RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 LINC00596Q86U02 117 aa12.36□□□□□ -0.43
CTSB-215ENST00000528965 ZNF695Q8IW36 515 aa12.36□□□□□ -0.43
CTSB-215ENST00000528965 IZUMO1Q8IYV9 350 aa12.36□□□□□ -0.43
CTSB-215ENST00000528965 RFESDQ8TAC1 157 aa12.36□□□□□ -0.43
CTSB-215ENST00000528965 PLPPR1Q8TBJ4 325 aa12.36□□□□□ -0.43
CTSB-215ENST00000528965 TMEM80Q96HE8 168 aa12.36□□□□□ -0.43
CTSB-215ENST00000528965 B9D2Q9BPU9 175 aa12.36□□□□□ -0.43
CTSB-215ENST00000528965 JAM3Q9BX67 310 aa12.36□□□□□ -0.43
CTSB-215ENST00000528965 METTL9Q9H1A3 318 aa12.36□□□□□ -0.43
CTSB-215ENST00000528965 IFT22Q9H7X7 185 aa12.36□□□□□ -0.43
CTSB-215ENST00000528965 DCLRE1BQ9H816 532 aa12.36□□□□□ -0.43
CTSB-215ENST00000528965 MRPS18AQ9NVS2 196 aaKnown RBP12.36□□□□□ -0.43
CTSB-215ENST00000528965 PAK1IP1Q9NWT1 392 aaPredicted RBP12.36□□□□□ -0.43
CTSB-215ENST00000528965 EXOSC1Q9Y3B2 195 aaKnown RBP12.36□□□□□ -0.43
CTSB-215ENST00000528965 AP4M1O00189 453 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 CCRL2O00421 344 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 OR7C1O76099 320 aaPredicted RBP12.35□□□□□ -0.43
CTSB-215ENST00000528965 HTR3BO95264 441 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 GZMHP20718 246 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 CAPGP40121 348 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 NHLRC3Q5JS37 347 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 ZNF529Q6P280 563 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 TEX38Q6PEX7 206 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 MOB3BQ86TA1 216 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 TGIF2LXQ8IUE1 241 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 STPG2Q8N412 459 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 STX19Q8N4C7 294 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 SUMF2Q8NBJ7 301 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 Q8NFD4 153 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 OR10K1Q8NGX5 313 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 GPR148Q8TDV2 347 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 APH1BQ8WW43 257 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 RAB9BQ9NP90 201 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 FGF20Q9NP95 211 aaPredicted RBP12.35□□□□□ -0.43
CTSB-215ENST00000528965 LIN7CQ9NUP9 197 aaKnown RBP12.35□□□□□ -0.43
CTSB-215ENST00000528965 TAS2R4Q9NYW5 299 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 IL36GQ9NZH8 169 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 ST3GAL6Q9Y274 331 aa12.35□□□□□ -0.43
CTSB-215ENST00000528965 IGHV1-3A0A0C4DH29 117 aa12.34□□□□□ -0.43
CTSB-215ENST00000528965 NCBP2LA6PVI3 153 aaKnown RBP12.34□□□□□ -0.43
CTSB-215ENST00000528965 RRP9O43818 475 aaKnown RBP12.34□□□□□ -0.43
CTSB-215ENST00000528965 WBP4O75554 376 aaKnown RBP12.34□□□□□ -0.43
CTSB-215ENST00000528965 SOX2P48431 317 aa12.34□□□□□ -0.43
CTSB-215ENST00000528965 RBM11P57052 281 aaKnown RBP12.34□□□□□ -0.43
CTSB-215ENST00000528965 DGCR2P98153 550 aa12.34□□□□□ -0.43
CTSB-215ENST00000528965 DIAPH2-AS1Q14236 149 aa12.34□□□□□ -0.43
CTSB-215ENST00000528965 CCDC58Q4VC31 144 aa12.34□□□□□ -0.43
CTSB-215ENST00000528965 RPL22L1Q6P5R6 122 aaKnown RBP12.34□□□□□ -0.43
CTSB-215ENST00000528965 ASCL4Q6XD76 172 aa12.34□□□□□ -0.43
CTSB-215ENST00000528965 OR51A2Q8NGJ7 313 aa12.34□□□□□ -0.43
CTSB-215ENST00000528965 OR52M1Q8NGK5 317 aa12.34□□□□□ -0.43
CTSB-215ENST00000528965 OR2T10Q8NGZ9 312 aa12.34□□□□□ -0.43
CTSB-215ENST00000528965 NEK7Q8TDX7 302 aa12.34□□□□□ -0.43
CTSB-215ENST00000528965 P2RX4Q99571 388 aa12.34□□□□□ -0.43
CTSB-215ENST00000528965 TMEM138Q9NPI0 162 aa12.34□□□□□ -0.43
CTSB-215ENST00000528965 EFCAB10A6NFE3 127 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 ERICH4A6NGS2 130 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 E9PI62 339 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 H0YHG0 523 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 SDCBPO00560 298 aaPredicted RBP12.33□□□□□ -0.44
CTSB-215ENST00000528965 TXNL1O43396 289 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 ZNF780AO75290 641 aaPredicted RBP12.33□□□□□ -0.44
CTSB-215ENST00000528965 LIMS3P0CW19 117 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 LIMS4P0CW20 117 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 GPR12P47775 334 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 ETV1P50549 477 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 EBI3Q14213 229 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 PNLIPRP3Q17RR3 467 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 MPV17LQ2QL34 196 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 Q3ZCU0 254 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 CXorf66Q5JRM2 361 aaPredicted RBP12.33□□□□□ -0.44
CTSB-215ENST00000528965 OGFRL1Q5TC84 451 aaPredicted RBP12.33□□□□□ -0.44
CTSB-215ENST00000528965 DDI2Q5TDH0 399 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 LINC00311Q8N616 119 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 C8orf31Q8N9H6 132 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 OR8U1Q8NH10 309 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 OR52N1Q8NH53 320 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 ARL11Q969Q4 196 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 TMEM106AQ96A25 262 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 WWC2-AS2Q96NR7 200 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 BABAM2Q9NXR7 383 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 LINC00527Q9UJ94 153 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 ING4Q9UNL4 249 aa12.33□□□□□ -0.44
CTSB-215ENST00000528965 DIMT1Q9UNQ2 313 aaKnown RBP12.33□□□□□ -0.44
CTSB-215ENST00000528965 A0A1W2PPE3 182 aa12.32□□□□□ -0.44
CTSB-215ENST00000528965 ORC5O43913 435 aa12.32□□□□□ -0.44
CTSB-215ENST00000528965 RAMP3O60896 148 aa12.32□□□□□ -0.44
CTSB-215ENST00000528965 CDRT1O95170 752 aa12.32□□□□□ -0.44
CTSB-215ENST00000528965 ZNF93P35789 620 aaPredicted RBP12.32□□□□□ -0.44
CTSB-215ENST00000528965 REG1BP48304 166 aa12.32□□□□□ -0.44
CTSB-215ENST00000528965 GTF2A1P52655 376 aaPredicted RBP12.32□□□□□ -0.44
CTSB-215ENST00000528965 RAB25P57735 213 aa12.32□□□□□ -0.44
CTSB-215ENST00000528965 ADARB1P78563 741 aaKnown RBP12.32□□□□□ -0.44
CTSB-215ENST00000528965 GABPB1Q06547 395 aaPredicted RBP12.32□□□□□ -0.44
CTSB-215ENST00000528965 ST3GAL4Q11206 333 aa12.32□□□□□ -0.44
CTSB-215ENST00000528965 TMEM30BQ3MIR4 351 aa12.32□□□□□ -0.44
CTSB-215ENST00000528965 ATAD3CQ5T2N8 411 aa12.32□□□□□ -0.44
CTSB-215ENST00000528965 OR2G6Q5TZ20 316 aa12.32□□□□□ -0.44
CTSB-215ENST00000528965 C18orf65Q6ZTR6 163 aa12.32□□□□□ -0.44
CTSB-215ENST00000528965 BPIFB6Q8NFQ5 453 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms