RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 NPIPB11E5RHQ5 1161 aa14.11□□□□□ -0.15
NR1H3-228ENST00000525441 BUB1B-PAK6H3BSN5 160 aa14.11□□□□□ -0.15
NR1H3-228ENST00000525441 MLLT11Q13015 90 aaPredicted RBP14.11□□□□□ -0.15
NR1H3-228ENST00000525441 KCTD21Q4G0X4 260 aa14.11□□□□□ -0.15
NR1H3-228ENST00000525441 FAM27D1Q5T7N8 215 aa14.11□□□□□ -0.15
NR1H3-228ENST00000525441 CCDC144NLQ6NUI1 221 aa14.11□□□□□ -0.15
NR1H3-228ENST00000525441 SLC16A12Q6ZSM3 486 aa14.11□□□□□ -0.15
NR1H3-228ENST00000525441 TMEM219Q86XT9 240 aa14.11□□□□□ -0.15
NR1H3-228ENST00000525441 RFESDQ8TAC1 157 aa14.11□□□□□ -0.15
NR1H3-228ENST00000525441 MMP28Q9H239 520 aa14.11□□□□□ -0.15
NR1H3-228ENST00000525441 BANF2Q9H503 90 aa14.11□□□□□ -0.15
NR1H3-228ENST00000525441 RAB9BQ9NP90 201 aa14.11□□□□□ -0.15
NR1H3-228ENST00000525441 RCC2Q9P258 522 aaKnown RBP14.11□□□□□ -0.15
NR1H3-228ENST00000525441 M0QZ24 198 aa14.1□□□□□ -0.15
NR1H3-228ENST00000525441 AIPO00170 330 aa14.1□□□□□ -0.15
NR1H3-228ENST00000525441 MRPS14O60783 128 aaKnown RBP14.1□□□□□ -0.15
NR1H3-228ENST00000525441 SC5DO75845 299 aa14.1□□□□□ -0.15
NR1H3-228ENST00000525441 UCHL1P09936 223 aa14.1□□□□□ -0.15
NR1H3-228ENST00000525441 SRMP19623 302 aa14.1□□□□□ -0.15
NR1H3-228ENST00000525441 SSTR5P35346 364 aa14.1□□□□□ -0.15
NR1H3-228ENST00000525441 LTC4SQ16873 150 aa14.1□□□□□ -0.15
NR1H3-228ENST00000525441 TPTE2P1Q5T6R2 138 aa14.1□□□□□ -0.15
NR1H3-228ENST00000525441 RAB12Q6IQ22 244 aa14.1□□□□□ -0.15
NR1H3-228ENST00000525441 CCBE1Q6UXH8 406 aaPredicted RBP14.1□□□□□ -0.15
NR1H3-228ENST00000525441 ZNF497Q6ZNH5 498 aa14.1□□□□□ -0.15
NR1H3-228ENST00000525441 LRRTM1Q86UE6 522 aa14.1□□□□□ -0.15
NR1H3-228ENST00000525441 TMEM203Q969S6 136 aa14.1□□□□□ -0.15
NR1H3-228ENST00000525441 ETAA1Q9NY74 926 aa14.1□□□□□ -0.15
NR1H3-228ENST00000525441 TRAV39A0A0B4J263 110 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 J3QR06 171 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 CA11O75493 328 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 ARL6IP5O75915 188 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 TNFAIP8O95379 198 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 MT-ND4P03905 459 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 GLAP06280 429 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 CPEP16870 476 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 JUNBP17275 347 aaPredicted RBP14.09□□□□□ -0.15
NR1H3-228ENST00000525441 FUT3P21217 361 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 MNDAP41218 407 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 EFNB2P52799 333 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 GP2P55259 537 aaKnown RBP14.09□□□□□ -0.15
NR1H3-228ENST00000525441 KRTAP10-3P60369 221 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 C1orf100Q5SVJ3 147 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 TREML4Q6UXN2 200 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 C16orf82Q7Z2V1 217 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 TMEM104Q8NE00 496 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 CAPSLQ8WWF8 208 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 RPEQ96AT9 228 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 AKR1E2Q96JD6 320 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 Q96M66 194 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 MGLLQ99685 303 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 PRSS22Q9GZN4 317 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 SIGLEC9Q9Y336 463 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 PEX16Q9Y5Y5 336 aa14.09□□□□□ -0.15
NR1H3-228ENST00000525441 ORC5O43913 435 aa14.08□□□□□ -0.16
NR1H3-228ENST00000525441 MAP2K4P45985 399 aa14.08□□□□□ -0.16
NR1H3-228ENST00000525441 RPS25P62851 125 aaKnown RBP14.08□□□□□ -0.16
NR1H3-228ENST00000525441 TBCEQ15813 527 aaPredicted RBP14.08□□□□□ -0.16
NR1H3-228ENST00000525441 C6orf183Q5T699 404 aa14.08□□□□□ -0.16
NR1H3-228ENST00000525441 Q6ZTK2 550 aa14.08□□□□□ -0.16
NR1H3-228ENST00000525441 ZNF367Q7RTV3 350 aa14.08□□□□□ -0.16
NR1H3-228ENST00000525441 OR52M1Q8NGK5 317 aa14.08□□□□□ -0.16
NR1H3-228ENST00000525441 CCDC107Q8WV48 283 aa14.08□□□□□ -0.16
NR1H3-228ENST00000525441 TOMM40LQ969M1 308 aa14.08□□□□□ -0.16
NR1H3-228ENST00000525441 ARL11Q969Q4 196 aa14.08□□□□□ -0.16
NR1H3-228ENST00000525441 FAM46BQ96A09 425 aa14.08□□□□□ -0.16
NR1H3-228ENST00000525441 TRAPPC2LQ9UL33 140 aa14.08□□□□□ -0.16
NR1H3-228ENST00000525441 PSG11Q9UQ72 335 aa14.08□□□□□ -0.16
NR1H3-228ENST00000525441 LY6LH3BQJ8 138 aa14.07□□□□□ -0.16
NR1H3-228ENST00000525441 PDCD6O75340 191 aa14.07□□□□□ -0.16
NR1H3-228ENST00000525441 MPIG6BO95866 241 aa14.07□□□□□ -0.16
NR1H3-228ENST00000525441 HTR2CP28335 458 aa14.07□□□□□ -0.16
NR1H3-228ENST00000525441 MADCAM1Q13477 382 aa14.07□□□□□ -0.16
NR1H3-228ENST00000525441 HERPUD1Q15011 391 aa14.07□□□□□ -0.16
NR1H3-228ENST00000525441 ARSJQ5FYB0 599 aaPredicted RBP14.07□□□□□ -0.16
NR1H3-228ENST00000525441 TRAT1Q6PIZ9 186 aa14.07□□□□□ -0.16
NR1H3-228ENST00000525441 Q8N2B8 174 aa14.07□□□□□ -0.16
NR1H3-228ENST00000525441 OR6M1Q8NGM8 313 aa14.07□□□□□ -0.16
NR1H3-228ENST00000525441 OR10X1Q8NGY0 326 aa14.07□□□□□ -0.16
NR1H3-228ENST00000525441 KCNG3Q8TAE7 436 aa14.07□□□□□ -0.16
NR1H3-228ENST00000525441 LEAP2Q969E1 77 aa14.07□□□□□ -0.16
NR1H3-228ENST00000525441 ZNF702PQ9H963 129 aa14.07□□□□□ -0.16
NR1H3-228ENST00000525441 C15orf65H3BRN8 121 aa14.06□□□□□ -0.16
NR1H3-228ENST00000525441 SDCBPO00560 298 aaPredicted RBP14.06□□□□□ -0.16
NR1H3-228ENST00000525441 SPINT2O43291 252 aa14.06□□□□□ -0.16
NR1H3-228ENST00000525441 IGHV3-7P01780 117 aa14.06□□□□□ -0.16
NR1H3-228ENST00000525441 VSIG8P0DPA2 414 aa14.06□□□□□ -0.16
NR1H3-228ENST00000525441 RANBP1P43487 201 aa14.06□□□□□ -0.16
NR1H3-228ENST00000525441 GNG10P50151 68 aa14.06□□□□□ -0.16
NR1H3-228ENST00000525441 TMEM30BQ3MIR4 351 aa14.06□□□□□ -0.16
NR1H3-228ENST00000525441 UTF1Q5T230 341 aa14.06□□□□□ -0.16
NR1H3-228ENST00000525441 SYT6Q5T7P8 510 aaPredicted RBP14.06□□□□□ -0.16
NR1H3-228ENST00000525441 ZNF773Q6PK81 442 aa14.06□□□□□ -0.16
NR1H3-228ENST00000525441 TMEM91Q6ZNR0 172 aa14.06□□□□□ -0.16
NR1H3-228ENST00000525441 KLHDC1Q8N7A1 406 aa14.06□□□□□ -0.16
NR1H3-228ENST00000525441 NEDD4LQ96PU5 975 aa14.06□□□□□ -0.16
NR1H3-228ENST00000525441 TMEM59Q9BXS4 323 aa14.06□□□□□ -0.16
NR1H3-228ENST00000525441 LIN7BQ9HAP6 207 aa14.06□□□□□ -0.16
NR1H3-228ENST00000525441 ACOT13Q9NPJ3 140 aa14.06□□□□□ -0.16
NR1H3-228ENST00000525441 SLC22A1O15245 554 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms