RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	FAM210B	Q96KR6	192 aa		3.38	□□□□□ -1.87
ATM-223	ENST00000533979	APOL4	Q9BPW4	351 aa		3.38	□□□□□ -1.87
ATM-223	ENST00000533979	DDA1	Q9BW61	102 aa		3.38	□□□□□ -1.87
ATM-223	ENST00000533979	SLIRP	Q9GZT3	109 aa	Known RBP	3.38	□□□□□ -1.87
ATM-223	ENST00000533979	ZNF702P	Q9H963	129 aa		3.38	□□□□□ -1.87
ATM-223	ENST00000533979	BABAM2	Q9NXR7	383 aa		3.38	□□□□□ -1.87
ATM-223	ENST00000533979	SMPX	Q9UHP9	88 aa		3.38	□□□□□ -1.87
ATM-223	ENST00000533979	TBX21	Q9UL17	535 aa		3.38	□□□□□ -1.87
ATM-223	ENST00000533979	SLC7A11	Q9UPY5	501 aa		3.38	□□□□□ -1.87
ATM-223	ENST00000533979	PSG11	Q9UQ72	335 aa		3.38	□□□□□ -1.87
ATM-223	ENST00000533979	NDUFAF1	Q9Y375	327 aa		3.38	□□□□□ -1.87
ATM-223	ENST00000533979	PRELID3B	Q9Y3B1	194 aa		3.38	□□□□□ -1.87
ATM-223	ENST00000533979	CHD9	Q3L8U1	2897 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	MYO9A	B2RTY4	2548 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	TRAV8-4	A0A0B4J246	113 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	3.37	□□□□□ -1.87
ATM-223	ENST00000533979	TXNDC9	O14530	226 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	XKRY	O14609	159 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	SLC22A1	O15245	554 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	SLC16A4	O15374	487 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	FABP7	O15540	132 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	PHF1	O43189	567 aa	Predicted RBP	3.37	□□□□□ -1.87
ATM-223	ENST00000533979	CHP2	O43745	196 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	FADS1	O60427	444 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	HPGDS	O60760	199 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	SERF1A	O75920	110 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	CTDNEP1	O95476	244 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	IFNA21	P01568	189 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979		P01737	135 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	HLA-A	P01891	365 aa	Known RBP	3.37	□□□□□ -1.87
ATM-223	ENST00000533979	PPBP	P02775	128 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	TCRB	P04435	133 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	NBEAP1	P0C6P0	100 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	SLC35G6	P0C7Q6	338 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	NQO1	P15559	274 aa	Known RBP	3.37	□□□□□ -1.87
ATM-223	ENST00000533979	CD1E	P15812	388 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	RCC1	P18754	421 aa	Predicted RBP	3.37	□□□□□ -1.87
ATM-223	ENST00000533979	OR3A4P	P47883	348 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	CYB561	P49447	251 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	ZNF138	P52744	262 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	RAB38	P57729	211 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	RAB8A	P61006	207 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	RPS23	P62266	143 aa	Known RBP	3.37	□□□□□ -1.87
ATM-223	ENST00000533979	RBX1	P62877	108 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	CACNG7	P62955	275 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	AES	Q08117	197 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	PRPSAP1	Q14558	356 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	TAF1A	Q15573	450 aa	Predicted RBP	3.37	□□□□□ -1.87
ATM-223	ENST00000533979	C15orf32	Q32M92	178 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	CEACAM21	Q3KPI0	293 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	TIMM50	Q3ZCQ8	353 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	LRRC10	Q5BKY1	277 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	SYT6	Q5T7P8	510 aa	Predicted RBP	3.37	□□□□□ -1.87
ATM-223	ENST00000533979	FAM45BP	Q6NSW5	357 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	MED27	Q6P2C8	311 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	PAMR1	Q6UXH9	720 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	CYHR1	Q6ZMK1	362 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	CALHM1	Q8IU99	346 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	OR10G9	Q8NGN4	311 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	OR51Q1	Q8NH59	317 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	PIGX	Q8TBF5	258 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	SYNPR	Q8TBG9	265 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	NT5C	Q8TCD5	201 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	BLOC1S5	Q8TDH9	187 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	C7orf33	Q8WU49	177 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	RXFP2	Q8WXD0	754 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	PPWD1	Q96BP3	646 aa	Known RBP	3.37	□□□□□ -1.87
ATM-223	ENST00000533979	TAMM41	Q96BW9	452 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	AURKB	Q96GD4	344 aa	Predicted RBP	3.37	□□□□□ -1.87
ATM-223	ENST00000533979	RDH12	Q96NR8	316 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	PPP1R2P1	Q96PQ5	205 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	HOPX	Q9BPY8	73 aa	Predicted RBP	3.37	□□□□□ -1.87
ATM-223	ENST00000533979	SULT4A1	Q9BR01	284 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	SLC19A3	Q9BZV2	496 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	OR11A1	Q9GZK7	315 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	ZNF430	Q9H8G1	570 aa	Predicted RBP	3.37	□□□□□ -1.87
ATM-223	ENST00000533979	DDX19A	Q9NUU7	478 aa	Known RBP	3.37	□□□□□ -1.87
ATM-223	ENST00000533979	VNN3	Q9NY84	501 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	TMEM9	Q9P0T7	183 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	VAX2	Q9UIW0	290 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	NEUROG3	Q9Y4Z2	214 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	NUBP2	Q9Y5Y2	271 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	F11R	Q9Y624	299 aa	Known RBP	3.37	□□□□□ -1.87
ATM-223	ENST00000533979	ITPR3	Q14573	2671 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	LAMA4	Q16363	1823 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	CNOT1	A5YKK6	2376 aa	Known RBP	3.37	□□□□□ -1.87
ATM-223	ENST00000533979	NBEA	Q8NFP9	2946 aa		3.37	□□□□□ -1.87
ATM-223	ENST00000533979	CEP250	Q9BV73	2442 aa		3.36	□□□□□ -1.87
ATM-223	ENST00000533979	FRY	Q5TBA9	3013 aa		3.36	□□□□□ -1.87
ATM-223	ENST00000533979	IGLV3-10	A0A075B6K4	115 aa		3.36	□□□□□ -1.87
ATM-223	ENST00000533979		A0A1B0GV90	55 aa		3.36	□□□□□ -1.87
ATM-223	ENST00000533979	PQLC2L	A1A4F0	135 aa		3.36	□□□□□ -1.87
ATM-223	ENST00000533979	SRRM5	B3KS81	715 aa		3.36	□□□□□ -1.87
ATM-223	ENST00000533979		H0Y980	276 aa		3.36	□□□□□ -1.87
ATM-223	ENST00000533979		M0QZ92	97 aa		3.36	□□□□□ -1.87
ATM-223	ENST00000533979	CCRL2	O00421	344 aa		3.36	□□□□□ -1.87
ATM-223	ENST00000533979	ARPC5	O15511	151 aa		3.36	□□□□□ -1.87
ATM-223	ENST00000533979	SYNGR1	O43759	233 aa		3.36	□□□□□ -1.87
ATM-223	ENST00000533979	PTH	P01270	115 aa		3.36	□□□□□ -1.87
ATM-223	ENST00000533979	FAM228B	P0C875	321 aa		3.36	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms