RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 OR4C16Q8NGL9 310 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 SPPL2BQ8TCT7 592 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 GPR119Q8TDV5 335 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 GLT1D1Q96MS3 346 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 HINT2Q9BX68 163 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 EBPLQ9BY08 206 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 KRTAP4-1Q9BYQ7 146 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 CXCL16Q9H2A7 254 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 TMBIM4Q9HC24 238 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 TAS2R9Q9NYW1 312 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 KNCNA6PVL3 124 aa1.4□□□□□ -2.19
CD44-215ENST00000525241 RNASEK-C17orf49H0YIS7 233 aa1.4□□□□□ -2.19
CD44-215ENST00000525241 FGF16O43320 207 aa1.4□□□□□ -2.19
CD44-215ENST00000525241 LTAP01374 205 aa1.4□□□□□ -2.19
CD44-215ENST00000525241 INPP1P49441 399 aa1.4□□□□□ -2.19
CD44-215ENST00000525241 ZNF140P52738 457 aaPredicted RBP1.4□□□□□ -2.19
CD44-215ENST00000525241 SS18Q15532 418 aa1.4□□□□□ -2.19
CD44-215ENST00000525241 ACSBG2Q5FVE4 666 aa1.4□□□□□ -2.19
CD44-215ENST00000525241 FAM162BQ5T6X4 162 aa1.4□□□□□ -2.19
CD44-215ENST00000525241 HES3Q5TGS1 186 aa1.4□□□□□ -2.19
CD44-215ENST00000525241 PDCD6IPQ8WUM4 868 aaKnown RBP1.4□□□□□ -2.19
CD44-215ENST00000525241 OR5P2Q8WZ92 322 aa1.4□□□□□ -2.19
CD44-215ENST00000525241 RBMX2Q9Y388 322 aaKnown RBP1.4□□□□□ -2.19
CD44-215ENST00000525241 OR51B4Q9Y5P0 310 aa1.4□□□□□ -2.19
CD44-215ENST00000525241 MTCH2Q9Y6C9 303 aa1.4□□□□□ -2.19
CD44-215ENST00000525241 USH1CQ9Y6N9 552 aa1.4□□□□□ -2.19
CD44-215ENST00000525241 CRB1P82279 1406 aa1.4□□□□□ -2.19
CD44-215ENST00000525241 TRAV8-2A0A0B4J237 113 aa1.39□□□□□ -2.19
CD44-215ENST00000525241 IGSF23A1L1A6 192 aa1.39□□□□□ -2.19
CD44-215ENST00000525241 FAM25EA8MYX2 175 aa1.39□□□□□ -2.19
CD44-215ENST00000525241 C8orf87E5RJ46 101 aa1.39□□□□□ -2.19
CD44-215ENST00000525241 IVLP07476 585 aa1.39□□□□□ -2.19
CD44-215ENST00000525241 RPA3P35244 121 aaPredicted RBP1.39□□□□□ -2.19
CD44-215ENST00000525241 MP68P56378 58 aa1.39□□□□□ -2.19
CD44-215ENST00000525241 TSPAN5P62079 268 aa1.39□□□□□ -2.19
CD44-215ENST00000525241 CD164Q04900 197 aa1.39□□□□□ -2.19
CD44-215ENST00000525241 HES1Q14469 280 aa1.39□□□□□ -2.19
CD44-215ENST00000525241 C18orf21Q32NC0 220 aaPredicted RBP1.39□□□□□ -2.19
CD44-215ENST00000525241 KRTAP21-3Q3LHN1 58 aa1.39□□□□□ -2.19
CD44-215ENST00000525241 TMIGD2Q96BF3 282 aa1.39□□□□□ -2.19
CD44-215ENST00000525241 DDIT4LQ96D03 193 aa1.39□□□□□ -2.19
CD44-215ENST00000525241 LRRC39Q96DD0 335 aa1.39□□□□□ -2.19
CD44-215ENST00000525241 PRSS27Q9BQR3 290 aa1.39□□□□□ -2.19
CD44-215ENST00000525241 TAPBPLQ9BX59 468 aa1.39□□□□□ -2.19
CD44-215ENST00000525241 FBXL15Q9H469 300 aa1.39□□□□□ -2.19
CD44-215ENST00000525241 PSORS1C2Q9UIG4 136 aa1.39□□□□□ -2.19
CD44-215ENST00000525241 NXT1Q9UKK6 140 aaKnown RBP1.39□□□□□ -2.19
CD44-215ENST00000525241 YLPM1P49750 1951 aaKnown RBP1.39□□□□□ -2.19
CD44-215ENST00000525241 SLIT2O94813 1529 aa1.39□□□□□ -2.19
CD44-215ENST00000525241 A0A1W2PRG6 482 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 A8MWP6 167 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 J3QLI3 93 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 PLPP3O14495 311 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 CCNOP22674 350 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 GABRA4P48169 554 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 HSPA13P48723 471 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 C1QTNF8P60827 252 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 RAB2AP61019 212 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 VSNL1P62760 191 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 TSPAN31Q12999 210 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 SSX6Q7RTT6 188 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 PDCL2Q8N4E4 241 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 ZFAND2AQ8N6M9 145 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 ACBD4Q8NC06 268 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 OR2Y1Q8NGV0 311 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 CAPZA3Q96KX2 299 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 PGLYRP3Q96LB9 341 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 DNAJC30Q96LL9 226 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 ZNF251Q9BRH9 671 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 POTEKPQ9BYX7 375 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 BCL2L14Q9BZR8 327 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 RAB1BQ9H0U4 201 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 IFT46Q9NQC8 304 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 TAS2R13Q9NYV9 303 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 MYO15BQ96JP2 1530 aa1.38□□□□□ -2.19
CD44-215ENST00000525241 COL4A2P08572 1712 aa1.37□□□□□ -2.19
CD44-215ENST00000525241 TRPM3Q9HCF6 1732 aaPredicted RBP1.37□□□□□ -2.19
CD44-215ENST00000525241 FCGBPQ9Y6R7 5405 aaPredicted RBP1.37□□□□□ -2.19
CD44-215ENST00000525241 LCTP09848 1927 aa1.37□□□□□ -2.19
CD44-215ENST00000525241 DENRO43583 198 aaKnown RBP1.37□□□□□ -2.19
CD44-215ENST00000525241 EPPINO95925 133 aa1.37□□□□□ -2.19
CD44-215ENST00000525241 CPMP14384 443 aa1.37□□□□□ -2.19
CD44-215ENST00000525241 MAGEA3P43357 314 aa1.37□□□□□ -2.19
CD44-215ENST00000525241 ETV1P50549 477 aa1.37□□□□□ -2.19
CD44-215ENST00000525241 AQP5P55064 265 aa1.37□□□□□ -2.19
CD44-215ENST00000525241 HADHBP55084 474 aaKnown RBP1.37□□□□□ -2.19
CD44-215ENST00000525241 FAM229BQ4G0N7 80 aa1.37□□□□□ -2.19
CD44-215ENST00000525241 SDIM1Q6ZPB5 146 aa1.37□□□□□ -2.19
CD44-215ENST00000525241 CDRT4Q8N9R6 151 aa1.37□□□□□ -2.19
CD44-215ENST00000525241 PRRG3Q9BZD7 231 aa1.37□□□□□ -2.19
CD44-215ENST00000525241 HEY1Q9Y5J3 304 aa1.37□□□□□ -2.19
CD44-215ENST00000525241 A0A0J9YX75 114 aa1.36□□□□□ -2.19
CD44-215ENST00000525241 A0A1B0GW15 77 aa1.36□□□□□ -2.19
CD44-215ENST00000525241 A0A1W2PQL4 384 aaPredicted RBP1.36□□□□□ -2.19
CD44-215ENST00000525241 RAB19A4D1S5 217 aa1.36□□□□□ -2.19
CD44-215ENST00000525241 ERICH4A6NGS2 130 aa1.36□□□□□ -2.19
CD44-215ENST00000525241 NDUFS8O00217 210 aa1.36□□□□□ -2.19
CD44-215ENST00000525241 BRI3O95415 125 aa1.36□□□□□ -2.19
CD44-215ENST00000525241 CRYGDP07320 174 aa1.36□□□□□ -2.19
CD44-215ENST00000525241 ZNF7P17097 686 aaPredicted RBP1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms