RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 LIN54Q6MZP7 749 aa10.05□□□□□ -0.8
CLIP1-208ENST00000537004 LPCAT3Q6P1A2 487 aa10.05□□□□□ -0.8
CLIP1-208ENST00000537004 LRRC20Q8TCA0 184 aa10.05□□□□□ -0.8
CLIP1-208ENST00000537004 RTBDNQ9BSG5 229 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-208ENST00000537004 RTL8AQ9BWD3 113 aa10.05□□□□□ -0.8
CLIP1-208ENST00000537004 PKIBQ9C010 78 aa10.05□□□□□ -0.8
CLIP1-208ENST00000537004 OR51I2Q9H344 312 aa10.05□□□□□ -0.8
CLIP1-208ENST00000537004 PLK3Q9H4B4 646 aa10.05□□□□□ -0.8
CLIP1-208ENST00000537004 IL36RNQ9UBH0 155 aa10.05□□□□□ -0.8
CLIP1-208ENST00000537004 B9A039 149 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 TSPAN9O75954 239 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 OR5H8P0DN80 308 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 NFYAP23511 347 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-208ENST00000537004 IL24Q13007 206 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 MPV17LQ2QL34 196 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 ALKBH6Q3KRA9 238 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 ZNF660Q6AZW8 331 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-208ENST00000537004 Q6ZPA2 131 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 ZNF488Q96MN9 340 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 SYT3Q9BQG1 590 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 ZNF2Q9BSG1 426 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-208ENST00000537004 MRPL37Q9BZE1 423 aaKnown RBP10.04□□□□□ -0.8
CLIP1-208ENST00000537004 NECAP2Q9NVZ3 263 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 KIAA2026Q5HYC2 2103 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 IQCF6A8MYZ5 107 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 J3QT63 122 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 CCSO14618 274 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 PRKACAP17612 351 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 HLA-GP17693 338 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 EFNA4P52798 201 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 PSG7Q13046 419 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 EFNB3Q15768 340 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 FAM122CQ6P4D5 195 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 KCTD9Q7L273 389 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 KLF14Q8TD94 323 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-208ENST00000537004 ELMOD3Q96FG2 381 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 MARS2Q96GW9 593 aaKnown RBP10.04□□□□□ -0.8
CLIP1-208ENST00000537004 MICU1Q9BPX6 476 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 ADAT1Q9BUB4 502 aaKnown RBP10.04□□□□□ -0.8
CLIP1-208ENST00000537004 HEXA-AS1Q9H8Q6 139 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 ZNF286AQ9HBT8 521 aa10.04□□□□□ -0.8
CLIP1-208ENST00000537004 BARX1Q9HBU1 254 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-208ENST00000537004 RCC2Q9P258 522 aaKnown RBP10.04□□□□□ -0.8
CLIP1-208ENST00000537004 ANK3Q12955 4377 aaKnown RBP10.03□□□□□ -0.8
CLIP1-208ENST00000537004 LRP5LA4QPB2 252 aa10.03□□□□□ -0.8
CLIP1-208ENST00000537004 RHBDL1O75783 438 aa10.03□□□□□ -0.8
CLIP1-208ENST00000537004 SFT2D2O95562 160 aa10.03□□□□□ -0.8
CLIP1-208ENST00000537004 F12P00748 615 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-208ENST00000537004 PGAM2P15259 253 aa10.03□□□□□ -0.8
CLIP1-208ENST00000537004 SELEP16581 610 aa10.03□□□□□ -0.8
CLIP1-208ENST00000537004 CXCL2P19875 107 aa10.03□□□□□ -0.8
CLIP1-208ENST00000537004 GLRA1P23415 457 aa10.03□□□□□ -0.8
CLIP1-208ENST00000537004 MPV17P39210 176 aa10.03□□□□□ -0.8
CLIP1-208ENST00000537004 ECI1P42126 302 aa10.03□□□□□ -0.8
CLIP1-208ENST00000537004 SEC61A1P61619 476 aaKnown RBP10.03□□□□□ -0.8
CLIP1-208ENST00000537004 SUPT4H1P63272 117 aaKnown RBP10.03□□□□□ -0.8
CLIP1-208ENST00000537004 SRSF4Q08170 494 aaKnown RBP10.03□□□□□ -0.8
CLIP1-208ENST00000537004 UNQ6126/PRO20091Q6UXV3 157 aa10.03□□□□□ -0.8
CLIP1-208ENST00000537004 WDR86Q86TI4 376 aa10.03□□□□□ -0.8
CLIP1-208ENST00000537004 LINC00596Q86U02 117 aa10.03□□□□□ -0.8
CLIP1-208ENST00000537004 FAM58AQ8N1B3 248 aa10.03□□□□□ -0.8
CLIP1-208ENST00000537004 OR8H1Q8NGG4 311 aa10.03□□□□□ -0.8
CLIP1-208ENST00000537004 CHMP1AQ9HD42 196 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-208ENST00000537004 C14orf166Q9Y224 244 aaKnown RBP10.03□□□□□ -0.8
CLIP1-208ENST00000537004 FXYD6-FXYD2A0A087WZ82 144 aa10.02□□□□□ -0.8
CLIP1-208ENST00000537004 DBX1A6NMT0 343 aa10.02□□□□□ -0.8
CLIP1-208ENST00000537004 HMSDA8MTL9 139 aa10.02□□□□□ -0.8
CLIP1-208ENST00000537004 SNAPC5O75971 98 aa10.02□□□□□ -0.8
CLIP1-208ENST00000537004 HEXAP06865 529 aa10.02□□□□□ -0.8
CLIP1-208ENST00000537004 DUSP1P28562 367 aa10.02□□□□□ -0.8
CLIP1-208ENST00000537004 GLRXP35754 106 aa10.02□□□□□ -0.8
CLIP1-208ENST00000537004 GMFBP60983 142 aa10.02□□□□□ -0.8
CLIP1-208ENST00000537004 KRTAP1-1Q07627 177 aa10.02□□□□□ -0.8
CLIP1-208ENST00000537004 SLC9A3R2Q15599 337 aa10.02□□□□□ -0.8
CLIP1-208ENST00000537004 FAM76BQ5HYJ3 339 aa10.02□□□□□ -0.8
CLIP1-208ENST00000537004 CLEC2AQ6UVW9 174 aa10.02□□□□□ -0.8
CLIP1-208ENST00000537004 DHRS11Q6UWP2 260 aa10.02□□□□□ -0.8
CLIP1-208ENST00000537004 SCCPDHQ8NBX0 429 aa10.02□□□□□ -0.8
CLIP1-208ENST00000537004 LHFPL5Q8TAF8 219 aa10.02□□□□□ -0.8
CLIP1-208ENST00000537004 MRPL24Q96A35 216 aaKnown RBP10.02□□□□□ -0.8
CLIP1-208ENST00000537004 PDCD10Q9BUL8 212 aa10.02□□□□□ -0.8
CLIP1-208ENST00000537004 FXYD6Q9H0Q3 95 aa10.02□□□□□ -0.8
CLIP1-208ENST00000537004 DECR2Q9NUI1 292 aa10.02□□□□□ -0.8
CLIP1-208ENST00000537004 DUSP13Q9UII6 198 aa10.02□□□□□ -0.8
CLIP1-208ENST00000537004 FAM25EA8MYX2 175 aa10.02□□□□□ -0.81
CLIP1-208ENST00000537004 MCRIP1C9JLW8 97 aa10.02□□□□□ -0.81
CLIP1-208ENST00000537004 L7N2F9 121 aa10.02□□□□□ -0.81
CLIP1-208ENST00000537004 ARPC5O15511 151 aa10.02□□□□□ -0.81
CLIP1-208ENST00000537004 MPC2O95563 127 aa10.02□□□□□ -0.81
CLIP1-208ENST00000537004 RIPPLY3P57055 190 aa10.02□□□□□ -0.81
CLIP1-208ENST00000537004 TEX261Q6UWH6 196 aa10.02□□□□□ -0.81
CLIP1-208ENST00000537004 NEK7Q8TDX7 302 aa10.02□□□□□ -0.81
CLIP1-208ENST00000537004 FAM168AQ92567 244 aa10.02□□□□□ -0.81
CLIP1-208ENST00000537004 SEC22AQ96IW7 307 aa10.02□□□□□ -0.81
CLIP1-208ENST00000537004 DPCDQ9BVM2 203 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-208ENST00000537004 WDR13Q9H1Z4 485 aa10.02□□□□□ -0.81
CLIP1-208ENST00000537004 U3KQ87 197 aa10.02□□□□□ -0.81
CLIP1-208ENST00000537004 A0A096LNT2 108 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 TRAV14DV4A0A0A6YYC5 116 aa10.01□□□□□ -0.81
CLIP1-208ENST00000537004 RFPL4AA6NLU0 287 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms