RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 HDDC2Q7Z4H3 204 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 MSRB3Q8IXL7 192 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 UXS1Q8NBZ7 420 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 GPR32P1Q8NGA4 272 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 OR9I1Q8NGQ6 314 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 OR1B1Q8NGR6 318 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 OR1F12Q8NHA8 337 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 C8orf46Q8TAG6 207 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 TCP10LQ8TDR4 215 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 GPR148Q8TDV2 347 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 ADAMTS16Q8TE57 1224 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 CORO2AQ92828 525 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 HIST1H2ACQ93077 130 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 RASD2Q96D21 266 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 SORT1Q99523 831 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 PRSS27Q9BQR3 290 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 ATG101Q9BSB4 218 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 ALG12Q9BV10 488 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 TXNIPQ9H3M7 391 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 IKZF5Q9H5V7 419 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 C1orf123Q9NWV4 160 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 THUMPD1Q9NXG2 353 aaKnown RBP3.92□□□□□ -1.78
CLIP1-207ENST00000536634 CLEC5AQ9NY25 188 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 SLC25A37Q9NYZ2 338 aa3.92□□□□□ -1.78
CLIP1-207ENST00000536634 TSSC4Q9Y5U2 329 aaPredicted RBP3.92□□□□□ -1.78
CLIP1-207ENST00000536634 DNAH11Q96DT5 4516 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 M0R1W7 72 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 SDHDO14521 159 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 IMPA2O14732 288 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 IFNW1P05000 195 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 CTLA4P16410 223 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 B2MP61769 119 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 CDK6Q00534 326 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 CKAP4Q07065 602 aaKnown RBP3.91□□□□□ -1.78
CLIP1-207ENST00000536634 FADDQ13158 208 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 RIPK1Q13546 671 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 SCARB2Q14108 478 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 GK2Q14410 553 aaPredicted RBP3.91□□□□□ -1.78
CLIP1-207ENST00000536634 OR8G1Q15617 311 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 DUSP7Q16829 419 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 WHAMMP3Q1A5X7 153 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 RSPO1Q2MKA7 263 aaPredicted RBP3.91□□□□□ -1.78
CLIP1-207ENST00000536634 LDLRAD2Q5SZI1 272 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 NCR3LG1Q68D85 454 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 REEP3Q6NUK4 255 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 LHFPL4Q7Z7J7 247 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 ADCK1Q86TW2 530 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 SBSPONQ8IVN8 264 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 NKAIN4Q8IVV8 208 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 LRRC75AQ8NAA5 344 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 ZNRF1Q8ND25 227 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 ACOT11Q8WXI4 607 aaPredicted RBP3.91□□□□□ -1.78
CLIP1-207ENST00000536634 H1FXQ92522 213 aaKnown RBP3.91□□□□□ -1.78
CLIP1-207ENST00000536634 GTF2H4Q92759 462 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 APOBEC3DQ96AK3 386 aaPredicted RBP3.91□□□□□ -1.78
CLIP1-207ENST00000536634 SLCO4A1Q96BD0 722 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 ITCHQ96J02 903 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 UQCC2Q9BRT2 126 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 ADAT1Q9BUB4 502 aaKnown RBP3.91□□□□□ -1.78
CLIP1-207ENST00000536634 WDR55Q9H6Y2 383 aaPredicted RBP3.91□□□□□ -1.78
CLIP1-207ENST00000536634 METTL8Q9H825 291 aaKnown RBP3.91□□□□□ -1.78
CLIP1-207ENST00000536634 VIPAS39Q9H9C1 493 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 ELL3Q9HB65 397 aaPredicted RBP3.91□□□□□ -1.78
CLIP1-207ENST00000536634 GPR132Q9UNW8 380 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 NDUFAF1Q9Y375 327 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 HSPG2P98160 4391 aa3.91□□□□□ -1.78
CLIP1-207ENST00000536634 TRAPPC13A5PLN9 417 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 GMNCA6NCL1 334 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 PRORSD1PA6NEY8 169 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 KLLNB2CW77 178 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 IGF2P01344 180 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 IL6P05231 212 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 ACKR3P25106 362 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 TGM4P49221 684 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 RPL14P50914 215 aaKnown RBP3.9□□□□□ -1.79
CLIP1-207ENST00000536634 GMFBP60983 142 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 RPL27P61353 136 aaKnown RBP3.9□□□□□ -1.79
CLIP1-207ENST00000536634 IL5RAQ01344 420 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 ECH1Q13011 328 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 AQP6Q13520 282 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 DGUOKQ16854 277 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 NHLRC3Q5JS37 347 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 STUMQ69YW2 141 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 SLC36A1Q7Z2H8 476 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 WDR86Q86TI4 376 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 NAA40Q86UY6 237 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 MKXQ8IYA7 352 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 MICU2Q8IYU8 434 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 CD177Q8N6Q3 437 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 OR5L1Q8NGL2 311 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 OR6F1Q8NGZ6 308 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 LRRC29Q8WV35 223 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 RFT1Q96AA3 541 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 SGTBQ96EQ0 304 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 DUS3LQ96G46 650 aaKnown RBP3.9□□□□□ -1.79
CLIP1-207ENST00000536634 RBP7Q96R05 134 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 ZBTB18Q99592 522 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 ZNF649Q9BS31 505 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 HCAR1Q9BXC0 346 aa3.9□□□□□ -1.79
CLIP1-207ENST00000536634 GPR61Q9BZJ8 451 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms