RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 ABHD5Q8WTS1 349 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 ZNF799Q96GE5 643 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 SLC35E1Q96K37 410 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 SH3BGRL2Q9UJC5 107 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 WIPI2Q9Y4P8 454 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 MMACHCQ9Y4U1 282 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 YLPM1P49750 1951 aaKnown RBP4.73□□□□□ -1.65
PTPRD-213ENST00000537002 MSGN1A6NI15 193 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 OR7C2O60412 319 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 IGFBP3P17936 291 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-213ENST00000537002 TCTAP57738 103 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 KISS1Q15726 138 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 TMEM164Q5U3C3 297 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 MOB1BQ7L9L4 216 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 RNF2Q99496 336 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 TRBV9A0A0B4J1U6 114 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 DHRS7CA6NNS2 312 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 DEGS1O15121 323 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 CTXN2P0C2S0 81 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 PNLIPP16233 465 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 CDC34P49427 236 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-213ENST00000537002 RPS15P62841 145 aaKnown RBP4.73□□□□□ -1.65
PTPRD-213ENST00000537002 FBXW9Q5XUX1 488 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 LINC00114Q6XXX2 140 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 LHFPL1Q86WI0 220 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 FGF22Q9HCT0 170 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 LIN7CQ9NUP9 197 aaKnown RBP4.73□□□□□ -1.65
PTPRD-213ENST00000537002 HIF1ANQ9NWT6 349 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 CACNG5Q9UF02 275 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 CES1P1Q9UKY3 287 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 H0YIZ8 118 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 CHST1O43916 411 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 LMO1P25800 156 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 NTSR1P30989 418 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 CCR2P41597 374 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 ZNF141Q15928 474 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 Q6ZNB5 142 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 ZCCHC14Q8WYQ9 949 aaKnown RBP4.73□□□□□ -1.65
PTPRD-213ENST00000537002 FOXQ1Q9C009 403 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 RBKSQ9H477 322 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 TBC1D29Q9UFV1 150 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 SCN3AQ9NY46 2000 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 KIAA1671Q9BY89 1806 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 MT-ND6P03923 174 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 OR4D5Q8NGN0 318 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 C10orf35Q96D05 121 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 GNRHR2Q96P88 292 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 BRWD3Q6RI45 1802 aa4.73□□□□□ -1.65
PTPRD-213ENST00000537002 SHISA8B8ZZ34 492 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 CTLA4P16410 223 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 CTGFP29279 349 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 PPOXP50336 477 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 PRSS12P56730 875 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 KIAA0895LQ68EN5 471 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 OR6C3Q9NZP0 311 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 KIR2DS5A0A0G2JLQ3 304 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 A0A0G2JNG1 304 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 KIR2DS3K7RE56 304 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 SEMA4FO95754 770 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 HPRT1P00492 218 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 IL9P15248 144 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 GNG4P50150 75 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 KIR2DS5Q14953 304 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 WDR73Q6P4I2 378 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 TBC1D26Q86UD7 250 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 DMRTC2Q8IXT2 367 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-213ENST00000537002 MRPL43Q8N983 215 aaKnown RBP4.72□□□□□ -1.65
PTPRD-213ENST00000537002 TMEM204Q9BSN7 226 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 MANBALQ9NQG1 85 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 RARRES3Q9UL19 164 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 TEX50A0A1B0GTY4 177 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 SNURFLB1AK76 121 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 RAMP1O60894 148 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 NXPH2O95156 264 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 CFIP05156 583 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 GDF1P27539 372 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 APOBEC3AP31941 199 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-213ENST00000537002 UQCRFS1P47985 274 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 DUSP3P51452 185 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-213ENST00000537002 ZNF774Q6NX45 483 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 LIAT1Q6ZQX7 453 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 NT5CQ8TCD5 201 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 RAB40CQ96S21 281 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 MRPS2Q9Y399 296 aaKnown RBP4.72□□□□□ -1.65
PTPRD-213ENST00000537002 GRIFINA4D1Z8 144 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 APOBEC1P41238 236 aaKnown RBP4.72□□□□□ -1.65
PTPRD-213ENST00000537002 COL10A1Q03692 680 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 ZAR1Q86SH2 424 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 LINC01555Q8NAE3 123 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 OR10G8Q8NGN5 311 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 SPPL3Q8TCT6 385 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 HDAC8Q9BY41 377 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 C5orf66Q9H5L9 145 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 RER1O15258 196 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 MPPED1O15442 326 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 IGHV3-9P01782 118 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 GLB1P16278 677 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 NHLH1Q02575 133 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 FOXF1Q12946 379 aa4.72□□□□□ -1.65
PTPRD-213ENST00000537002 OR8B8Q15620 311 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms