RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 TOX4O94842 621 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 IGHV1-69P01742 117 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 LIPFP07098 398 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 GNB3P16520 340 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 DUSP1P28562 367 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 PRSS3P35030 304 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 CD69Q07108 199 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 ZNF181Q2M3W8 571 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 DEFB121Q5J5C9 76 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 SIGIRRQ6IA17 410 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 OR52I2Q8NH67 350 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 LRRC29Q8WV35 223 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 FCAMRQ8WWV6 532 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 CFHR4Q92496 578 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 ERGIC1Q969X5 290 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 SEH1LQ96EE3 360 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 ARHGAP5-AS1Q96IT6 56 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 CYYR1Q96J86 154 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 NEDD4LQ96PU5 975 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 PECRQ9BY49 303 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 HES4Q9HCC6 221 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 GCM1Q9NP62 436 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 PALMDQ9NP74 551 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 IL36RNQ9UBH0 155 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 ELF5Q9UKW6 265 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 KCNK7Q9Y2U2 307 aa9.25□□□□□ -0.93
TRAPPC4-213ENST00000533149 MEIOCA2RUB1 952 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 FAM90A10PA6NDY2 464 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 FAM90A18PA6NE21 464 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 FAM90A16PA6NEW6 464 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 TMEM235A6NFC5 223 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 FAM90A20PA6NIJ5 464 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 FAM90A8PA6NJQ4 464 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 FAM90A7PA6NKC0 464 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 FAM90A22PA8MWA6 464 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 FAM90A12PA8MX19 464 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 FAM90A5PA8MXJ8 464 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 FAM90A23PA8MXZ1 464 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 RNASEK-C17orf49H0YIS7 233 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 GABARAPH6UMI1 98 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 OR7C1O76099 320 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 FSTL3O95633 263 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 GSTP1P09211 210 aaKnown RBP9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 CD3GP09693 182 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 FAM90A15PP0C7V4 464 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 FAM90A13PP0C7W8 464 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 FAM90A14PP0C7W9 464 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 FAM90A24PP0C7X0 464 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 IL7P13232 177 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 HIST1H1DP16402 221 aaKnown RBP9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 FUT3P21217 361 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 GLRA1P23415 457 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 MRPS10P82664 201 aaKnown RBP9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 HOXA4Q00056 320 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 GUCA2AQ02747 115 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 SCN1BQ07699 218 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 IL13RA2Q14627 380 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 NKAPLQ5M9Q1 402 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 ATAD3CQ5T2N8 411 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 STEAP3Q658P3 488 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 SLC35E4Q6ICL7 350 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 ACP7Q6ZNF0 438 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 LYSMD2Q8IV50 215 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 BOLLQ8N9W6 283 aaKnown RBP9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 OR11L1Q8NGX0 322 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 Q8TCH9 128 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 SMIM4Q8WVI0 70 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 TMEM246Q9BRR3 403 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 WDR13Q9H1Z4 485 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 PLEKHJ1Q9NW61 149 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 RASL12Q9NYN1 266 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 PLA2G2EQ9NZK7 142 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 RNF7Q9UBF6 113 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 VPREB3Q9UKI3 123 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 HSF4Q9ULV5 492 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 FAM96BQ9Y3D0 163 aa9.24□□□□□ -0.93
TRAPPC4-213ENST00000533149 A0A0U1RQK1 487 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 LINC00854A0A1B0GVQ3 168 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 A0A1W2PQ09 198 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 H3BUI4 141 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 K7EIL1 84 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 SULT1C2O00338 296 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 MFNGO00587 321 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 SH2D1BO14796 132 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 DEGS1O15121 323 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 ORC5O43913 435 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 PDCD6O75340 191 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 RBBP9O75884 186 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 LHBP01229 141 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 CHATP28329 748 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 IKZF1Q13422 519 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 ARL6IP1Q15041 203 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 PNLIPRP3Q17RR3 467 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 MPV17LQ2QL34 196 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 METTL11BQ5VVY1 283 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 HACD4Q5VWC8 232 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 CD276Q5ZPR3 534 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 TRIQKQ629K1 86 aa9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 WDR25Q64LD2 544 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC4-213ENST00000533149 Q6P435 159 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms