RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	SLC25A47	Q6Q0C1	308 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	FAM57B	Q71RH2	274 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	P2RY8	Q86VZ1	359 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	STPG2	Q8N412	459 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	STX19	Q8N4C7	294 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	ATP6V1C2	Q8NEY4	427 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	OR51D1	Q8NGF3	324 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	OR5AK3P	Q8NH89	298 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	ZFP90	Q8TF47	636 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	FLYWCH2	Q96CP2	140 aa	Known RBP	4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	ZHX1-C8orf76	Q96EF9	292 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	MRPL48	Q96GC5	212 aa	Known RBP	4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	FAM210B	Q96KR6	192 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	CNN2	Q99439	309 aa	Known RBP	4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	LPAR4	Q99677	370 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	TCEAL7	Q9BRU2	100 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	SUCNR1	Q9BXA5	334 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	EBPL	Q9BY08	206 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	TMEM38A	Q9H6F2	299 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	NT5DC2	Q9H857	520 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	RETN	Q9HD89	108 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	CLN6	Q9NWW5	311 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	IMPAD1	Q9NX62	359 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	C19orf25	Q9UFG5	118 aa	Predicted RBP	4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	TCF19	Q9Y242	345 aa		4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	TET2	Q6N021	2002 aa	Predicted RBP	4.22	□□□□□ -1.73
PABPC1-223	ENST00000523636	MUC2	Q02817	5179 aa		4.21	□□□□□ -1.73
PABPC1-223	ENST00000523636	HEATR1	Q9H583	2144 aa	Known RBP	4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636		A0A1B0GV72	72 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	IRGM	A1A4Y4	181 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	ARRDC5	A6NEK1	342 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	EFCAB9	A8MZ26	197 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	ZNF732	B4DXR9	585 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	DISC1	C4P0D8	188 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636		H0YGG7	62 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636		H7C417	338 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	PLPP3	O14495	311 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	TCAP	O15273	167 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	FGF16	O43320	207 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	OR2J2	O76002	312 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	KRT33A	O76009	404 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	GABARAP	O95166	117 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	MPZL1	O95297	269 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	C1orf105	O95561	183 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	IFNA21	P01568	189 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	SEMG1	P04279	462 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	FBP1	P09467	338 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	MGMT	P16455	207 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	PSMB9	P28065	219 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	RCVRN	P35243	200 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	GGT2	P36268	569 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	POLR2I	P36954	125 aa	Known RBP	4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	CRYBA4	P53673	196 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	DEFA1	P59665	94 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	DEFA3	P59666	94 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	NANOS3	P60323	173 aa	Known RBP	4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	CDK6	Q00534	326 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	KLF5	Q13887	457 aa	Predicted RBP	4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	MEF2D	Q14814	521 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	PTGES3	Q15185	160 aa	Known RBP	4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	CTF1	Q16619	201 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	MICA	Q29983	383 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	MS4A18	Q3C1V0	323 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	UBE2U	Q5VVX9	321 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	OR4A47	Q6IF82	309 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	SLC18B1	Q6NT16	456 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	ACSM5	Q6NUN0	579 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	ZNF544	Q6NX49	715 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	BTNL3	Q6UXE8	466 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	TMEM64	Q6YI46	380 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	STAC2	Q6ZMT1	411 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	GDPGP1	Q6ZNW5	385 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	TMED4	Q7Z7H5	227 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	TMEM179B	Q7Z7N9	219 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	SLC35F2	Q8IXU6	374 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	CENPS	Q8N2Z9	138 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	ZNF561	Q8N587	486 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	PLPP5	Q8NEB5	264 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	DMBX1	Q8NFW5	382 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	OR9Q2	Q8NGE9	314 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	OR10W1	Q8NGF6	305 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	OR9Q1	Q8NGQ5	310 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	RHOXF1	Q8NHV9	184 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	ZPLD1	Q8TCW7	415 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	C16orf78	Q8WTQ4	265 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	GEMIN6	Q8WXD5	167 aa	Known RBP	4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	OR5P2	Q8WZ92	322 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	BPIFA2	Q96DR5	249 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	TXNDC15	Q96J42	360 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	ZNF300	Q96RE9	604 aa	Predicted RBP	4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	TSNAX	Q99598	290 aa	Known RBP	4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	PITX2	Q99697	317 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	ATP5S	Q99766	215 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	ATF6B	Q99941	703 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	B9D2	Q9BPU9	175 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	AIF1L	Q9BQI0	150 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	SLC35A5	Q9BS91	424 aa		4.21	□□□□□ -1.74
PABPC1-223	ENST00000523636	C2orf88	Q9BSF0	95 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms