538418 OR2A5Q96R48 311 aa6.36□□□□□ -1.39
CD9-207ENST00000538418 KIFC1Q9BW19 673 aa6.36□□□□□ -1.39
CD9-207ENST00000538418 SLIRPQ9GZT3 109 aaKnown RBP6.36□□□□□ -1.39
CD9-207ENST00000538418 DRC3Q9H069 523 aa6.36□□□□□ -1.39
CD9-207ENST00000538418 OR51B5Q9H339 312 aa6.36□□□□□ -1.39
CD9-207ENST00000538418 ACOT13Q9NPJ3 140 aa6.36□□□□□ -1.39
CD9-207ENST00000538418 TREX1Q9NSU2 369 aa6.36□□□□□ -1.39
CD9-207ENST00000538418 PCYOX1Q9UHG3 505 aa6.36□□□□□ -1.39
CD9-207ENST00000538418 ZNF835Q9Y2P0 537 aa6.36□□□□□ -1.39
CD9-207ENST00000538418 ZNF257Q9Y2Q1 563 aa6.36□□□□□ -1.39
CD9-207ENST00000538418 CSAG2Q9Y5P2 127 aa6.36□□□□□ -1.39
CD9-207ENST00000538418 ITPR3Q14573 2671 aa6.36□□□□□ -1.39
CD9-207ENST00000538418 PCNX1Q96RV3 2341 aa6.36□□□□□ -1.39
CD9-207ENST00000538418 NIPBLQ6KC79 2804 aaeCLIP6.35□□□□□ -1.39
CD9-207ENST00000538418 IGHV2OR16-5A0A0B4J2B6 119 aa6.35□□□□□ -1.39
CD9-207ENST00000538418 FABP12A6NFH5 140 aa6.35□□□□□ -1.39
CD9-207ENST00000538418 OR51F1A6NGY5 319 aa6.35□□□□□ -1.39
CD9-207ENST00000538418 PSIP1O75475 530 aaKnown RBP6.35□□□□□ -1.39
CD9-207ENST00000538418 NSA2O95478 260 aaKnown RBP6.35□□□□□ -1.39
CD9-207ENST00000538418 MOSP00540 346 aa6.35□□□□□ -1.39
CD9-207ENST00000538418 BGLAPP02818 100 aa6.35□□□□□ -1.39
CD9-207ENST00000538418 FUT3P21217 361 aa6.35□□□□□ -1.39
CD9-207ENST00000538418 RPA3P35244 121 aaPredicted RBP6.35□□□□□ -1.39
CD9-207ENST00000538418 GALR1P47211 349 aa6.35□□□□□ -1.39
CD9-207ENST00000538418 C2orf54Q08AI8 447 aa6.35□□□□□ -1.39
CD9-207ENST00000538418 POU2AF1Q16633 256 aa6.35□□□□□ -1.39
CD9-207ENST00000538418 SPNS3Q6ZMD2 512 aa6.35□□□□□ -1.39
CD9-207ENST00000538418 Q6ZVH6 145 aa6.35□□□□□ -1.39
CD9-207ENST00000538418 SLC30A8Q8IWU4 369 aa6.35□□□□□ -1.39
CD9-207ENST00000538418 FAM71E2Q8N5Q1 922 aa6.35□□□□□ -1.39
CD9-207ENST00000538418 NECAP1Q8NC96 275 aa6.35□□□□□ -1.39
CD9-207ENST00000538418 PLPP5Q8NEB5 264 aa6.35□□□□□ -1.39
CD9-207ENST00000538418 PHF10Q8WUB8 498 aaKnown RBP6.35□□□□□ -1.39
CD9-207ENST00000538418 TMEM101Q96IK0 257 aa6.35□□□□□ -1.39
CD9-207ENST00000538418 BIRC8Q96P09 236 aa6.35□□□□□ -1.39
CD9-207ENST00000538418 DOCK10Q96BY6 2186 aa6.35□□□□□ -1.39
CD9-207ENST00000538418 CELSR1Q9NYQ6 3014 aa6.35□□□□□ -1.39
CD9-207ENST00000538418 NF1P21359 2839 aa6.35□□□□□ -1.39
CD9-207ENST00000538418 MAP1AP78559 2803 aaPredicted RBP6.34□□□□□ -1.39
CD9-207ENST00000538418 IGHV3OR16-9A0A0B4J2B5 98 aa6.34□□□□□ -1.39
CD9-207ENST00000538418 ZFP92A6NM28 416 aa6.34□□□□□ -1.39
CD9-207ENST00000538418 SULT1C2O00338 296 aa6.34□□□□□ -1.39
CD9-207ENST00000538418 ZNF593O00488 134 aaPredicted RBP6.34□□□□□ -1.39
CD9-207ENST00000538418 FABP3P05413 133 aa6.34□□□□□ -1.39
CD9-207ENST00000538418 UQCRHP07919 91 aa6.34□□□□□ -1.39
CD9-207ENST00000538418 OGNP20774 298 aaKnown RBP6.34□□□□□ -1.39
CD9-207ENST00000538418 SLC35A1P78382 337 aa6.34□□□□□ -1.39
CD9-207ENST00000538418 STX4Q12846 297 aa6.34□□□□□ -1.39
CD9-207ENST00000538418 GUSBP1Q15486 140 aa6.34□□□□□ -1.39
CD9-207ENST00000538418 BSXQ3C1V8 233 aa6.34□□□□□ -1.39
CD9-207ENST00000538418 SHISA6Q6ZSJ9 500 aa6.34□□□□□ -1.39
CD9-207ENST00000538418 C2orf73Q8N5S3 287 aaPredicted RBP6.34□□□□□ -1.39
CD9-207ENST00000538418 ACBD4Q8NC06 268 aa6.34□□□□□ -1.39
CD9-207ENST00000538418 NPBQ8NG41 125 aa6.34□□□□□ -1.39
CD9-207ENST00000538418 RORBQ92753 470 aa6.34□□□□□ -1.39
CD9-207ENST00000538418 ARV1Q9H2C2 271 aa6.34□□□□□ -1.39
CD9-207ENST00000538418 TRIM45Q9H8W5 580 aaPredicted RBP6.34□□□□□ -1.39
CD9-207ENST00000538418 MED4Q9NPJ6 270 aa6.34□□□□□ -1.39
CD9-207ENST00000538418 IFT46Q9NQC8 304 aa6.34□□□□□ -1.39
CD9-207ENST00000538418 ZNF107Q9UII5 783 aaPredicted RBP6.34□□□□□ -1.39
CD9-207ENST00000538418 SLC22A7Q9Y694 548 aa6.34□□□□□ -1.39
CD9-207ENST00000538418 PCM1Q15154 2024 aa6.33□□□□□ -1.4
CD9-207ENST00000538418 AKAP9Q99996 3911 aa6.33□□□□□ -1.4
CD9-207ENST00000538418 ABCA2Q9BZC7 2435 aa6.33□□□□□ -1.4
CD9-207ENST00000538418 E5RI56 91 aa6.33□□□□□ -1.4
CD9-207ENST00000538418 MPC1LP0DKB6 136 aa6.33□□□□□ -1.4
CD9-207ENST00000538418 MLNP12872 115 aa6.33□□□□□ -1.4
CD9-207ENST00000538418 RAB3AP20336 220 aa6.33□□□□□ -1.4
CD9-207ENST00000538418 P2RX1P51575 399 aa6.33□□□□□ -1.4
CD9-207ENST00000538418 CACNG7P62955 275 aa6.33□□□□□ -1.4
CD9-207ENST00000538418 SSX7Q7RTT5 188 aa6.33□□□□□ -1.4
CD9-207ENST00000538418 SLC13A5Q86YT5 568 aaPredicted RBP6.33□□□□□ -1.4
CD9-207ENST00000538418 KRT222Q8N1A0 295 aa6.33□□□□□ -1.4
CD9-207ENST00000538418 OR11H7Q8NGC8 314 aa6.33□□□□□ -1.4
CD9-207ENST00000538418 ACTRT1Q8TDG2 376 aa6.33□□□□□ -1.4
CD9-207ENST00000538418 C20orf144Q9BQM9 153 aa6.33□□□□□ -1.4
CD9-207ENST00000538418 MYOZ1Q9NP98 299 aaPredicted RBP6.33□□□□□ -1.4
CD9-207ENST00000538418 TRAPPC4Q9Y296 219 aa6.33□□□□□ -1.4
CD9-207ENST00000538418 AP3M1Q9Y2T2 418 aa6.33□□□□□ -1.4
CD9-207ENST00000538418 CCDC88CQ9P219 2028 aa6.32□□□□□ -1.4
CD9-207ENST00000538418 IGKV1-8A0A0C4DH67 115 aa6.32□□□□□ -1.4
CD9-207ENST00000538418 KLRC4-KLRK1H3BQV0 150 aa6.32□□□□□ -1.4
CD9-207ENST00000538418 M0R1B8 84 aa6.32□□□□□ -1.4
CD9-207ENST00000538418 NPIPB7O75200 414 aa6.32□□□□□ -1.4
CD9-207ENST00000538418 PTHP01270 115 aa6.32□□□□□ -1.4
CD9-207ENST00000538418 CD3GP09693 182 aa6.32□□□□□ -1.4
CD9-207ENST00000538418 HLA-GP17693 338 aa6.32□□□□□ -1.4
CD9-207ENST00000538418 RBMXP38159 391 aaKnown RBP6.32□□□□□ -1.4
CD9-207ENST00000538418 CYB561P49447 251 aa6.32□□□□□ -1.4
CD9-207ENST00000538418 KIR2DS1Q14954 304 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms