RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 CIB4A0PJX0 185 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 OR5H1A6NKK0 313 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 E5RI56 91 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 CLPXO76031 633 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 CST1P01037 141 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 STAG3L2P0CL84 134 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 KDELR1P24390 212 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 RPL22P35268 128 aaKnown RBP3.36□□□□□ -1.87
CPNE3-206ENST00000523469 PLCXD2Q0VAA5 305 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 NNATQ16517 81 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 C5orf47Q569G3 176 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 TMEM53Q6P2H8 277 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 DEGS2Q6QHC5 323 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 TMEM107Q6UX40 140 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 LINC00173Q6ZV60 143 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 LINC00523Q86TU6 105 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 FAM9CQ8IZT9 166 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 MREGQ8N565 214 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 OR4S1Q8NGB4 309 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 POP5Q969H6 163 aaKnown RBP3.36□□□□□ -1.87
CPNE3-206ENST00000523469 PPWD1Q96BP3 646 aaKnown RBP3.36□□□□□ -1.87
CPNE3-206ENST00000523469 ARL5BQ96KC2 179 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 VAT1Q99536 393 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 CENPKQ9BS16 269 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 CENPHQ9H3R5 247 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 RWDD2AQ9UIY3 292 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 RPUSD1Q9UJJ7 312 aaKnown RBP3.36□□□□□ -1.87
CPNE3-206ENST00000523469 ZNF337Q9Y3M9 751 aa3.36□□□□□ -1.87
CPNE3-206ENST00000523469 IGHV3-66A0A0C4DH42 116 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 MDFIC2A0A1B0GVS7 189 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 BTNL10A8MVZ5 291 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 hCG_2039718K7EN88 272 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 NIPSNAP2O75323 286 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 APOA1P02647 267 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 C2P06681 752 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 SERPINA6P08185 405 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 MRPL3P09001 348 aaKnown RBP3.35□□□□□ -1.87
CPNE3-206ENST00000523469 TTPAP49638 278 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 BCAP31P51572 246 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 NCBP2P52298 156 aaKnown RBP eCLIP3.35□□□□□ -1.87
CPNE3-206ENST00000523469 DSCR4P56555 118 aaPredicted RBP3.35□□□□□ -1.87
CPNE3-206ENST00000523469 RAB11AP62491 216 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 ACTA2P62736 377 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 ACTC1P68032 377 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 SLAMF1Q13291 335 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 TGFBIQ15582 683 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 RAB11BQ15907 218 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 ACSBG2Q5FVE4 666 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 LRRC74BQ6ZQY2 392 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 Q6ZT83 130 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 SSX9Q7RTT3 188 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 H2BFWTQ7Z2G1 175 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 GALNT10Q86SR1 603 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 PUSL1Q8N0Z8 303 aaKnown RBP3.35□□□□□ -1.87
CPNE3-206ENST00000523469 ZCCHC24Q8N2G6 241 aaKnown RBP3.35□□□□□ -1.87
CPNE3-206ENST00000523469 LINC00469Q8N7U9 141 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 OR10G4Q8NGN3 311 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 OR2G2Q8NGZ5 317 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 OR10D3Q8NH80 312 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 SLC38A4Q969I6 547 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 HAUS1Q96CS2 278 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 PLEKHA8Q96JA3 519 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 FMO2Q99518 471 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 SH3GL1Q99961 368 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 SH3GL3Q99963 347 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 SPACA1Q9HBV2 294 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 PAQR5Q9NXK6 330 aaPredicted RBP3.35□□□□□ -1.87
CPNE3-206ENST00000523469 AHSPQ9NZD4 102 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 OPN4Q9UHM6 478 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 PEX16Q9Y5Y5 336 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 BZW2Q9Y6E2 419 aaKnown RBP3.35□□□□□ -1.87
CPNE3-206ENST00000523469 DNAH7Q8WXX0 4024 aa3.35□□□□□ -1.87
CPNE3-206ENST00000523469 HECTD4Q9Y4D8 3996 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 SMCO3A2RU48 225 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 H7C0C1 242 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 LSM1O15116 133 aaKnown RBP3.34□□□□□ -1.87
CPNE3-206ENST00000523469 UGT2B11O75310 529 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 ENTPD5O75356 428 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 H6PDO95479 791 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 OR4A8P0C604 315 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 TLX1NBP0CAT3 122 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 ETS2P15036 469 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 OTX1P32242 354 aaPredicted RBP3.34□□□□□ -1.87
CPNE3-206ENST00000523469 RFX3P48380 749 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 LCN2P80188 198 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 REEP5Q00765 189 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 STX5Q13190 355 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 AGTRAPQ6RW13 159 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 PP632Q6XCG6 107 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 MBOAT1Q6ZNC8 495 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 DGAT2L6Q6ZPD8 337 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 LRRC6Q86X45 466 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 WDFY1Q8IWB7 410 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 MICU2Q8IYU8 434 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 ABHD3Q8WU67 409 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 STMN2Q93045 179 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 HGDQ93099 445 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 PPP1R2P1Q96PQ5 205 aa3.34□□□□□ -1.87
CPNE3-206ENST00000523469 QKIQ96PU8 341 aaKnown RBP eCLIP3.34□□□□□ -1.87
CPNE3-206ENST00000523469 RARRES2Q99969 163 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms