RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 LINC00482Q8N8I6 264 aa9.31□□□□□ -0.92
CTNNA1-237ENST00000523275 OR52M1Q8NGK5 317 aa9.31□□□□□ -0.92
CTNNA1-237ENST00000523275 ARL11Q969Q4 196 aa9.31□□□□□ -0.92
CTNNA1-237ENST00000523275 NOL4LQ96MY1 436 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-237ENST00000523275 SMPD3Q9NY59 655 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-237ENST00000523275 C15orf65H3BRN8 121 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 K7EIL1 84 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 CCRL2O00421 344 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 SDCBPO00560 298 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 HSD17B6O14756 317 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 ORC5O43913 435 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 BAG2O95816 211 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 IGHG2P01859 326 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 GTF2F2P13984 249 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 MYL12AP19105 171 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 SERPINA2P20848 420 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 KRTAP10-11P60412 298 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 RPL23AP62750 156 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 ZNF816Q0VGE8 651 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 RIPK1Q13546 671 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 EBI3Q14213 229 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 MPV17LQ2QL34 196 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 SLC22A6Q4U2R8 563 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 ATAD3CQ5T2N8 411 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 SLC35E3Q7Z769 313 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 MOB3BQ86TA1 216 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 MRPL41Q8IXM3 137 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 C8orf31Q8N9H6 132 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 OR51D1Q8NGF3 324 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 NEK7Q8TDX7 302 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 CCDC107Q8WV48 283 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 GHSRQ92847 366 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 ORAI1Q96D31 301 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 SMIM19Q96E16 107 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 RDH12Q96NR8 316 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 ZNF184Q99676 751 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 ZFP57Q9NU63 452 aa9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 DIMT1Q9UNQ2 313 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-237ENST00000523275 IGHV1-3A0A0C4DH29 117 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 GPX5O75715 221 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 MT-ND4P03905 459 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 IGFBP3P17936 291 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 SLC6A1P30531 599 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 REG1BP48304 166 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 THBS3P49746 956 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 SLC35B1P78383 322 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 GPR176Q14439 515 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 DEFB121Q5J5C9 76 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 DMKNQ6E0U4 476 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 ZNF497Q6ZNH5 498 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 OR2W3Q7Z3T1 314 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 FOXRED2Q8IWF2 684 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 STX19Q8N4C7 294 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 LINC00311Q8N616 119 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 COMMD1Q8N668 190 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 OR13C5Q8NGS8 318 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 TMEM80Q96HE8 168 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 EAF1Q96JC9 268 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 GPR61Q9BZJ8 451 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 CHCHD3Q9NX63 227 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 GFOD1Q9NXC2 390 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 CKLFQ9UBR5 152 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 CLEC2DQ9UHP7 191 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 LINC00527Q9UJ94 153 aa9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 EXOSC1Q9Y3B2 195 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-237ENST00000523275 IGHV3-72A0A0B4J1Y9 119 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 TRBV5-5A0A0J9YX44 114 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 A0A1W2PP11 408 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 WI2-2373I1.2A0A1W2PRP0 233 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 LINC01548A6NM66 108 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 NCBP2LA6PVI3 153 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 NUDT19A8MXV4 375 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 LALBAP00709 142 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 IL3RAP26951 378 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 HOXD3P31249 432 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 MYCNOSP40205 109 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 RPS11P62280 158 aaKnown RBP eCLIP9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 EGFEM1PQ0D2K5 195 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 MED21Q13503 144 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 Q499Y3 187 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 YIF1BQ5BJH7 314 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 ETV3LQ6ZN32 361 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 TGIF2LXQ8IUE1 241 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 IZUMO1Q8IYV9 350 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 STPG2Q8N412 459 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 OR2T10Q8NGZ9 312 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 UBALD1Q8TB05 177 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 DPF1Q92782 380 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 MRPS24Q96EL2 167 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 MCRIP2Q9BUT9 160 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 SPACA1Q9HBV2 294 aa9.28□□□□□ -0.92
CTNNA1-237ENST00000523275 TRAV8-7A0A075B6U6 113 aa9.27□□□□□ -0.93
CTNNA1-237ENST00000523275 IGHV3-43A0A0B4J1X8 118 aa9.27□□□□□ -0.93
CTNNA1-237ENST00000523275 MCRIP1C9JLW8 97 aa9.27□□□□□ -0.93
CTNNA1-237ENST00000523275 AIPO00170 330 aa9.27□□□□□ -0.93
CTNNA1-237ENST00000523275 AP4M1O00189 453 aa9.27□□□□□ -0.93
CTNNA1-237ENST00000523275 EBAG9O00559 213 aa9.27□□□□□ -0.93
CTNNA1-237ENST00000523275 SPINT2O43291 252 aa9.27□□□□□ -0.93
CTNNA1-237ENST00000523275 IGHV3-43DP0DP04 118 aa9.27□□□□□ -0.93
CTNNA1-237ENST00000523275 CD1BP29016 333 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms