RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 FAM90A12PA8MX19 464 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 FAM90A5PA8MXJ8 464 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 SNRNP70P08621 437 aaKnown RBP7.65□□□□□ -1.18
SSBP3-215ENST00000533946 CSF1P09603 554 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 FAM90A15PP0C7V4 464 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 FAM90A13PP0C7W8 464 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 FAM90A14PP0C7W9 464 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 FAM90A24PP0C7X0 464 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 RPS25P62851 125 aaKnown RBP7.65□□□□□ -1.18
SSBP3-215ENST00000533946 PPP3R1P63098 170 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 SLC35A2P78381 396 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 UNC119Q13432 240 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 ACSM3Q53FZ2 586 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 YIF1BQ5BJH7 314 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 ZNF497Q6ZNH5 498 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 LCNL1Q6ZST4 164 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 ZNF329Q86UD4 541 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 CAPSLQ8WWF8 208 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 ARL11Q969Q4 196 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 SULT4A1Q9BR01 284 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 NICN1Q9BSH3 213 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 SELENOIQ9C0D9 397 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 GAL3ST2Q9H3Q3 398 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 RANBP3Q9H6Z4 567 aaPredicted RBP7.65□□□□□ -1.18
SSBP3-215ENST00000533946 IL36GQ9NZH8 169 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 CNOT2Q9NZN8 540 aaKnown RBP7.65□□□□□ -1.18
SSBP3-215ENST00000533946 RCC2Q9P258 522 aaKnown RBP7.65□□□□□ -1.18
SSBP3-215ENST00000533946 HSPE1-MOB4S4R3N1 261 aa7.65□□□□□ -1.18
SSBP3-215ENST00000533946 SHISA3A0PJX4 238 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 LEUTXA8MZ59 168 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 TOR1AO14656 332 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 MAGEB3O15480 346 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 FBXO24O75426 580 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 CD2P06729 351 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 MGMTP16455 207 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 FSTP19883 344 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 HTR2CP28335 458 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 VDAC2P45880 294 aaPredicted RBP7.64□□□□□ -1.19
SSBP3-215ENST00000533946 QRFPP83859 136 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 GABPB1Q06547 395 aaPredicted RBP7.64□□□□□ -1.19
SSBP3-215ENST00000533946 P2RY14Q15391 338 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 BEAN1Q3B7T3 259 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 CT45A1Q5HYN5 189 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 NHLRC3Q5JS37 347 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 C9orf152Q5JTZ5 239 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 SYT6Q5T7P8 510 aaPredicted RBP7.64□□□□□ -1.19
SSBP3-215ENST00000533946 LIPKQ5VXJ0 399 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 AWAT2Q6E213 333 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 RAB12Q6IQ22 244 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 Q6ZTK2 550 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 PRR18Q8N4B5 295 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 ZNF439Q8NDP4 499 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 OR5AU1Q8NGC0 362 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 OR52L2PQ8NGH6 319 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 OR9G1Q8NH87 305 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 CT45A3Q8NHU0 189 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 ST6GALNAC6Q969X2 333 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 Q96M66 194 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 RBM14Q96PK6 669 aaKnown RBP7.64□□□□□ -1.19
SSBP3-215ENST00000533946 HDHD3Q9BSH5 251 aaPredicted RBP7.64□□□□□ -1.19
SSBP3-215ENST00000533946 PRSS22Q9GZN4 317 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 IFT22Q9H7X7 185 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 DCLRE1BQ9H816 532 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 RHOFQ9HBH0 211 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 OR6C3Q9NZP0 311 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 PEX16Q9Y5Y5 336 aa7.64□□□□□ -1.19
SSBP3-215ENST00000533946 TMEM30CPA0ZSE6 113 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 MYL12BO14950 172 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 CRTAPO75718 401 aaPredicted RBP7.63□□□□□ -1.19
SSBP3-215ENST00000533946 SC5DO75845 299 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 IGKV1D-33P01593 117 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 IGKV1-33P01594 117 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 CSTBP04080 98 aaKnown RBP7.63□□□□□ -1.19
SSBP3-215ENST00000533946 VSIG8P0DPA2 414 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 F2RL1P55085 397 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 CLDN12P56749 244 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 LINC00205P59089 165 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 CD83Q01151 205 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 MED22Q15528 200 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 OR52W1Q6IF63 320 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 C6orf201Q7Z4U5 140 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 CEACAM19Q7Z692 300 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 ZNF596Q8TC21 504 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 MRPL30Q8TCC3 161 aaKnown RBP7.63□□□□□ -1.19
SSBP3-215ENST00000533946 NEK7Q8TDX7 302 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 FAAP24Q9BTP7 215 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 BARHL1Q9BZE3 327 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 DUSP21Q9H596 190 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 PLSCR3Q9NRY6 295 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 CHCHD3Q9NX63 227 aaKnown RBP7.63□□□□□ -1.19
SSBP3-215ENST00000533946 GFOD1Q9NXC2 390 aa7.63□□□□□ -1.19
SSBP3-215ENST00000533946 A0A0B4J203 849 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 IGHV1-3A0A0C4DH29 117 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 IRGMA1A4Y4 181 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 AIPO00170 330 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 SDCBPO00560 298 aaPredicted RBP7.62□□□□□ -1.19
SSBP3-215ENST00000533946 OR2F2O95006 317 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 MPIG6BO95866 241 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 HBZP02008 142 aa7.62□□□□□ -1.19
SSBP3-215ENST00000533946 OPN1MWP04001 364 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms