RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 MED13LQ71F56 2210 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 RNASEK-C17orf49H0YIS7 233 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 PSG2P11465 335 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 ADCYAP1P18509 176 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 PJVKQ0ZLH3 352 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 ZNF154Q13106 437 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 MRPL49Q13405 166 aaKnown RBP7.43□□□□□ -1.22
UBE3B-208ENST00000538070 HERPUD1Q15011 391 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 LDLRAD3Q86YD5 345 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 CCDC54Q8NEL0 328 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 OR10V1Q8NGI7 309 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 ADAMTS17Q8TE56 1095 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 MARVELD3Q96A59 401 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 TMEM45BQ96B21 275 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 ATRXP46100 2492 aa7.43□□□□□ -1.22
UBE3B-208ENST00000538070 ARHGAP21Q5T5U3 1957 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 KIAA1549Q9HCM3 1950 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 IGKV3D-15A0A087WSY6 115 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 LINC01387J3KSC0 135 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 JTBO76095 146 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 ZNF883P0CG24 379 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 ECI1P42126 302 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 GABRA2P47869 451 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 FOXF2Q12947 444 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 EIF3IQ13347 325 aaKnown RBP7.42□□□□□ -1.22
UBE3B-208ENST00000538070 OR5A2Q8NGI9 324 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 OR2G3Q8NGZ4 309 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 NTNG2Q96CW9 530 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 Q9N2K0 584 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 DLL3Q9NYJ7 618 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 ADGRG4Q8IZF6 3080 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 IGKV1-6A0A0C4DH72 117 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 TRDCB7Z8K6 153 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 C9JQL5 133 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 H7C2Y5 167 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 CHST1O43916 411 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 S100GP29377 79 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 MPV17P39210 176 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 HAGHQ16775 308 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 BTNL3Q6UXE8 466 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 DBX2Q6ZNG2 339 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 OR5C1Q8NGR4 320 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 OR5P3Q8WZ94 311 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 MSI2Q96DH6 328 aaKnown RBP7.42□□□□□ -1.22
UBE3B-208ENST00000538070 DNTTIP1Q9H147 329 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 OPN3Q9H1Y3 402 aaPredicted RBP7.42□□□□□ -1.22
UBE3B-208ENST00000538070 PLA2G2EQ9NZK7 142 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 ZNF292O60281 2723 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 TRAV24A0A0B4J272 114 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 ATXN7O15265 892 aaPredicted RBP7.42□□□□□ -1.22
UBE3B-208ENST00000538070 RRP8O43159 456 aaKnown RBP7.42□□□□□ -1.22
UBE3B-208ENST00000538070 FAM157CP0CG43 387 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 IGHV1-2P23083 117 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 CEACAM6P40199 344 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 AESQ08117 197 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 KRBOX4Q5JUW0 171 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 SHEQ5VZ18 495 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 SCCPDHQ8NBX0 429 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 ISOC2Q96AB3 205 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 MMP26Q9NRE1 261 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 FAM212BQ9NTI7 297 aaPredicted RBP7.42□□□□□ -1.22
UBE3B-208ENST00000538070 DNAJB11Q9UBS4 358 aa7.42□□□□□ -1.22
UBE3B-208ENST00000538070 PUS1Q9Y606 427 aaKnown RBP eCLIP7.42□□□□□ -1.22
UBE3B-208ENST00000538070 KIR2DS1A0A191URI9 304 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 CEACAM18A8MTB9 384 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 DNASE2O00115 360 aaPredicted RBP7.41□□□□□ -1.22
UBE3B-208ENST00000538070 CDK2AP1O14519 115 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 ZNF806P0C7X5 589 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 KIR2DS4P43632 304 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 TNFSF10P50591 281 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 LINC00205P59089 165 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 ZNF816Q0VGE8 651 aaPredicted RBP7.41□□□□□ -1.22
UBE3B-208ENST00000538070 KIR2DS1Q14954 304 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 OR2C3Q8N628 320 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 MDS2Q8NDY4 140 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 BCL2L2Q92843 193 aaPredicted RBP7.41□□□□□ -1.22
UBE3B-208ENST00000538070 RTL8AQ9BWD3 113 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 SPACA1Q9HBV2 294 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 MED9Q9NWA0 146 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 SPTBN1Q01082 2364 aaKnown RBP7.41□□□□□ -1.22
UBE3B-208ENST00000538070 TRBV6-7A0A0A0MS04 114 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 TXNL1O43396 289 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 OR2H2O95918 312 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 KRASP01116 189 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 IL2RGP31785 369 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 PPP1CCP36873 323 aaKnown RBP7.41□□□□□ -1.22
UBE3B-208ENST00000538070 DYNLT3P51808 116 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 EWSR1Q01844 656 aaKnown RBP eCLIP7.41□□□□□ -1.22
UBE3B-208ENST00000538070 PLA2G2CQ5R387 149 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 OR8G2PQ6IF36 304 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 PLPPR1Q8TBJ4 325 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 MRGPRDQ8TDS7 321 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 LINC00470Q9BZP3 86 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 PARD6AQ9NPB6 346 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 HMGB3O15347 200 aaKnown RBP7.41□□□□□ -1.22
UBE3B-208ENST00000538070 OR3A1P47881 315 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 ZNF83P51522 516 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 MST1LQ2TV78 715 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 COLCA1Q6ZS62 124 aa7.41□□□□□ -1.22
UBE3B-208ENST00000538070 DEFB108BQ8NET1 73 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms