RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 FAM90A14PP0C7W9 464 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 FAM90A24PP0C7X0 464 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 GTF2F2P13984 249 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 GZMHP20718 246 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 HTR1DP28221 377 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 GP2P55259 537 aaKnown RBP10□□□□□ -0.81
PRKDC-207ENST00000536483 EMX1Q04741 257 aaPredicted RBP10□□□□□ -0.81
PRKDC-207ENST00000536483 SCN1BQ07699 218 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 TPBGQ13641 420 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 TBCEQ15813 527 aaPredicted RBP10□□□□□ -0.81
PRKDC-207ENST00000536483 SSX2Q16385 188 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 PAN3Q58A45 887 aaKnown RBP10□□□□□ -0.81
PRKDC-207ENST00000536483 OXLD1Q5BKU9 147 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 UBE2UQ5VVX9 321 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 GPR107Q5VW38 600 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 REC114Q7Z4M0 266 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 TRAPPC6BQ86SZ2 158 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 OR10K1Q8NGX5 313 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 PHYHIPQ92561 330 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 OR5M11Q96RB7 305 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 NKX3-1Q99801 234 aaPredicted RBP10□□□□□ -0.81
PRKDC-207ENST00000536483 PPIL3Q9H2H8 161 aaKnown RBP10□□□□□ -0.81
PRKDC-207ENST00000536483 SPACA1Q9HBV2 294 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 DPM3Q9P2X0 92 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 PITPNC1Q9UKF7 332 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 ING4Q9UNL4 249 aa10□□□□□ -0.81
PRKDC-207ENST00000536483 KMT2CQ8NEZ4 4911 aaKnown RBP10□□□□□ -0.81
PRKDC-207ENST00000536483 MEX3AA1L020 520 aaKnown RBP9.99□□□□□ -0.81
PRKDC-207ENST00000536483 OOSP1A8MZH6 123 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 H3BMQ9 156 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 H3BUI4 141 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 GEMIN2O14893 280 aaKnown RBP9.99□□□□□ -0.81
PRKDC-207ENST00000536483 SLC22A1O15245 554 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 CHST1O43916 411 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 IL1AP01583 271 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 GDNFP39905 211 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 ATXN7L3Q14CW9 347 aaPredicted RBP9.99□□□□□ -0.81
PRKDC-207ENST00000536483 NSUN5P1Q3KNT7 163 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 ACSM3Q53FZ2 586 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 PRAMEF5Q5TYX0 476 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 CCBE1Q6UXH8 406 aaPredicted RBP9.99□□□□□ -0.81
PRKDC-207ENST00000536483 CROCCP3Q8IVE0 287 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 SUMF2Q8NBJ7 301 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 OR4D6Q8NGJ1 314 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 OR13A1Q8NGR1 328 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 PLPPR1Q8TBJ4 325 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 MRAPQ8TCY5 172 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 SGCDQ92629 289 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 KIRREL1Q96J84 757 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 S100A13Q99584 98 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 DPCDQ9BVM2 203 aaPredicted RBP9.99□□□□□ -0.81
PRKDC-207ENST00000536483 NPFFR1Q9GZQ6 430 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 ACOT13Q9NPJ3 140 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 KIF25Q9UIL4 384 aa9.99□□□□□ -0.81
PRKDC-207ENST00000536483 DNAH3Q8TD57 4116 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 MEIKINA0A087WXM9 373 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 LEUTXA8MZ59 168 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 BUB1B-PAK6H3BSN5 160 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 OR7C1O76099 320 aaPredicted RBP9.98□□□□□ -0.81
PRKDC-207ENST00000536483 GABARAPO95166 117 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 UCHL1P09936 223 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 PRRX1P54821 245 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 HABP2Q14520 560 aaPredicted RBP9.98□□□□□ -0.81
PRKDC-207ENST00000536483 HLA-DRB5Q30154 266 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 Q3ZCU0 254 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 C1orf100Q5SVJ3 147 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 GLIPR1L1Q6UWM5 242 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 BAIAP2L2Q6UXY1 529 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 C16orf82Q7Z2V1 217 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 LRRTM1Q86UE6 522 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 C8orf31Q8N9H6 132 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 OR52M1Q8NGK5 317 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 OR9G1Q8NH87 305 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 CCDC90BQ9GZT6 254 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 ZNF286AQ9HBT8 521 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 CALYQ9NYX4 217 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 ZNF581Q9P0T4 197 aa9.98□□□□□ -0.81
PRKDC-207ENST00000536483 MRPS28Q9Y2Q9 187 aaKnown RBP9.98□□□□□ -0.81
PRKDC-207ENST00000536483 PNMA8CA0A1B0GUJ8 204 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 A0A1W2PP11 408 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 A0A1W2PPK0 400 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 C15orf65H3BRN8 121 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 ORC5O43913 435 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 FBXO24O75426 580 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 CA11O75493 328 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 MT-ND4P03905 459 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 MAS1P04201 325 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 UBBP0CG47 229 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 CD28P10747 220 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 SERPINA2P20848 420 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 CALRP27797 417 aaKnown RBP9.97□□□□□ -0.81
PRKDC-207ENST00000536483 CEACAM3P40198 252 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 RAB13P51153 203 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 TRAM1Q15629 374 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 SLC22A6Q4U2R8 563 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 PLA1AQ53H76 456 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 ZNF497Q6ZNH5 498 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 JAGN1Q8N5M9 183 aa9.97□□□□□ -0.81
PRKDC-207ENST00000536483 WIPF2Q8TF74 440 aaPredicted RBP9.97□□□□□ -0.81
PRKDC-207ENST00000536483 R3HDM4Q96D70 268 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms