RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 CD40P25942 277 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 CD34P28906 385 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 GATA4P43694 442 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 NPBWR2P48146 333 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 SELENOVP59797 346 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 RND3P61587 244 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 ZNF154Q13106 437 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 ZNF345Q14585 488 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 MSMO1Q15800 293 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 NKPD1Q17RQ9 610 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 SMIM21Q3B7S5 101 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 FAM209AQ5JX71 171 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 RGS7BPQ6MZT1 257 aaPredicted RBP5.96□□□□□ -1.46
VPS11-201ENST00000524454 TRAT1Q6PIZ9 186 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 TMEM108Q6UXF1 575 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 Q71RC1 249 aaPredicted RBP5.96□□□□□ -1.46
VPS11-201ENST00000524454 KCTD9Q7L273 389 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 NLRC3Q7RTR2 1065 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 TMED4Q7Z7H5 227 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 TGIF2LYQ8IUE0 185 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 SLC38A6Q8IZM9 456 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 CIARTQ8N365 385 aaPredicted RBP5.96□□□□□ -1.46
VPS11-201ENST00000524454 LRTM2Q8N967 370 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 SCCPDHQ8NBX0 429 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 OR4A4PQ8NGN8 299 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 MARCH1Q8TCQ1 289 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 TMEM171Q8WVE6 324 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 SLAMF9Q96A28 289 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 MOB3AQ96BX8 217 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 SYT3Q9BQG1 590 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 FAAP24Q9BTP7 215 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 CABLES2Q9BTV7 478 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 ST6GALNAC5Q9BVH7 336 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 SSBP4Q9BWG4 385 aaPredicted RBP5.96□□□□□ -1.46
VPS11-201ENST00000524454 SUCNR1Q9BXA5 334 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 BEX2Q9BXY8 128 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 NMES1Q9C002 83 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 NCOR1P1Q9H4R4 102 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 GSX1Q9H4S2 264 aaPredicted RBP5.96□□□□□ -1.46
VPS11-201ENST00000524454 C5orf66Q9H5L9 145 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 FN3KRPQ9HA64 309 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 Q9N2K0 584 aa5.96□□□□□ -1.46
VPS11-201ENST00000524454 BEX4Q9NWD9 120 aaPredicted RBP5.96□□□□□ -1.46
VPS11-201ENST00000524454 CISD1Q9NZ45 108 aaKnown RBP5.96□□□□□ -1.46
VPS11-201ENST00000524454 HEATR1Q9H583 2144 aaKnown RBP5.95□□□□□ -1.46
VPS11-201ENST00000524454 DUXBA0A1W2PPF3 345 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 PLSCR5A0PG75 271 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 CRYM-AS1A6NIL9 109 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 RFPL4AA6NLU0 287 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 A8MV72 311 aaPredicted RBP5.95□□□□□ -1.46
VPS11-201ENST00000524454 TRDCB7Z8K6 153 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 RFPL4AL1F8VTS6 287 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 F8W735 103 aaPredicted RBP5.95□□□□□ -1.46
VPS11-201ENST00000524454 G3V3Q6 166 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 SH2D1BO14796 132 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 SMAD7O15105 426 aaKnown RBP5.95□□□□□ -1.46
VPS11-201ENST00000524454 MLNRO43193 412 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 SYNGR1O43759 233 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 TIMM8AO60220 97 aaPredicted RBP5.95□□□□□ -1.46
VPS11-201ENST00000524454 TUSC2O75896 110 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 SFT2D2O95562 160 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 PLATP00750 562 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 DANCRP0C864 163 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 RPS2P15880 293 aaKnown RBP5.95□□□□□ -1.46
VPS11-201ENST00000524454 RPA2P15927 270 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 PRKACAP17612 351 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 H2BFSP57053 126 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 KLF3P57682 345 aaPredicted RBP5.95□□□□□ -1.46
VPS11-201ENST00000524454 PPP1R1AQ13522 171 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 LY6G6FQ5SQ64 297 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 LAMTOR1Q6IAA8 161 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 Q6P435 159 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 Q6ZS46 218 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 SGPP2Q8IWX5 399 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 CCDC71LQ8N9Z2 235 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 BHLHE23Q8NDY6 225 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 CAPSLQ8WWF8 208 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 IGFBPL1Q8WX77 278 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 Q96MF0 132 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 TMEM246Q9BRR3 403 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 RSRP1Q9BUV0 290 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 DPCDQ9BVM2 203 aaPredicted RBP5.95□□□□□ -1.46
VPS11-201ENST00000524454 TOLLIPQ9H0E2 274 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 CA10Q9NS85 328 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 ZFP57Q9NU63 452 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 MBNL3Q9NUK0 354 aaKnown RBP5.95□□□□□ -1.46
VPS11-201ENST00000524454 C1orf123Q9NWV4 160 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 FBXO9Q9UK97 447 aaPredicted RBP5.95□□□□□ -1.46
VPS11-201ENST00000524454 ZDHHC8Q9ULC8 765 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 WIPI2Q9Y4P8 454 aa5.95□□□□□ -1.46
VPS11-201ENST00000524454 TRBV6-7A0A0A0MS04 114 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 TRAV24A0A0B4J272 114 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 TMEM238LA0A1B0GVL6 79 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 OR5H14A6NHG9 310 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 VSTM5A8MXK1 200 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 M0R233 179 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 NXPH2O95156 264 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 IFNA2P01563 188 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 CD55P08174 381 aa5.94□□□□□ -1.46
VPS11-201ENST00000524454 ZNF728P0DKX0 622 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms