RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 RFESDQ8TAC1 157 aa26.49■■□□□ 1.83
SSSCA1-205ENST00000527920 PSG11Q9UQ72 335 aa26.49■■□□□ 1.83
SSSCA1-205ENST00000527920 GLAP06280 429 aa26.48■■□□□ 1.83
SSSCA1-205ENST00000527920 MGMTP16455 207 aa26.48■■□□□ 1.83
SSSCA1-205ENST00000527920 MNDAP41218 407 aa26.48■■□□□ 1.83
SSSCA1-205ENST00000527920 GP2P55259 537 aaKnown RBP26.48■■□□□ 1.83
SSSCA1-205ENST00000527920 OR52M1Q8NGK5 317 aa26.48■■□□□ 1.83
SSSCA1-205ENST00000527920 NEK7Q8TDX7 302 aa26.48■■□□□ 1.83
SSSCA1-205ENST00000527920 TMED9Q9BVK6 235 aa26.48■■□□□ 1.83
SSSCA1-205ENST00000527920 ERICH4A6NGS2 130 aa26.47■■□□□ 1.83
SSSCA1-205ENST00000527920 MCRIP1C9JLW8 97 aa26.47■■□□□ 1.83
SSSCA1-205ENST00000527920 C15orf65H3BRN8 121 aa26.47■■□□□ 1.83
SSSCA1-205ENST00000527920 RGS10O43665 173 aa26.47■■□□□ 1.83
SSSCA1-205ENST00000527920 ORC5O43913 435 aa26.47■■□□□ 1.83
SSSCA1-205ENST00000527920 MT-ND4P03905 459 aa26.47■■□□□ 1.83
SSSCA1-205ENST00000527920 INSL4Q14641 139 aa26.47■■□□□ 1.83
SSSCA1-205ENST00000527920 GAPTQ8N292 157 aa26.47■■□□□ 1.83
SSSCA1-205ENST00000527920 TMEM104Q8NE00 496 aa26.47■■□□□ 1.83
SSSCA1-205ENST00000527920 UFD1Q92890 307 aa26.47■■□□□ 1.83
SSSCA1-205ENST00000527920 RPEQ96AT9 228 aa26.47■■□□□ 1.83
SSSCA1-205ENST00000527920 Q96M66 194 aa26.47■■□□□ 1.83
SSSCA1-205ENST00000527920 ISYNA1Q9NPH2 558 aa26.47■■□□□ 1.83
SSSCA1-205ENST00000527920 TRAV39A0A0B4J263 110 aa26.46■■□□□ 1.83
SSSCA1-205ENST00000527920 CA11O75493 328 aa26.46■■□□□ 1.83
SSSCA1-205ENST00000527920 UBBP0CG47 229 aa26.46■■□□□ 1.83
SSSCA1-205ENST00000527920 CRHBPP24387 322 aa26.46■■□□□ 1.83
SSSCA1-205ENST00000527920 MADCAM1Q13477 382 aa26.46■■□□□ 1.83
SSSCA1-205ENST00000527920 HABP2Q14520 560 aaPredicted RBP26.46■■□□□ 1.83
SSSCA1-205ENST00000527920 IZUMO2Q6UXV1 221 aa26.46■■□□□ 1.83
SSSCA1-205ENST00000527920 SELENOIQ9C0D9 397 aa26.46■■□□□ 1.83
SSSCA1-205ENST00000527920 CRTAPO75718 401 aaPredicted RBP26.45■■□□□ 1.82
SSSCA1-205ENST00000527920 OR2F2O95006 317 aa26.45■■□□□ 1.82
SSSCA1-205ENST00000527920 VSIG10L2P0DP72 767 aa26.45■■□□□ 1.82
SSSCA1-205ENST00000527920 BLCAPP62952 87 aa26.45■■□□□ 1.82
SSSCA1-205ENST00000527920 TPBGQ13641 420 aa26.45■■□□□ 1.82
SSSCA1-205ENST00000527920 FAM27D1Q5T7N8 215 aa26.45■■□□□ 1.82
SSSCA1-205ENST00000527920 RAB12Q6IQ22 244 aa26.45■■□□□ 1.82
SSSCA1-205ENST00000527920 LRRTM1Q86UE6 522 aa26.45■■□□□ 1.82
SSSCA1-205ENST00000527920 WIPF2Q8TF74 440 aaPredicted RBP26.45■■□□□ 1.82
SSSCA1-205ENST00000527920 LEAP2Q969E1 77 aa26.45■■□□□ 1.82
SSSCA1-205ENST00000527920 TOMM40LQ969M1 308 aa26.45■■□□□ 1.82
SSSCA1-205ENST00000527920 WNT10AQ9GZT5 417 aa26.45■■□□□ 1.82
SSSCA1-205ENST00000527920 CST11Q9H112 138 aa26.45■■□□□ 1.82
SSSCA1-205ENST00000527920 BANF2Q9H503 90 aa26.45■■□□□ 1.82
SSSCA1-205ENST00000527920 AIPO00170 330 aa26.44■■□□□ 1.82
SSSCA1-205ENST00000527920 TSPAN15O95858 294 aa26.44■■□□□ 1.82
SSSCA1-205ENST00000527920 UCHL1P09936 223 aa26.44■■□□□ 1.82
SSSCA1-205ENST00000527920 CD37P11049 281 aa26.44■■□□□ 1.82
SSSCA1-205ENST00000527920 TMEM30BQ3MIR4 351 aa26.44■■□□□ 1.82
SSSCA1-205ENST00000527920 HSD17B12Q53GQ0 312 aa26.44■■□□□ 1.82
SSSCA1-205ENST00000527920 C1orf100Q5SVJ3 147 aa26.44■■□□□ 1.82
SSSCA1-205ENST00000527920 GLT8D1Q68CQ7 371 aa26.44■■□□□ 1.82
SSSCA1-205ENST00000527920 PRSS48Q7RTY5 328 aa26.44■■□□□ 1.82
SSSCA1-205ENST00000527920 C8orf31Q8N9H6 132 aa26.44■■□□□ 1.82
SSSCA1-205ENST00000527920 CAPSLQ8WWF8 208 aa26.44■■□□□ 1.82
SSSCA1-205ENST00000527920 ARL11Q969Q4 196 aa26.44■■□□□ 1.82
SSSCA1-205ENST00000527920 RBM14Q96PK6 669 aaKnown RBP26.44■■□□□ 1.82
SSSCA1-205ENST00000527920 RAB9BQ9NP90 201 aa26.44■■□□□ 1.82
SSSCA1-205ENST00000527920 FAM90A9PA6NNJ1 464 aa26.43■■□□□ 1.82
SSSCA1-205ENST00000527920 CSF1P09603 554 aa26.43■■□□□ 1.82
SSSCA1-205ENST00000527920 SRMP19623 302 aa26.43■■□□□ 1.82
SSSCA1-205ENST00000527920 FUT3P21217 361 aa26.43■■□□□ 1.82
SSSCA1-205ENST00000527920 CD24P25063 80 aa26.43■■□□□ 1.82
SSSCA1-205ENST00000527920 RAB7AP51149 207 aa26.43■■□□□ 1.82
SSSCA1-205ENST00000527920 LTC4SQ16873 150 aa26.43■■□□□ 1.82
SSSCA1-205ENST00000527920 Q3ZCU0 254 aa26.43■■□□□ 1.82
SSSCA1-205ENST00000527920 RBM48Q5RL73 367 aaKnown RBP26.43■■□□□ 1.82
SSSCA1-205ENST00000527920 LIPKQ5VXJ0 399 aa26.43■■□□□ 1.82
SSSCA1-205ENST00000527920 CEACAM19Q7Z692 300 aa26.43■■□□□ 1.82
SSSCA1-205ENST00000527920 THNSL2Q86YJ6 484 aa26.43■■□□□ 1.82
SSSCA1-205ENST00000527920 ETAA1Q9NY74 926 aa26.43■■□□□ 1.82
SSSCA1-205ENST00000527920 PEX16Q9Y5Y5 336 aa26.43■■□□□ 1.82
SSSCA1-205ENST00000527920 OR8H3Q8N146 312 aa26.42■■□□□ 1.82
SSSCA1-205ENST00000527920 SLC25A33Q9BSK2 321 aa26.42■■□□□ 1.82
SSSCA1-205ENST00000527920 TET2Q6N021 2002 aaPredicted RBP26.41■■□□□ 1.82
SSSCA1-205ENST00000527920 M0QZK8 103 aa26.41■■□□□ 1.82
SSSCA1-205ENST00000527920 IGHV3-7P01780 117 aa26.41■■□□□ 1.82
SSSCA1-205ENST00000527920 FAM106CPP0CH98 169 aa26.41■■□□□ 1.82
SSSCA1-205ENST00000527920 PSMA1P25786 263 aaKnown RBP26.41■■□□□ 1.82
SSSCA1-205ENST00000527920 MLLT11Q13015 90 aaPredicted RBP26.41■■□□□ 1.82
SSSCA1-205ENST00000527920 TRAM1Q15629 374 aa26.41■■□□□ 1.82
SSSCA1-205ENST00000527920 C6orf183Q5T699 404 aa26.41■■□□□ 1.82
SSSCA1-205ENST00000527920 SIGIRRQ6IA17 410 aa26.41■■□□□ 1.82
SSSCA1-205ENST00000527920 TRAT1Q6PIZ9 186 aa26.41■■□□□ 1.82
SSSCA1-205ENST00000527920 Q6ZS46 218 aa26.41■■□□□ 1.82
SSSCA1-205ENST00000527920 LINC00311Q8N616 119 aa26.41■■□□□ 1.82
SSSCA1-205ENST00000527920 OR10X1Q8NGY0 326 aa26.41■■□□□ 1.82
SSSCA1-205ENST00000527920 CCDC107Q8WV48 283 aa26.41■■□□□ 1.82
SSSCA1-205ENST00000527920 A0A1W2PPI3 338 aa26.4■■□□□ 1.82
SSSCA1-205ENST00000527920 PDCD6O75340 191 aa26.4■■□□□ 1.82
SSSCA1-205ENST00000527920 VDAC2P45880 294 aaPredicted RBP26.4■■□□□ 1.82
SSSCA1-205ENST00000527920 GNG10P50151 68 aa26.4■■□□□ 1.82
SSSCA1-205ENST00000527920 LOXL3P58215 753 aa26.4■■□□□ 1.82
SSSCA1-205ENST00000527920 OCSTAMPQ9BR26 566 aa26.4■■□□□ 1.82
SSSCA1-205ENST00000527920 GFOD1Q9NXC2 390 aa26.4■■□□□ 1.82
SSSCA1-205ENST00000527920 TRAPPC2LQ9UL33 140 aa26.4■■□□□ 1.82
SSSCA1-205ENST00000527920 SDCBPO00560 298 aaPredicted RBP26.39■■□□□ 1.82
SSSCA1-205ENST00000527920 FBXO24O75426 580 aa26.39■■□□□ 1.82
SSSCA1-205ENST00000527920 ARSJQ5FYB0 599 aaPredicted RBP26.39■■□□□ 1.82
SSSCA1-205ENST00000527920 SYT6Q5T7P8 510 aaPredicted RBP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms