RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 HIKESHIQ53FT3 197 aa10.7□□□□□ -0.7
BDNF-218ENST00000533246 ERGIC1Q969X5 290 aa10.7□□□□□ -0.7
BDNF-218ENST00000533246 R3HDM4Q96D70 268 aa10.7□□□□□ -0.7
BDNF-218ENST00000533246 SMIM12Q96EX1 92 aa10.7□□□□□ -0.7
BDNF-218ENST00000533246 CLEC5AQ9NY25 188 aa10.7□□□□□ -0.7
BDNF-218ENST00000533246 ZNF391Q9UJN7 358 aa10.7□□□□□ -0.7
BDNF-218ENST00000533246 ZNF236Q9UL36 1845 aa10.7□□□□□ -0.7
BDNF-218ENST00000533246 IGLV1-36A0A0B4J1U3 117 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 SPAARA0A1B0GVQ0 90 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 KLF4O43474 513 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 TRGC2P03986 189 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 LIFP15018 202 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 RPS4Y1P22090 263 aaKnown RBP10.69□□□□□ -0.7
BDNF-218ENST00000533246 CEACAM6P40199 344 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 UBE2G2P60604 165 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 TMEM267Q0VDI3 215 aaPredicted RBP10.69□□□□□ -0.7
BDNF-218ENST00000533246 OR10P1Q8NGE3 313 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 PINX1Q96BK5 328 aaKnown RBP10.69□□□□□ -0.7
BDNF-218ENST00000533246 MS4A10Q96PG2 267 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 VSIG4Q9Y279 399 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 XKRY2A2RUG3 117 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 TOX3O15405 576 aaPredicted RBP10.69□□□□□ -0.7
BDNF-218ENST00000533246 OPN1MWP04001 364 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 OPN1MW2P0DN77 364 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 OPN1MW3P0DN78 364 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 PSMB3P49720 205 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 SOX8P57073 446 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 LYZL2Q7Z4W2 148 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 RGP1Q92546 391 aaPredicted RBP10.69□□□□□ -0.7
BDNF-218ENST00000533246 GALMQ96C23 342 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 ADGRG7Q96K78 797 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 ATP23Q9Y6H3 246 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 SBF1O95248 1867 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 ITGB1BP1O14713 200 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 MUC1P15941 1255 aaPredicted RBP10.69□□□□□ -0.7
BDNF-218ENST00000533246 GABRA4P48169 554 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 FAM210BQ96KR6 192 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 CITED1Q99966 193 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 FKBP11Q9NYL4 201 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 AMDHD2Q9Y303 409 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 PSME4Q14997 1843 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 MGAMO43451 1857 aa10.69□□□□□ -0.7
BDNF-218ENST00000533246 LOC101059948A0A1B0GTJ6 334 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 FIGNL2A6NMB9 653 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 PRRG2O14669 202 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 MDKP21741 143 aaPredicted RBP10.68□□□□□ -0.7
BDNF-218ENST00000533246 DVL1P1P54792 670 aaPredicted RBP10.68□□□□□ -0.7
BDNF-218ENST00000533246 LSM6P62312 80 aaKnown RBP10.68□□□□□ -0.7
BDNF-218ENST00000533246 RANP62826 216 aaKnown RBP10.68□□□□□ -0.7
BDNF-218ENST00000533246 GGTLC2Q14390 218 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 EIF4E3Q8N5X7 224 aaKnown RBP10.68□□□□□ -0.7
BDNF-218ENST00000533246 OR4F5Q8NH21 305 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 IP6K3Q96PC2 410 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 OR4F4Q96R69 305 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 RTN4RQ9BZR6 473 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 RAB18Q9NP72 206 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 RAB9BQ9NP90 201 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 GPR27Q9NS67 375 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 ZNF586Q9NXT0 402 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 BET1LQ9NYM9 111 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 HS3ST3B1Q9Y662 390 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 A0A1W2PR77 199 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 MGST1P10620 155 aaKnown RBP10.68□□□□□ -0.7
BDNF-218ENST00000533246 SCAND1P57086 179 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 HES1Q14469 280 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 JMJD6Q6NYC1 403 aaPredicted RBP10.68□□□□□ -0.7
BDNF-218ENST00000533246 FAM216AQ8WUB2 273 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 ZNF71Q9NQZ8 489 aaPredicted RBP10.68□□□□□ -0.7
BDNF-218ENST00000533246 OSGIN2Q9Y236 505 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 PLCE1Q9P212 2302 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 IGKV1D-43A0A0B4J1Z2 117 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 RPL24P83731 157 aaKnown RBP10.68□□□□□ -0.7
BDNF-218ENST00000533246 LDLRAD2Q5SZI1 272 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 M1APQ8TC57 530 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 CLDN23Q96B33 292 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 MSI2Q96DH6 328 aaKnown RBP10.68□□□□□ -0.7
BDNF-218ENST00000533246 CACNG5Q9UF02 275 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 IGKV3-11P04433 115 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 STARD6P59095 220 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 ERVFRD-1P60508 538 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 TRIP6Q15654 476 aaKnown RBP10.68□□□□□ -0.7
BDNF-218ENST00000533246 ZNF787Q6DD87 383 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 Q6ZN92 141 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 MRGPRDQ8TDS7 321 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 GNPNAT1Q96EK6 184 aaPredicted RBP10.68□□□□□ -0.7
BDNF-218ENST00000533246 PSG11Q9UQ72 335 aa10.68□□□□□ -0.7
BDNF-218ENST00000533246 UBE2L5PA0A1B0GUS4 154 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 H7BYZ3 331 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 CST4P01036 141 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 SUMO1P63165 101 aaKnown RBP10.67□□□□□ -0.7
BDNF-218ENST00000533246 PRSS54Q6PEW0 395 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 HES7Q9BYE0 225 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 NAA60Q9H7X0 242 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 SLC7A10Q9NS82 523 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 C3orf85A0A1B0GTC6 90 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 M0R1X1 148 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 NHLH1Q02575 133 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 TPRX1Q8N7U7 411 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 MARS2Q96GW9 593 aaKnown RBP10.67□□□□□ -0.7
BDNF-218ENST00000533246 TBX15Q96SF7 602 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms