RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 SDC2P34741 201 aa13.51□□□□□ -0.25
CSGALNACT1-216ENST00000524213 PRAMEF5Q5TYX0 476 aa13.51□□□□□ -0.25
CSGALNACT1-216ENST00000524213 ZNF626Q68DY1 528 aa13.51□□□□□ -0.25
CSGALNACT1-216ENST00000524213 GAPTQ8N292 157 aa13.51□□□□□ -0.25
CSGALNACT1-216ENST00000524213 FAM89BQ8N5H3 189 aa13.51□□□□□ -0.25
CSGALNACT1-216ENST00000524213 ZNF596Q8TC21 504 aa13.51□□□□□ -0.25
CSGALNACT1-216ENST00000524213 SSMEM1Q8WWF3 244 aa13.51□□□□□ -0.25
CSGALNACT1-216ENST00000524213 PTX4Q96A99 478 aa13.51□□□□□ -0.25
CSGALNACT1-216ENST00000524213 NICN1Q9BSH3 213 aa13.51□□□□□ -0.25
CSGALNACT1-216ENST00000524213 CENPOQ9BU64 300 aa13.51□□□□□ -0.25
CSGALNACT1-216ENST00000524213 DPAGT1Q9H3H5 408 aa13.51□□□□□ -0.25
CSGALNACT1-216ENST00000524213 LINC00574Q9H8X3 128 aa13.51□□□□□ -0.25
CSGALNACT1-216ENST00000524213 LIN7BQ9HAP6 207 aa13.51□□□□□ -0.25
CSGALNACT1-216ENST00000524213 IDI2-AS1Q9NZ38 188 aa13.51□□□□□ -0.25
CSGALNACT1-216ENST00000524213 HSF4Q9ULV5 492 aa13.51□□□□□ -0.25
CSGALNACT1-216ENST00000524213 POMT1Q9Y6A1 747 aa13.51□□□□□ -0.25
CSGALNACT1-216ENST00000524213 METTL21EPA6NDL7 271 aa13.5□□□□□ -0.25
CSGALNACT1-216ENST00000524213 ODF3BA8MYP8 253 aa13.5□□□□□ -0.25
CSGALNACT1-216ENST00000524213 NPIPB11E5RHQ5 1161 aa13.5□□□□□ -0.25
CSGALNACT1-216ENST00000524213 MMP23AO75900 390 aa13.5□□□□□ -0.25
CSGALNACT1-216ENST00000524213 MELTFP08582 738 aa13.5□□□□□ -0.25
CSGALNACT1-216ENST00000524213 CD34P28906 385 aa13.5□□□□□ -0.25
CSGALNACT1-216ENST00000524213 DYNC1I2Q13409 638 aaKnown RBP13.5□□□□□ -0.25
CSGALNACT1-216ENST00000524213 MINOS1Q5TGZ0 78 aa13.5□□□□□ -0.25
CSGALNACT1-216ENST00000524213 SLC16A12Q6ZSM3 486 aa13.5□□□□□ -0.25
CSGALNACT1-216ENST00000524213 ABHD12Q8N2K0 398 aa13.5□□□□□ -0.25
CSGALNACT1-216ENST00000524213 OR13F1Q8NGS4 319 aa13.5□□□□□ -0.25
CSGALNACT1-216ENST00000524213 ZNRD1Q9P1U0 126 aa13.5□□□□□ -0.25
CSGALNACT1-216ENST00000524213 MINOS1-NBL1R4GNA1 71 aa13.5□□□□□ -0.25
CSGALNACT1-216ENST00000524213 A0A087X0M5 115 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 A0A1B0GX30 115 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 BTBD17A6NE02 478 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 HOXA3O43365 443 aaPredicted RBP13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 OMGP23515 440 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 VEGFCP49767 419 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 PRRX1P54821 245 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 SCAND1P57086 179 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 SLC9A3R2Q15599 337 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 TMEM30BQ3MIR4 351 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 SFXN4Q6P4A7 337 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 Q6ZTK2 550 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 C6orf201Q7Z4U5 140 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 ZNF554Q86TJ5 538 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 NR2C2APQ86WQ0 139 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 CROCCP3Q8IVE0 287 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 BEND2Q8NDZ0 799 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 OR52M1Q8NGK5 317 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 OR4K15Q8NH41 348 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 CCDC107Q8WV48 283 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 ARL11Q969Q4 196 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 MALSU1Q96EH3 234 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 KIRREL1Q96J84 757 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 SULT4A1Q9BR01 284 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 MEGF9Q9H1U4 602 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 RIMS4Q9H426 269 aaPredicted RBP13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 RNF167Q9H6Y7 350 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 KCNIP1Q9NZI2 227 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 DAPK2Q9UIK4 370 aa13.49□□□□□ -0.25
CSGALNACT1-216ENST00000524213 ANK2Q01484 3957 aa13.48□□□□□ -0.25
CSGALNACT1-216ENST00000524213 A0A0A6YYD4 124 aa13.48□□□□□ -0.25
CSGALNACT1-216ENST00000524213 TMEM89A2RUT3 159 aa13.48□□□□□ -0.25
CSGALNACT1-216ENST00000524213 SMIM30A4D0T7 59 aa13.48□□□□□ -0.25
CSGALNACT1-216ENST00000524213 TOR1AO14656 332 aa13.48□□□□□ -0.25
CSGALNACT1-216ENST00000524213 SOCS1O15524 211 aa13.48□□□□□ -0.25
CSGALNACT1-216ENST00000524213 SPINT2O43291 252 aa13.48□□□□□ -0.25
CSGALNACT1-216ENST00000524213 RNASE1P07998 156 aaKnown RBP13.48□□□□□ -0.25
CSGALNACT1-216ENST00000524213 NFYBP25208 207 aa13.48□□□□□ -0.25
CSGALNACT1-216ENST00000524213 IER3P46695 156 aa13.48□□□□□ -0.25
CSGALNACT1-216ENST00000524213 MXD1Q05195 221 aa13.48□□□□□ -0.25
CSGALNACT1-216ENST00000524213 GCDHQ92947 438 aaPredicted RBP13.48□□□□□ -0.25
CSGALNACT1-216ENST00000524213 CREB3L1Q96BA8 519 aa13.48□□□□□ -0.25
CSGALNACT1-216ENST00000524213 FAAP24Q9BTP7 215 aa13.48□□□□□ -0.25
CSGALNACT1-216ENST00000524213 FUNDC2Q9BWH2 189 aa13.48□□□□□ -0.25
CSGALNACT1-216ENST00000524213 MBNL3Q9NUK0 354 aaKnown RBP13.48□□□□□ -0.25
CSGALNACT1-216ENST00000524213 TRAV39A0A0B4J263 110 aa13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 POM121CA8CG34 1229 aa13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 FOXI3A8MTJ6 420 aaPredicted RBP13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 SCGNO76038 276 aa13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 CLEC2LP0C7M8 214 aa13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 SLC2A2P11168 524 aaPredicted RBP13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 HTR1DP28221 377 aa13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 SSTR5P35346 364 aa13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 GDNFP39905 211 aa13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 ARL6IP1Q15041 203 aa13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 AANATQ16613 207 aa13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 C16orf87Q6PH81 154 aa13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 C12orf54Q6X4T0 127 aa13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 OR5R1Q8NH85 324 aa13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 OR9G1Q8NH87 305 aa13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 RFESDQ8TAC1 157 aa13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 NDNFQ8TB73 568 aa13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 MRPL30Q8TCC3 161 aaKnown RBP13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 DYRK2Q92630 601 aa13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 CHMP1AQ9HD42 196 aaPredicted RBP13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 MGAT4AQ9UM21 535 aa13.47□□□□□ -0.25
CSGALNACT1-216ENST00000524213 C15orf65H3BRN8 121 aa13.46□□□□□ -0.25
CSGALNACT1-216ENST00000524213 CEACAM3P40198 252 aa13.46□□□□□ -0.25
CSGALNACT1-216ENST00000524213 TMEM50BP56557 158 aa13.46□□□□□ -0.25
CSGALNACT1-216ENST00000524213 HLA-DRB5Q30154 266 aa13.46□□□□□ -0.25
CSGALNACT1-216ENST00000524213 Q3ZCU0 254 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms