RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 SCOCQ9UIL1 159 aa18.76■□□□□ 0.59
USP47-205ENST00000525257 EXOGQ9Y2C4 368 aaKnown RBP18.76■□□□□ 0.59
USP47-205ENST00000525257 C3orf84H3BNL1 204 aa18.75■□□□□ 0.59
USP47-205ENST00000525257 HTR3BO95264 441 aa18.75■□□□□ 0.59
USP47-205ENST00000525257 RAB3AP20336 220 aa18.75■□□□□ 0.59
USP47-205ENST00000525257 SNRPGP62308 76 aaKnown RBP18.75■□□□□ 0.59
USP47-205ENST00000525257 SLC25A30Q5SVS4 291 aa18.75■□□□□ 0.59
USP47-205ENST00000525257 C1orf146Q5VVC0 180 aa18.75■□□□□ 0.59
USP47-205ENST00000525257 MEDAGQ5VYS4 303 aa18.75■□□□□ 0.59
USP47-205ENST00000525257 RNF152Q8N8N0 203 aa18.75■□□□□ 0.59
USP47-205ENST00000525257 OR5AK2Q8NH90 309 aa18.75■□□□□ 0.59
USP47-205ENST00000525257 MRPL48Q96GC5 212 aaKnown RBP18.75■□□□□ 0.59
USP47-205ENST00000525257 TMEM212A6NML5 194 aa18.74■□□□□ 0.59
USP47-205ENST00000525257 E9PI62 339 aa18.74■□□□□ 0.59
USP47-205ENST00000525257 SDCBPO00560 298 aaPredicted RBP18.74■□□□□ 0.59
USP47-205ENST00000525257 MAGEB3O15480 346 aa18.74■□□□□ 0.59
USP47-205ENST00000525257 RRP9O43818 475 aaKnown RBP18.74■□□□□ 0.59
USP47-205ENST00000525257 ELANEP08246 267 aa18.74■□□□□ 0.59
USP47-205ENST00000525257 GALEQ14376 348 aa18.74■□□□□ 0.59
USP47-205ENST00000525257 FAM53AQ6NSI3 398 aaPredicted RBP18.74■□□□□ 0.59
USP47-205ENST00000525257 RTN4IP1Q8WWV3 396 aaPredicted RBP18.74■□□□□ 0.59
USP47-205ENST00000525257 RBMXL1Q96E39 390 aaKnown RBP18.74■□□□□ 0.59
USP47-205ENST00000525257 RASL11BQ9BPW5 248 aa18.74■□□□□ 0.59
USP47-205ENST00000525257 HSPB9Q9BQS6 159 aa18.74■□□□□ 0.59
USP47-205ENST00000525257 PLSCR3Q9NRY6 295 aa18.74■□□□□ 0.59
USP47-205ENST00000525257 IGHV3-43A0A0B4J1X8 118 aa18.73■□□□□ 0.59
USP47-205ENST00000525257 OR7C1O76099 320 aaPredicted RBP18.73■□□□□ 0.59
USP47-205ENST00000525257 IGHV3-43DP0DP04 118 aa18.73■□□□□ 0.59
USP47-205ENST00000525257 CFHR3Q02985 330 aa18.73■□□□□ 0.59
USP47-205ENST00000525257 ZNF260Q3ZCT1 412 aa18.73■□□□□ 0.59
USP47-205ENST00000525257 SYS1Q8N2H4 156 aa18.73■□□□□ 0.59
USP47-205ENST00000525257 LINC00311Q8N616 119 aa18.73■□□□□ 0.59
USP47-205ENST00000525257 TMEM104Q8NE00 496 aa18.73■□□□□ 0.59
USP47-205ENST00000525257 Q8NFD4 153 aa18.73■□□□□ 0.59
USP47-205ENST00000525257 C4orf3Q8WVX3 66 aa18.73■□□□□ 0.59
USP47-205ENST00000525257 ARL11Q969Q4 196 aa18.73■□□□□ 0.59
USP47-205ENST00000525257 S1PR3Q99500 378 aa18.73■□□□□ 0.59
USP47-205ENST00000525257 TAS2R4Q9NYW5 299 aa18.73■□□□□ 0.59
USP47-205ENST00000525257 ST3GAL6Q9Y274 331 aa18.73■□□□□ 0.59
USP47-205ENST00000525257 RYR2Q92736 4967 aa18.72■□□□□ 0.59
USP47-205ENST00000525257 TMEM30CPA0ZSE6 113 aa18.72■□□□□ 0.59
USP47-205ENST00000525257 ZNF736B4DX44 427 aaPredicted RBP18.72■□□□□ 0.59
USP47-205ENST00000525257 C15orf65H3BRN8 121 aa18.72■□□□□ 0.59
USP47-205ENST00000525257 CDRT1O95170 752 aa18.72■□□□□ 0.59
USP47-205ENST00000525257 MOSP00540 346 aa18.72■□□□□ 0.59
USP47-205ENST00000525257 RPSAP08865 295 aaKnown RBP18.72■□□□□ 0.59
USP47-205ENST00000525257 GZMHP20718 246 aa18.72■□□□□ 0.59
USP47-205ENST00000525257 VDAC1P21796 283 aa18.72■□□□□ 0.59
USP47-205ENST00000525257 SOX2P48431 317 aa18.72■□□□□ 0.59
USP47-205ENST00000525257 ZIK1Q3SY52 487 aaPredicted RBP18.72■□□□□ 0.59
USP47-205ENST00000525257 CCDC107Q8WV48 283 aa18.72■□□□□ 0.59
USP47-205ENST00000525257 GFOD1Q9NXC2 390 aa18.72■□□□□ 0.59
USP47-205ENST00000525257 ZNF256Q9Y2P7 627 aaPredicted RBP18.72■□□□□ 0.59
USP47-205ENST00000525257 SIRT4Q9Y6E7 314 aaPredicted RBP18.72■□□□□ 0.59
USP47-205ENST00000525257 SNTNA6NMZ2 147 aa18.71■□□□□ 0.59
USP47-205ENST00000525257 IGHG4P01861 327 aa18.71■□□□□ 0.59
USP47-205ENST00000525257 IL3RAP26951 378 aa18.71■□□□□ 0.59
USP47-205ENST00000525257 CD1BP29016 333 aa18.71■□□□□ 0.59
USP47-205ENST00000525257 FHL3Q13643 280 aa18.71■□□□□ 0.59
USP47-205ENST00000525257 KLHL22Q53GT1 634 aa18.71■□□□□ 0.59
USP47-205ENST00000525257 ZNF529Q6P280 563 aa18.71■□□□□ 0.59
USP47-205ENST00000525257 ASCL4Q6XD76 172 aa18.71■□□□□ 0.59
USP47-205ENST00000525257 OR52M1Q8NGK5 317 aa18.71■□□□□ 0.59
USP47-205ENST00000525257 ST6GALNAC6Q969X2 333 aa18.71■□□□□ 0.59
USP47-205ENST00000525257 MYCBPQ99417 103 aaPredicted RBP18.71■□□□□ 0.59
USP47-205ENST00000525257 ORC6Q9Y5N6 252 aa18.71■□□□□ 0.59
USP47-205ENST00000525257 GEMIN2O14893 280 aaKnown RBP18.7■□□□□ 0.58
USP47-205ENST00000525257 LY86O95711 162 aa18.7■□□□□ 0.58
USP47-205ENST00000525257 ALPLP05186 524 aa18.7■□□□□ 0.58
USP47-205ENST00000525257 SOX6P35712 828 aa18.7■□□□□ 0.58
USP47-205ENST00000525257 RBM11P57052 281 aaKnown RBP18.7■□□□□ 0.58
USP47-205ENST00000525257 FAM71E2Q8N5Q1 922 aa18.7■□□□□ 0.58
USP47-205ENST00000525257 C8orf31Q8N9H6 132 aa18.7■□□□□ 0.58
USP47-205ENST00000525257 OR11H1Q8NG94 326 aa18.7■□□□□ 0.58
USP47-205ENST00000525257 IFT22Q9H7X7 185 aa18.7■□□□□ 0.58
USP47-205ENST00000525257 ING4Q9UNL4 249 aa18.7■□□□□ 0.58
USP47-205ENST00000525257 SLC31A2O15432 143 aa18.69■□□□□ 0.58
USP47-205ENST00000525257 CHATP28329 748 aa18.69■□□□□ 0.58
USP47-205ENST00000525257 F2RL1P55085 397 aa18.69■□□□□ 0.58
USP47-205ENST00000525257 OR52N1Q8NH53 320 aa18.69■□□□□ 0.58
USP47-205ENST00000525257 NEK7Q8TDX7 302 aa18.69■□□□□ 0.58
USP47-205ENST00000525257 RGP1Q92546 391 aaPredicted RBP18.69■□□□□ 0.58
USP47-205ENST00000525257 KCTD7Q96MP8 289 aa18.69■□□□□ 0.58
USP47-205ENST00000525257 JAM3Q9BX67 310 aa18.69■□□□□ 0.58
USP47-205ENST00000525257 METTL9Q9H1A3 318 aa18.69■□□□□ 0.58
USP47-205ENST00000525257 ERVK13-1Q9NX77 482 aa18.69■□□□□ 0.58
USP47-205ENST00000525257 SACSQ9NZJ4 4579 aa18.68■□□□□ 0.58
USP47-205ENST00000525257 EI24O14681 340 aa18.68■□□□□ 0.58
USP47-205ENST00000525257 PSMB8P28062 276 aa18.68■□□□□ 0.58
USP47-205ENST00000525257 GBX2P52951 348 aaPredicted RBP18.68■□□□□ 0.58
USP47-205ENST00000525257 MRPL28Q13084 256 aaKnown RBP18.68■□□□□ 0.58
USP47-205ENST00000525257 NHLRC3Q5JS37 347 aa18.68■□□□□ 0.58
USP47-205ENST00000525257 ATAD3CQ5T2N8 411 aa18.68■□□□□ 0.58
USP47-205ENST00000525257 OR8H1Q8NGG4 311 aa18.68■□□□□ 0.58
USP47-205ENST00000525257 AMBNQ9NP70 447 aa18.68■□□□□ 0.58
USP47-205ENST00000525257 ORC5O43913 435 aa18.67■□□□□ 0.58
USP47-205ENST00000525257 CSTBP04080 98 aaKnown RBP18.67■□□□□ 0.58
USP47-205ENST00000525257 SERPINA2P20848 420 aa18.67■□□□□ 0.58
USP47-205ENST00000525257 GTF2A1P52655 376 aaPredicted RBP18.67■□□□□ 0.58
USP47-205ENST00000525257 IL36GQ9NZH8 169 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms