RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 RPS11P62280 158 aaKnown RBP eCLIP6.85□□□□□ -1.31
SSBP3-212ENST00000528930 CD300CQ08708 224 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 ACSM1Q08AH1 577 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 YIF1BQ5BJH7 314 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 SPIN3Q5JUX0 258 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 NCR3LG1Q68D85 454 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 Q6P435 159 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 FIP1L1Q6UN15 594 aaKnown RBP6.85□□□□□ -1.31
SSBP3-212ENST00000528930 ZNF767PQ75MW2 155 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 TCF23Q7RTU1 214 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 SLC51BQ86UW2 128 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 ZSCAN4Q8NAM6 433 aaPredicted RBP6.85□□□□□ -1.31
SSBP3-212ENST00000528930 OR4S1Q8NGB4 309 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 OR13C5Q8NGS8 318 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 GPR148Q8TDV2 347 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 SSMEM1Q8WWF3 244 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 CAPSLQ8WWF8 208 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 GHSRQ92847 366 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 TMEM106AQ96A25 262 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 ORAI1Q96D31 301 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 SMIM19Q96E16 107 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 PGLYRP3Q96LB9 341 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 TNFRSF19Q9NS68 423 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 TAS2R4Q9NYW5 299 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 ZNRD1Q9P1U0 126 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 SF3B6Q9Y3B4 125 aaKnown RBP6.85□□□□□ -1.31
SSBP3-212ENST00000528930 POMT1Q9Y6A1 747 aa6.85□□□□□ -1.31
SSBP3-212ENST00000528930 A0A1W2PPH5 198 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 MEX3AA1L020 520 aaKnown RBP6.84□□□□□ -1.31
SSBP3-212ENST00000528930 MEIOCA2RUB1 952 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 NPIPB6E9PJ23 425 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 GABRPO00591 440 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 GPX5O75715 221 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 CRYZL1O95825 349 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 OR2H2O95918 312 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 ALDOBP05062 364 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 GSTP1P09211 210 aaKnown RBP6.84□□□□□ -1.31
SSBP3-212ENST00000528930 FBP1P09467 338 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 NHLRC4P0CG21 123 aaPredicted RBP6.84□□□□□ -1.31
SSBP3-212ENST00000528930 ZNF728P0DKX0 622 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 IGFBP3P17936 291 aaPredicted RBP6.84□□□□□ -1.31
SSBP3-212ENST00000528930 RAB3AP20336 220 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 ERP29P30040 261 aaKnown RBP6.84□□□□□ -1.31
SSBP3-212ENST00000528930 SAA4P35542 130 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 OR3A1P47881 315 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 SNU13P55769 128 aaKnown RBP6.84□□□□□ -1.31
SSBP3-212ENST00000528930 EDDM3BP56851 147 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 GRK1Q15835 563 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 C6orf183Q5T699 404 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 ELP2Q6IA86 826 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 ASCL4Q6XD76 172 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 GDPGP1Q6ZNW5 385 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 AHSA2Q719I0 299 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 GDPD3Q7L5L3 318 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 NANOGP1Q8N7R0 232 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 TPRX1Q8N7U7 411 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 ZFP41Q8N8Y5 198 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 POC5Q8NA72 575 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 Q8NFD4 153 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 PXT1Q8NFP0 134 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 MCFD2Q8NI22 146 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 LINC01006Q8NI28 216 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 KIRREL1Q96J84 757 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 NKX3-1Q99801 234 aaPredicted RBP6.84□□□□□ -1.31
SSBP3-212ENST00000528930 CHST6Q9GZX3 395 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 MEGF9Q9H1U4 602 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 HEXA-AS1Q9H8Q6 139 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 RHOFQ9HBH0 211 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 EXOSC4Q9NPD3 245 aaKnown RBP6.84□□□□□ -1.31
SSBP3-212ENST00000528930 GSTK1Q9Y2Q3 226 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 FAM96BQ9Y3D0 163 aa6.84□□□□□ -1.31
SSBP3-212ENST00000528930 HECTD4Q9Y4D8 3996 aa6.84□□□□□ -1.32
SSBP3-212ENST00000528930 FAM90A8PA6NJQ4 464 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 SIRPB1O00241 398 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 SH2D1BO14796 132 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 MGST3O14880 152 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 RGS10O43665 173 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 GPR137BO60478 399 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 SNAPC5O75971 98 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 RBP4P02753 201 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 CDK1P06493 297 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 CD2P06729 351 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 IGHV1-8P0DP01 117 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 TMEM225BP0DP42 221 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 GABRR1P24046 479 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 HLA-DMAP28067 261 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 S100A5P33763 92 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 WNT4P56705 351 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 MEF2CQ06413 473 aaPredicted RBP6.83□□□□□ -1.32
SSBP3-212ENST00000528930 EDDM3AQ14507 147 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 Q499Y3 187 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 LDLRAD2Q5SZI1 272 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 RSBN1Q5VWQ0 802 aaPredicted RBP6.83□□□□□ -1.32
SSBP3-212ENST00000528930 RNLSQ5VYX0 342 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 STEAP3Q658P3 488 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 ZNF782Q6ZMW2 699 aaPredicted RBP6.83□□□□□ -1.32
SSBP3-212ENST00000528930 TCTE3Q8IZS6 198 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 STX19Q8N4C7 294 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 BEND2Q8NDZ0 799 aa6.83□□□□□ -1.32
SSBP3-212ENST00000528930 OR51T1Q8NGJ9 327 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms