RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 OR4C45A6NMZ5 311 aa12.55□□□□□ -0.4
COL16A1-216ENST00000529928 VDAC1P21796 283 aa12.55□□□□□ -0.4
COL16A1-216ENST00000529928 MTNR1BP49286 362 aa12.55□□□□□ -0.4
COL16A1-216ENST00000529928 PAX5Q02548 391 aa12.55□□□□□ -0.4
COL16A1-216ENST00000529928 CFHR3Q02985 330 aa12.55□□□□□ -0.4
COL16A1-216ENST00000529928 RAB40BQ12829 278 aa12.55□□□□□ -0.4
COL16A1-216ENST00000529928 GALEQ14376 348 aa12.55□□□□□ -0.4
COL16A1-216ENST00000529928 SMN1Q16637 294 aaKnown RBP12.55□□□□□ -0.4
COL16A1-216ENST00000529928 PAN3Q58A45 887 aaKnown RBP12.55□□□□□ -0.4
COL16A1-216ENST00000529928 FAM27D1Q5T7N8 215 aa12.55□□□□□ -0.4
COL16A1-216ENST00000529928 LHFPL3Q86UP9 236 aa12.55□□□□□ -0.4
COL16A1-216ENST00000529928 Q8N6K4 173 aa12.55□□□□□ -0.4
COL16A1-216ENST00000529928 OR11H1Q8NG94 326 aa12.55□□□□□ -0.4
COL16A1-216ENST00000529928 OR10AC1Q8NH08 325 aa12.55□□□□□ -0.4
COL16A1-216ENST00000529928 RFESDQ8TAC1 157 aa12.55□□□□□ -0.4
COL16A1-216ENST00000529928 C4orf36Q96KX1 117 aa12.55□□□□□ -0.4
COL16A1-216ENST00000529928 Q96MT0 163 aa12.55□□□□□ -0.4
COL16A1-216ENST00000529928 ISG20L2Q9H9L3 353 aaKnown RBP12.55□□□□□ -0.4
COL16A1-216ENST00000529928 ERVK13-1Q9NX77 482 aa12.55□□□□□ -0.4
COL16A1-216ENST00000529928 IGHV3-72A0A0B4J1Y9 119 aa12.54□□□□□ -0.4
COL16A1-216ENST00000529928 OR8U8P0C7N1 319 aa12.54□□□□□ -0.4
COL16A1-216ENST00000529928 TMEM225BP0DP42 221 aa12.54□□□□□ -0.4
COL16A1-216ENST00000529928 PSMB8P28062 276 aa12.54□□□□□ -0.4
COL16A1-216ENST00000529928 SSTR5P35346 364 aa12.54□□□□□ -0.4
COL16A1-216ENST00000529928 ZNF691Q5VV52 312 aa12.54□□□□□ -0.4
COL16A1-216ENST00000529928 LPCAT4Q643R3 524 aa12.54□□□□□ -0.4
COL16A1-216ENST00000529928 SYS1Q8N2H4 156 aa12.54□□□□□ -0.4
COL16A1-216ENST00000529928 OR51A4Q8NGJ6 313 aa12.54□□□□□ -0.4
COL16A1-216ENST00000529928 OR52I1Q8NGK6 324 aa12.54□□□□□ -0.4
COL16A1-216ENST00000529928 OR13C3Q8NGS6 347 aa12.54□□□□□ -0.4
COL16A1-216ENST00000529928 MRGPRDQ8TDS7 321 aa12.54□□□□□ -0.4
COL16A1-216ENST00000529928 RASL11BQ9BPW5 248 aa12.54□□□□□ -0.4
COL16A1-216ENST00000529928 ALG8Q9BVK2 526 aa12.54□□□□□ -0.4
COL16A1-216ENST00000529928 JAM3Q9BX67 310 aa12.54□□□□□ -0.4
COL16A1-216ENST00000529928 ZMAT4Q9H898 229 aa12.54□□□□□ -0.4
COL16A1-216ENST00000529928 GAR1Q9NY12 217 aaKnown RBP12.54□□□□□ -0.4
COL16A1-216ENST00000529928 TRAV24A0A0B4J272 114 aa12.53□□□□□ -0.4
COL16A1-216ENST00000529928 A0A1W2PPE3 182 aa12.53□□□□□ -0.4
COL16A1-216ENST00000529928 E9PI62 339 aa12.53□□□□□ -0.4
COL16A1-216ENST00000529928 J3QLW9 94 aa12.53□□□□□ -0.4
COL16A1-216ENST00000529928 FADS2O95864 444 aaKnown RBP12.53□□□□□ -0.4
COL16A1-216ENST00000529928 LIMS3P0CW19 117 aa12.53□□□□□ -0.4
COL16A1-216ENST00000529928 LIMS4P0CW20 117 aa12.53□□□□□ -0.4
COL16A1-216ENST00000529928 OR5H8P0DN80 308 aa12.53□□□□□ -0.4
COL16A1-216ENST00000529928 ZNF19P17023 458 aa12.53□□□□□ -0.4
COL16A1-216ENST00000529928 REG1BP48304 166 aa12.53□□□□□ -0.4
COL16A1-216ENST00000529928 KCNJ3P48549 501 aa12.53□□□□□ -0.4
COL16A1-216ENST00000529928 ADARB1P78563 741 aaKnown RBP12.53□□□□□ -0.4
COL16A1-216ENST00000529928 RCN1Q15293 331 aa12.53□□□□□ -0.4
COL16A1-216ENST00000529928 LRRC36Q1X8D7 754 aa12.53□□□□□ -0.4
COL16A1-216ENST00000529928 RSBN1Q5VWQ0 802 aaPredicted RBP12.53□□□□□ -0.4
COL16A1-216ENST00000529928 ELP2Q6IA86 826 aa12.53□□□□□ -0.4
COL16A1-216ENST00000529928 ZNF429Q86V71 674 aa12.53□□□□□ -0.4
COL16A1-216ENST00000529928 OR8H1Q8NGG4 311 aa12.53□□□□□ -0.4
COL16A1-216ENST00000529928 CNIH3Q8TBE1 160 aa12.53□□□□□ -0.4
COL16A1-216ENST00000529928 CITED4Q96RK1 184 aa12.53□□□□□ -0.4
COL16A1-216ENST00000529928 S1PR3Q99500 378 aa12.53□□□□□ -0.4
COL16A1-216ENST00000529928 PLSCR3Q9NRY6 295 aa12.53□□□□□ -0.4
COL16A1-216ENST00000529928 ZNF580Q9UK33 172 aa12.53□□□□□ -0.4
COL16A1-216ENST00000529928 RPL36Q9Y3U8 105 aaKnown RBP12.53□□□□□ -0.4
COL16A1-216ENST00000529928 ANKRD65E5RJM6 399 aa12.52□□□□□ -0.41
COL16A1-216ENST00000529928 MOSP00540 346 aa12.52□□□□□ -0.41
COL16A1-216ENST00000529928 IGF1P05019 195 aa12.52□□□□□ -0.41
COL16A1-216ENST00000529928 HCKP08631 526 aa12.52□□□□□ -0.41
COL16A1-216ENST00000529928 HTR1AP08908 422 aa12.52□□□□□ -0.41
COL16A1-216ENST00000529928 FRMD6-AS1P0C7T7 363 aa12.52□□□□□ -0.41
COL16A1-216ENST00000529928 CD1BP29016 333 aa12.52□□□□□ -0.41
COL16A1-216ENST00000529928 SOX6P35712 828 aa12.52□□□□□ -0.41
COL16A1-216ENST00000529928 ZP1P60852 638 aa12.52□□□□□ -0.41
COL16A1-216ENST00000529928 ALKBH1Q13686 389 aaKnown RBP12.52□□□□□ -0.41
COL16A1-216ENST00000529928 KISS1Q15726 138 aa12.52□□□□□ -0.41
COL16A1-216ENST00000529928 PACRGLQ8N7B6 248 aa12.52□□□□□ -0.41
COL16A1-216ENST00000529928 TMEM104Q8NE00 496 aa12.52□□□□□ -0.41
COL16A1-216ENST00000529928 PLPPR1Q8TBJ4 325 aa12.52□□□□□ -0.41
COL16A1-216ENST00000529928 MYOZ3Q8TDC0 251 aa12.52□□□□□ -0.41
COL16A1-216ENST00000529928 UBE2E2Q96LR5 201 aa12.52□□□□□ -0.41
COL16A1-216ENST00000529928 NR1H4Q96RI1 486 aaPredicted RBP12.52□□□□□ -0.41
COL16A1-216ENST00000529928 ZCCHC4Q9H5U6 513 aa12.52□□□□□ -0.41
COL16A1-216ENST00000529928 FGF20Q9NP95 211 aaPredicted RBP12.52□□□□□ -0.41
COL16A1-216ENST00000529928 CHCHD3Q9NX63 227 aaKnown RBP12.52□□□□□ -0.41
COL16A1-216ENST00000529928 CASQ2O14958 399 aaPredicted RBP12.51□□□□□ -0.41
COL16A1-216ENST00000529928 ZNF616Q08AN1 781 aa12.51□□□□□ -0.41
COL16A1-216ENST00000529928 IL13RA2Q14627 380 aa12.51□□□□□ -0.41
COL16A1-216ENST00000529928 OGFRL1Q5TC84 451 aaPredicted RBP12.51□□□□□ -0.41
COL16A1-216ENST00000529928 OVCH2Q7RTZ1 564 aa12.51□□□□□ -0.41
COL16A1-216ENST00000529928 FAM71E2Q8N5Q1 922 aa12.51□□□□□ -0.41
COL16A1-216ENST00000529928 LINC00311Q8N616 119 aa12.51□□□□□ -0.41
COL16A1-216ENST00000529928 ZNF555Q8NEP9 628 aa12.51□□□□□ -0.41
COL16A1-216ENST00000529928 OR52M1Q8NGK5 317 aa12.51□□□□□ -0.41
COL16A1-216ENST00000529928 OR1N2Q8NGR9 330 aa12.51□□□□□ -0.41
COL16A1-216ENST00000529928 RTN4IP1Q8WWV3 396 aaPredicted RBP12.51□□□□□ -0.41
COL16A1-216ENST00000529928 CPNE2Q96FN4 548 aaPredicted RBP12.51□□□□□ -0.41
COL16A1-216ENST00000529928 KCTD7Q96MP8 289 aa12.51□□□□□ -0.41
COL16A1-216ENST00000529928 HSPB9Q9BQS6 159 aa12.51□□□□□ -0.41
COL16A1-216ENST00000529928 CHCHD6Q9BRQ6 235 aa12.51□□□□□ -0.41
COL16A1-216ENST00000529928 ISYNA1Q9NPH2 558 aa12.51□□□□□ -0.41
COL16A1-216ENST00000529928 C8orf4Q9NR00 106 aa12.51□□□□□ -0.41
COL16A1-216ENST00000529928 I3L521 148 aa12.5□□□□□ -0.41
COL16A1-216ENST00000529928 GZMHP20718 246 aa12.5□□□□□ -0.41
COL16A1-216ENST00000529928 IL3RAP26951 378 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms