RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 ERP44Q9BS26 406 aa4.96□□□□□ -1.62
NEDD8-203ENST00000524927 WFDC10AQ9H1F0 79 aa4.96□□□□□ -1.62
NEDD8-203ENST00000524927 TAS2R5Q9NYW4 299 aa4.96□□□□□ -1.62
NEDD8-203ENST00000524927 RPS6KB2Q9UBS0 482 aa4.96□□□□□ -1.62
NEDD8-203ENST00000524927 IGHV2-26A0A0B4J1V2 119 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 IZUMO1RA6ND01 250 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 GGT3PA6NGU5 568 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 OR2AT4A6NND4 320 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 CD300LBA8K4G0 201 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 LEUTXA8MZ59 168 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 DNALI1O14645 258 aaPredicted RBP4.95□□□□□ -1.62
NEDD8-203ENST00000524927 TFF1P04155 84 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 LGALS1P09382 135 aaKnown RBP4.95□□□□□ -1.62
NEDD8-203ENST00000524927 CD7P09564 240 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 RFTN2Q52LD8 501 aaPredicted RBP4.95□□□□□ -1.62
NEDD8-203ENST00000524927 CEP85LQ5SZL2 805 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 PGAP1Q75T13 922 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 C10orf107Q8IVU9 208 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 OR10Z1Q8NGY1 313 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 OR52P1PQ8NH57 321 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 OR1F12Q8NHA8 337 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 SLCO4A1Q96BD0 722 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 SDSLQ96GA7 329 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 KCNA7Q96RP8 456 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 S1PR3Q99500 378 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 ABCG5Q9H222 651 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 C11orf68Q9H3H3 251 aaKnown RBP4.95□□□□□ -1.62
NEDD8-203ENST00000524927 FNDC4Q9H6D8 234 aaPredicted RBP4.95□□□□□ -1.62
NEDD8-203ENST00000524927 ARMC7Q9H6L4 198 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 LZTFL1Q9NQ48 299 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 C1orf109Q9NX04 203 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 PIGLQ9Y2B2 252 aa4.95□□□□□ -1.62
NEDD8-203ENST00000524927 IGLV7-46A0A075B6I9 117 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 OOSP1A8MZH6 123 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 LRRN3E7EW58 273 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 DLGAP1O14490 977 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 MBD3O95983 291 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 CD74P04233 296 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 HSPB1P04792 205 aaKnown RBP4.94□□□□□ -1.62
NEDD8-203ENST00000524927 TPM3P06753 285 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 ZNF728P0DKX0 622 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 CEACAM3P40198 252 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 MDH1P40925 334 aaKnown RBP4.94□□□□□ -1.62
NEDD8-203ENST00000524927 GABRA2P47869 451 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 ABCE1P61221 599 aaKnown RBP4.94□□□□□ -1.62
NEDD8-203ENST00000524927 HERV-K104P63124 156 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 BDH1Q02338 343 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 FMODQ06828 376 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 HES1Q14469 280 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 DEFB135Q30KP9 77 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 ULK3Q6PHR2 472 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 IL34Q6ZMJ4 242 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 DPY19L4Q7Z388 723 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 WDR86Q86TI4 376 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 CLEC4FQ8N1N0 589 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 C6orf223Q8N319 242 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 FBXO36Q8NEA4 188 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 OR1M1Q8NGA1 313 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 OR2T27Q8NH04 317 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 FNDC8Q8TC99 324 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 CREB3L1Q96BA8 519 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 RCN3Q96D15 328 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 KCTD7Q96MP8 289 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 IFNKQ9P0W0 207 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 ZNF222Q9UK12 451 aa4.94□□□□□ -1.62
NEDD8-203ENST00000524927 IGKV1D-17A0A075B6S4 117 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 A0A0U1RQV1 116 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 A0A1B0GWA3 101 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 A0A1W2PRG6 482 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 SRRM4A7MD48 611 aaKnown RBP4.93□□□□□ -1.62
NEDD8-203ENST00000524927 A8MT66 165 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 TMEM114B3SHH9 223 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 HMGN4O00479 90 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 BHLHE40O14503 412 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 CCSO14618 274 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 CDIPTO14735 213 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 IFNA21P01568 189 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 IFNA17P01571 189 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 RAB9AP51151 201 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 DAP3P51398 398 aaKnown RBP4.93□□□□□ -1.62
NEDD8-203ENST00000524927 APOC4P55056 127 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 ERVK-16P61578 105 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 TPM4P67936 248 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 RAB40BQ12829 278 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 SYPL1Q16563 259 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 UNC50Q53HI1 259 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 ZCCHC23Q6ZST2 131 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 Q6ZTC4 211 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 CYS1Q717R9 158 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 TGIF2LXQ8IUE1 241 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 ABHD12Q8N2K0 398 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 OR10G7Q8NGN6 311 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 ITFG2Q969R8 447 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 MAGOHBQ96A72 148 aaKnown RBP4.93□□□□□ -1.62
NEDD8-203ENST00000524927 SGTBQ96EQ0 304 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 TMEM43Q9BTV4 400 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 FUNDC2Q9BWH2 189 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 TLNRD1Q9H1K6 362 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 C1orf21Q9H246 121 aa4.93□□□□□ -1.62
NEDD8-203ENST00000524927 YY1AP1Q9H869 796 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms