RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	JAM3	Q9BX67	310 aa		12.26	□□□□□ -0.45
TM9SF1-209	ENST00000530468	ERVK13-1	Q9NX77	482 aa		12.26	□□□□□ -0.45
TM9SF1-209	ENST00000530468	IL36G	Q9NZH8	169 aa		12.26	□□□□□ -0.45
TM9SF1-209	ENST00000530468		A0A1W2PPE3	182 aa		12.25	□□□□□ -0.45
TM9SF1-209	ENST00000530468	TMEM30CP	A0ZSE6	113 aa		12.25	□□□□□ -0.45
TM9SF1-209	ENST00000530468		E9PI62	339 aa		12.25	□□□□□ -0.45
TM9SF1-209	ENST00000530468	RRP9	O43818	475 aa	Known RBP	12.25	□□□□□ -0.45
TM9SF1-209	ENST00000530468	OR7C1	O76099	320 aa	Predicted RBP	12.25	□□□□□ -0.45
TM9SF1-209	ENST00000530468	CD2	P06729	351 aa		12.25	□□□□□ -0.45
TM9SF1-209	ENST00000530468	GABRB1	P18505	474 aa		12.25	□□□□□ -0.45
TM9SF1-209	ENST00000530468	IL3RA	P26951	378 aa		12.25	□□□□□ -0.45
TM9SF1-209	ENST00000530468	RAB40B	Q12829	278 aa		12.25	□□□□□ -0.45
TM9SF1-209	ENST00000530468	FOXE3	Q13461	319 aa		12.25	□□□□□ -0.45
TM9SF1-209	ENST00000530468	ZIK1	Q3SY52	487 aa	Predicted RBP	12.25	□□□□□ -0.45
TM9SF1-209	ENST00000530468		Q3ZCU0	254 aa		12.25	□□□□□ -0.45
TM9SF1-209	ENST00000530468		Q8N6K4	173 aa		12.25	□□□□□ -0.45
TM9SF1-209	ENST00000530468	OR5M8	Q8NGP6	311 aa		12.25	□□□□□ -0.45
TM9SF1-209	ENST00000530468	TFAP2C	Q92754	450 aa		12.25	□□□□□ -0.45
TM9SF1-209	ENST00000530468	METTL9	Q9H1A3	318 aa		12.25	□□□□□ -0.45
TM9SF1-209	ENST00000530468	DCLRE1B	Q9H816	532 aa		12.25	□□□□□ -0.45
TM9SF1-209	ENST00000530468	ST3GAL6	Q9Y274	331 aa		12.25	□□□□□ -0.45
TM9SF1-209	ENST00000530468	GMPPB	Q9Y5P6	360 aa		12.25	□□□□□ -0.45
TM9SF1-209	ENST00000530468	IGHV3-72	A0A0B4J1Y9	119 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	TRAV39	A0A0B4J263	110 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	SDCBP	O00560	298 aa	Predicted RBP	12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	CSTB	P04080	98 aa	Known RBP	12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	RPLP1	P05386	114 aa	Known RBP	12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	ELANE	P08246	267 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	CD1B	P29016	333 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	CDX1	P47902	265 aa	Predicted RBP	12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	REG1B	P48304	166 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	RBM11	P57052	281 aa	Known RBP	12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	RAB25	P57735	213 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	COL7A1	Q02388	2944 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	GPR50	Q13585	617 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	KIR2DS1	Q14954	304 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	KLHL22	Q53GT1	634 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	C9orf66	Q5T8R8	295 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	C10orf67	Q8IYJ2	551 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	RNF152	Q8N8N0	203 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468		Q8N9W7	124 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	OR8H1	Q8NGG4	311 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	OR52N1	Q8NH53	320 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	GPR148	Q8TDV2	347 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	PYDC1	Q8WXC3	89 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	ARL11	Q969Q4	196 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	DUX3	Q96PT4	197 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	TAS2R4	Q9NYW5	299 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	AASS	Q9UDR5	926 aa		12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	SIRT4	Q9Y6E7	314 aa	Predicted RBP	12.24	□□□□□ -0.45
TM9SF1-209	ENST00000530468	NBEAL2	Q6ZNJ1	2754 aa		12.23	□□□□□ -0.45
TM9SF1-209	ENST00000530468	LINC01548	A6NM66	108 aa		12.23	□□□□□ -0.45
TM9SF1-209	ENST00000530468	C15orf65	H3BRN8	121 aa		12.23	□□□□□ -0.45
TM9SF1-209	ENST00000530468	TXNL1	O43396	289 aa		12.23	□□□□□ -0.45
TM9SF1-209	ENST00000530468	ORC5	O43913	435 aa		12.23	□□□□□ -0.45
TM9SF1-209	ENST00000530468	CDRT1	O95170	752 aa		12.23	□□□□□ -0.45
TM9SF1-209	ENST00000530468	MOS	P00540	346 aa		12.23	□□□□□ -0.45
TM9SF1-209	ENST00000530468	SOX2	P48431	317 aa		12.23	□□□□□ -0.45
TM9SF1-209	ENST00000530468	PPP3R1	P63098	170 aa		12.23	□□□□□ -0.45
TM9SF1-209	ENST00000530468	MPV17L	Q2QL34	196 aa		12.23	□□□□□ -0.45
TM9SF1-209	ENST00000530468	RHOXF1	Q8NHV9	184 aa		12.23	□□□□□ -0.45
TM9SF1-209	ENST00000530468	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	12.23	□□□□□ -0.45
TM9SF1-209	ENST00000530468	S100A13	Q99584	98 aa		12.23	□□□□□ -0.45
TM9SF1-209	ENST00000530468	RASL11B	Q9BPW5	248 aa		12.23	□□□□□ -0.45
TM9SF1-209	ENST00000530468	TMEM138	Q9NPI0	162 aa		12.23	□□□□□ -0.45
TM9SF1-209	ENST00000530468	MRPS18A	Q9NVS2	196 aa	Known RBP	12.23	□□□□□ -0.45
TM9SF1-209	ENST00000530468	GFOD1	Q9NXC2	390 aa		12.23	□□□□□ -0.45
TM9SF1-209	ENST00000530468		U3KQK5	164 aa		12.23	□□□□□ -0.45
TM9SF1-209	ENST00000530468	GEMIN2	O14893	280 aa	Known RBP	12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	ZNF780A	O75290	641 aa	Predicted RBP	12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	ZNF93	P35789	620 aa	Predicted RBP	12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	LUM	P51884	338 aa	Predicted RBP	12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	CCDC58	Q4VC31	144 aa		12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	DDI2	Q5TDH0	399 aa		12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	RPL22L1	Q6P5R6	122 aa	Known RBP	12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	LCNL1	Q6ZST4	164 aa		12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	TMEM104	Q8NE00	496 aa		12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	OR52I1	Q8NGK6	324 aa		12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	NEK7	Q8TDX7	302 aa		12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	RGP1	Q92546	391 aa	Predicted RBP	12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	ST6GALNAC6	Q969X2	333 aa		12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	TMEM106A	Q96A25	262 aa		12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	S1PR3	Q99500	378 aa		12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	AMBN	Q9NP70	447 aa		12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	RAB9B	Q9NP90	201 aa		12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	PLSCR3	Q9NRY6	295 aa		12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	ZNF581	Q9P0T4	197 aa		12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	ING4	Q9UNL4	249 aa		12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	RPL36	Q9Y3U8	105 aa	Known RBP	12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	LSM4	Q9Y4Z0	139 aa	Known RBP	12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	RYR3	Q15413	4870 aa		12.22	□□□□□ -0.45
TM9SF1-209	ENST00000530468	EBAG9	O00559	213 aa		12.21	□□□□□ -0.45
TM9SF1-209	ENST00000530468	IGHG4	P01861	327 aa		12.21	□□□□□ -0.45
TM9SF1-209	ENST00000530468	SERPINA2	P20848	420 aa		12.21	□□□□□ -0.45
TM9SF1-209	ENST00000530468	VDAC1	P21796	283 aa		12.21	□□□□□ -0.45
TM9SF1-209	ENST00000530468	GTF2A1	P52655	376 aa	Predicted RBP	12.21	□□□□□ -0.45
TM9SF1-209	ENST00000530468	DEFB136	Q30KP8	78 aa		12.21	□□□□□ -0.45
TM9SF1-209	ENST00000530468	TMEM30B	Q3MIR4	351 aa		12.21	□□□□□ -0.45
TM9SF1-209	ENST00000530468	ATAD3C	Q5T2N8	411 aa		12.21	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms