RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 TRAV41A0A0B4J266 112 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 CYB5AP00167 134 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 IGHV3-11P01762 117 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 ATF1P18846 271 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 BLVRBP30043 206 aaPredicted RBP9.36□□□□□ -0.91
SVIP-205ENST00000533774 NDPQ00604 133 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 IL34Q6ZMJ4 242 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 SLC16A12Q6ZSM3 486 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 HDXQ7Z353 690 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 SLC35F2Q8IXU6 374 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 PRSS35Q8N3Z0 413 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 SVOPQ8N4V2 548 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 LINC00311Q8N616 119 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 YIPF7Q8N8F6 280 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 ZNF565Q8N9K5 539 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 CHST4Q8NCG5 386 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 OR8H1Q8NGG4 311 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 GIPC3Q8TF64 312 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 CNN2Q99439 309 aaKnown RBP9.36□□□□□ -0.91
SVIP-205ENST00000533774 RSRP1Q9BUV0 290 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 NCOR1P1Q9H4R4 102 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 CCDC134Q9H6E4 229 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 TUBA4BQ9H853 241 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 ADGRL4Q9HBW9 690 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 PARP11Q9NR21 331 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 ZNF581Q9P0T4 197 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 PKHD1P08F94 4074 aa9.36□□□□□ -0.91
SVIP-205ENST00000533774 LOC107986453A0A1B0GWG9 222 aa9.35□□□□□ -0.91
SVIP-205ENST00000533774 IZUMO1RA6ND01 250 aa9.35□□□□□ -0.91
SVIP-205ENST00000533774 C21orf33P30042 268 aaPredicted RBP9.35□□□□□ -0.91
SVIP-205ENST00000533774 ANKRD13BQ86YJ7 626 aa9.35□□□□□ -0.91
SVIP-205ENST00000533774 HS3ST5Q8IZT8 346 aa9.35□□□□□ -0.91
SVIP-205ENST00000533774 PGAM4Q8N0Y7 254 aa9.35□□□□□ -0.91
SVIP-205ENST00000533774 OR10A7Q8NGE5 316 aa9.35□□□□□ -0.91
SVIP-205ENST00000533774 MBOAT4Q96T53 435 aa9.35□□□□□ -0.91
SVIP-205ENST00000533774 ST6GALNAC5Q9BVH7 336 aa9.35□□□□□ -0.91
SVIP-205ENST00000533774 CEPT1Q9Y6K0 416 aa9.35□□□□□ -0.91
SVIP-205ENST00000533774 IGHV3-43A0A0B4J1X8 118 aa9.34□□□□□ -0.91
SVIP-205ENST00000533774 H0YJX3 145 aa9.34□□□□□ -0.91
SVIP-205ENST00000533774 M0R129 80 aa9.34□□□□□ -0.91
SVIP-205ENST00000533774 CCDC22O60826 627 aa9.34□□□□□ -0.91
SVIP-205ENST00000533774 SERPINA3P01011 423 aa9.34□□□□□ -0.91
SVIP-205ENST00000533774 HSPB1P04792 205 aaKnown RBP9.34□□□□□ -0.91
SVIP-205ENST00000533774 IGHV3-43DP0DP04 118 aa9.34□□□□□ -0.91
SVIP-205ENST00000533774 OSMP13725 252 aa9.34□□□□□ -0.91
SVIP-205ENST00000533774 PAN3Q58A45 887 aaKnown RBP9.34□□□□□ -0.91
SVIP-205ENST00000533774 PP6455Q8WZ26 134 aa9.34□□□□□ -0.91
SVIP-205ENST00000533774 OPALINQ96PE5 141 aa9.34□□□□□ -0.91
SVIP-205ENST00000533774 SLC25A19Q9HC21 320 aa9.34□□□□□ -0.91
SVIP-205ENST00000533774 FAM53CQ9NYF3 392 aa9.34□□□□□ -0.91
SVIP-205ENST00000533774 TVP23BQ9NYZ1 205 aa9.34□□□□□ -0.91
SVIP-205ENST00000533774 MRPS28Q9Y2Q9 187 aaKnown RBP9.34□□□□□ -0.91
SVIP-205ENST00000533774 DYNC1H1Q14204 4646 aaKnown RBP9.34□□□□□ -0.91
SVIP-205ENST00000533774 DNAH17Q9UFH2 4485 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 FAT2Q9NYQ8 4349 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 A0A1W2PN81 502 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 ZNF670-ZNF695F2Z2N8 137 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 C15orf65H3BRN8 121 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 PRKYO43930 277 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 RGS11O94810 467 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 HLA-DRB1P01911 266 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 CHRNA7P36544 502 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 ZNF134P52741 427 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 EWSR1Q01844 656 aaKnown RBP eCLIP9.33□□□□□ -0.92
SVIP-205ENST00000533774 MMDQ15546 238 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 ECSCRQ19T08 205 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 UTS2BQ765I0 119 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 OR10AC1Q8NH08 325 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 CNIH3Q8TBE1 160 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 FGGYQ96C11 551 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 CMTM5Q96DZ9 223 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 NR1H4Q96RI1 486 aaPredicted RBP9.33□□□□□ -0.92
SVIP-205ENST00000533774 TBX5Q99593 518 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 ELOVL1Q9BW60 279 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 ANKRD60Q9BZ19 345 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 PLEKHA3Q9HB20 300 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 KRT84Q9NSB2 600 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 CLN6Q9NWW5 311 aa9.33□□□□□ -0.92
SVIP-205ENST00000533774 EGR2P11161 476 aaPredicted RBP9.32□□□□□ -0.92
SVIP-205ENST00000533774 PRKACGP22612 351 aa9.32□□□□□ -0.92
SVIP-205ENST00000533774 PRKACBP22694 351 aa9.32□□□□□ -0.92
SVIP-205ENST00000533774 LORP23490 312 aaPredicted RBP9.32□□□□□ -0.92
SVIP-205ENST00000533774 ACTR3P61158 418 aa9.32□□□□□ -0.92
SVIP-205ENST00000533774 PAX5Q02548 391 aa9.32□□□□□ -0.92
SVIP-205ENST00000533774 LSAMPQ13449 338 aa9.32□□□□□ -0.92
SVIP-205ENST00000533774 PMS2P11Q13670 270 aa9.32□□□□□ -0.92
SVIP-205ENST00000533774 SAXO1Q8IYX7 474 aa9.32□□□□□ -0.92
SVIP-205ENST00000533774 C8orf31Q8N9H6 132 aa9.32□□□□□ -0.92
SVIP-205ENST00000533774 ZNF439Q8NDP4 499 aa9.32□□□□□ -0.92
SVIP-205ENST00000533774 FLYWCH2Q96CP2 140 aaKnown RBP9.32□□□□□ -0.92
SVIP-205ENST00000533774 C10orf35Q96D05 121 aa9.32□□□□□ -0.92
SVIP-205ENST00000533774 RHOVQ96L33 236 aa9.32□□□□□ -0.92
SVIP-205ENST00000533774 ADI1Q9BV57 179 aa9.32□□□□□ -0.92
SVIP-205ENST00000533774 MAGIXQ9H6Y5 334 aa9.32□□□□□ -0.92
SVIP-205ENST00000533774 CHCHD3Q9NX63 227 aaKnown RBP9.32□□□□□ -0.92
SVIP-205ENST00000533774 GFOD1Q9NXC2 390 aa9.32□□□□□ -0.92
SVIP-205ENST00000533774 ADAM30Q9UKF2 790 aa9.32□□□□□ -0.92
SVIP-205ENST00000533774 SDCBPO00560 298 aaPredicted RBP9.31□□□□□ -0.92
SVIP-205ENST00000533774 PRDX6P30041 224 aa9.31□□□□□ -0.92
SVIP-205ENST00000533774 ZNF137PP52743 207 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms