RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ZNF610Q8N9Z0 462 aa16.63■□□□□ 0.25
CAPN1-226ENST00000533820 HIST1H2BHQ93079 126 aa16.63■□□□□ 0.25
CAPN1-226ENST00000533820 HIST1H2BNQ99877 126 aa16.63■□□□□ 0.25
CAPN1-226ENST00000533820 HIST1H2BMQ99879 126 aa16.63■□□□□ 0.25
CAPN1-226ENST00000533820 SMCO3A2RU48 225 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 CBR3O75828 277 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 BCL3P20749 454 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 VAMP2P63027 116 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 LYSMD4Q5XG99 296 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 CCDC71LQ8N9Z2 235 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 OR1J1Q8NGS3 322 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 SAP25Q8TEE9 199 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 MALSU1Q96EH3 234 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 DUSP23Q9BVJ7 150 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 IGKV1D-13A0A0B4J2D9 117 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 hCG_38984A0A1B0GV85 526 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 H0YL77 283 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 TCF21O43680 179 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 IGKV1-13P0DP09 117 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 RAC3P60763 192 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 IGFBP7Q16270 282 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 ZNF818PQ6ZRF7 136 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 LRP11Q86VZ4 500 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 OR10D3Q8NH80 312 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 GLRX2Q9NS18 164 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 NCKAP5O14513 1909 aa16.62■□□□□ 0.25
CAPN1-226ENST00000533820 GPM6AP51674 278 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 FUT6P51993 359 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 HEPN1Q6WQI6 88 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 OR4D5Q8NGN0 318 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 R3HDM4Q96D70 268 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 TMED3Q9Y3Q3 217 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 NBEAQ8NFP9 2946 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 C9J4A7 227 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 K7N7A8 449 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 RPS23P62266 143 aaKnown RBP16.61■□□□□ 0.25
CAPN1-226ENST00000533820 ZNF154Q13106 437 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 EIF3IQ13347 325 aaKnown RBP16.61■□□□□ 0.25
CAPN1-226ENST00000533820 OR56B2PQ8NGI1 322 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 TUBA4BQ9H853 241 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 CACNA1DQ01668 2161 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 NCOR1O75376 2440 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 OR6C6A6NF89 314 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 PATE3B3GLJ2 98 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 TMEM50AO95807 157 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 CST2P09228 141 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 S100A7P31151 101 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 DYNLT3P51808 116 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 SLC10A1Q14973 349 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 DAZAP2Q15038 168 aaPredicted RBP16.61■□□□□ 0.25
CAPN1-226ENST00000533820 OR2T2Q6IF00 324 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 MYPOPQ86VE0 399 aaPredicted RBP16.61■□□□□ 0.25
CAPN1-226ENST00000533820 CCL28Q9NRJ3 127 aa16.61■□□□□ 0.25
CAPN1-226ENST00000533820 K7ESF4 209 aa16.6■□□□□ 0.25
CAPN1-226ENST00000533820 CEACAM6P40199 344 aa16.6■□□□□ 0.25
CAPN1-226ENST00000533820 HNF4GQ14541 408 aa16.6■□□□□ 0.25
CAPN1-226ENST00000533820 TMEM252Q8N6L7 170 aa16.6■□□□□ 0.25
CAPN1-226ENST00000533820 UBALD1Q8TB05 177 aa16.6■□□□□ 0.25
CAPN1-226ENST00000533820 ZNF488Q96MN9 340 aa16.6■□□□□ 0.25
CAPN1-226ENST00000533820 TMEM222Q9H0R3 208 aa16.6■□□□□ 0.25
CAPN1-226ENST00000533820 STRAPQ9Y3F4 350 aaKnown RBP16.6■□□□□ 0.25
CAPN1-226ENST00000533820 TRDCB7Z8K6 153 aa16.6■□□□□ 0.25
CAPN1-226ENST00000533820 PROB1E7EW31 1015 aa16.6■□□□□ 0.25
CAPN1-226ENST00000533820 P04436 131 aa16.6■□□□□ 0.25
CAPN1-226ENST00000533820 ARSJQ5FYB0 599 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-226ENST00000533820 Q6ZSR3 168 aa16.6■□□□□ 0.25
CAPN1-226ENST00000533820 LRTM2Q8N967 370 aa16.6■□□□□ 0.25
CAPN1-226ENST00000533820 TRAV39A0A0B4J263 110 aa16.59■□□□□ 0.25
CAPN1-226ENST00000533820 RBFOX3A6NFN3 312 aa16.59■□□□□ 0.25
CAPN1-226ENST00000533820 ZNF716A6NP11 495 aa16.59■□□□□ 0.25
CAPN1-226ENST00000533820 RND3P61587 244 aa16.59■□□□□ 0.25
CAPN1-226ENST00000533820 ZNF816-ZNF321PA0A0X1KG74 233 aa16.59■□□□□ 0.25
CAPN1-226ENST00000533820 HLA-HP01893 362 aa16.59■□□□□ 0.25
CAPN1-226ENST00000533820 TRGC2P03986 189 aa16.59■□□□□ 0.25
CAPN1-226ENST00000533820 MMP7P09237 267 aaPredicted RBP16.59■□□□□ 0.25
CAPN1-226ENST00000533820 PAX1P15863 534 aa16.59■□□□□ 0.25
CAPN1-226ENST00000533820 TDGF1P3P51864 188 aa16.59■□□□□ 0.25
CAPN1-226ENST00000533820 FOXG1P55316 489 aaPredicted RBP16.59■□□□□ 0.25
CAPN1-226ENST00000533820 C16orf54Q6UWD8 224 aa16.59■□□□□ 0.25
CAPN1-226ENST00000533820 GGNQ86UU5 652 aa16.59■□□□□ 0.25
CAPN1-226ENST00000533820 COMMD1Q8N668 190 aa16.59■□□□□ 0.25
CAPN1-226ENST00000533820 AGBL5Q8NDL9 886 aa16.59■□□□□ 0.25
CAPN1-226ENST00000533820 OR51H1Q8NH63 302 aa16.59■□□□□ 0.25
CAPN1-226ENST00000533820 H3BQ15 152 aa16.59■□□□□ 0.25
CAPN1-226ENST00000533820 TK1P04183 234 aa16.59■□□□□ 0.25
CAPN1-226ENST00000533820 FGF7P21781 194 aa16.59■□□□□ 0.25
CAPN1-226ENST00000533820 TAGLN2P37802 199 aaKnown RBP16.59■□□□□ 0.25
CAPN1-226ENST00000533820 B3GALT5-AS1P59052 145 aa16.59■□□□□ 0.25
CAPN1-226ENST00000533820 EXT1Q16394 746 aa16.59■□□□□ 0.25
CAPN1-226ENST00000533820 GPR35Q9HC97 309 aa16.59■□□□□ 0.25
CAPN1-226ENST00000533820 MRPS18CQ9Y3D5 142 aaKnown RBP16.59■□□□□ 0.25
CAPN1-226ENST00000533820 LOC102723996A0A087X1L8 192 aa16.58■□□□□ 0.24
CAPN1-226ENST00000533820 M0R143 59 aa16.58■□□□□ 0.24
CAPN1-226ENST00000533820 HSPA12AO43301 675 aa16.58■□□□□ 0.24
CAPN1-226ENST00000533820 CHST1O43916 411 aa16.58■□□□□ 0.24
CAPN1-226ENST00000533820 TLE1Q04724 770 aa16.58■□□□□ 0.24
CAPN1-226ENST00000533820 TMEM42Q69YG0 159 aa16.58■□□□□ 0.24
CAPN1-226ENST00000533820 CPT1CQ8TCG5 803 aa16.58■□□□□ 0.24
CAPN1-226ENST00000533820 GPR179Q6PRD1 2367 aa16.58■□□□□ 0.24
CAPN1-226ENST00000533820 IGHV3-64DA0A0J9YX35 117 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms