RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 HSD17B11Q8NBQ5 300 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 OR10H4Q8NGA5 316 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 OR9G1Q8NH87 305 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 LYPD6BQ8NI32 183 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 FANK1Q8TC84 345 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 PIFOQ8TCI5 191 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 SKA2Q8WVK7 121 aaPredicted RBP2.23□□□□□ -2.05
CPNE3-204ENST00000517862 STMN2Q93045 179 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 PPP1R14BQ96C90 147 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 RPUSD4Q96CM3 377 aaKnown RBP2.23□□□□□ -2.05
CPNE3-204ENST00000517862 C8orf76Q96K31 380 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 TSPAN32Q96QS1 320 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 PELOQ9BRX2 385 aaKnown RBP2.23□□□□□ -2.05
CPNE3-204ENST00000517862 TMEM70Q9BUB7 260 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 KRTAP2-1Q9BYU5 128 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 ACTR3CQ9C0K3 210 aaPredicted RBP2.23□□□□□ -2.05
CPNE3-204ENST00000517862 IL22Q9GZX6 179 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 GBA3Q9H227 469 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 OR51B6Q9H340 312 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 TRABDQ9H4I3 376 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 LZTFL1Q9NQ48 299 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 TMEM106BQ9NUM4 274 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 CLEC5AQ9NY25 188 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 VNN3Q9NY84 501 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 DPM3Q9P2X0 92 aa2.23□□□□□ -2.05
CPNE3-204ENST00000517862 NOSIPQ9Y314 301 aaKnown RBP2.23□□□□□ -2.05
CPNE3-204ENST00000517862 IGLV3-16A0A075B6K0 115 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 IGHV3OR16-13A0A075B7E8 117 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 TRBV9A0A0B4J1U6 114 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 C12orf71A8MTZ7 269 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 ZNF99A8MXY4 864 aaPredicted RBP2.22□□□□□ -2.05
CPNE3-204ENST00000517862 TMEM114B3SHH9 223 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 OVOL1O14753 267 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 PHYHO14832 338 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 EIF4E2O60573 245 aaKnown RBP2.22□□□□□ -2.05
CPNE3-204ENST00000517862 IGKV3-15P01624 115 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 HLA-DQB2P05538 268 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 C2P06681 752 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 CTRB1P17538 263 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 MSR1P21757 451 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 HSD17B2P37059 387 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 CX3CR1P49238 355 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 MRPL19P49406 292 aaKnown RBP2.22□□□□□ -2.05
CPNE3-204ENST00000517862 RORCP51449 518 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 PSMD4P55036 377 aaKnown RBP2.22□□□□□ -2.05
CPNE3-204ENST00000517862 KLF3P57682 345 aaPredicted RBP2.22□□□□□ -2.05
CPNE3-204ENST00000517862 ERVK-25P63136 954 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 PLCXD2Q0VAA5 305 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 SLAQ13239 276 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 KLRD1Q13241 179 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 KCTD19Q17RG1 926 aaPredicted RBP2.22□□□□□ -2.05
CPNE3-204ENST00000517862 FAM182AQ5T1J6 154 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 CTRB2Q6GPI1 263 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 FAM122BQ7Z309 247 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 FAM220AQ7Z4H9 259 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 LHFPL3Q86UP9 236 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 THOC6Q86W42 341 aaKnown RBP2.22□□□□□ -2.05
CPNE3-204ENST00000517862 PDIK1LQ8N165 341 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 CADM2Q8N3J6 435 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 ZFP41Q8N8Y5 198 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 PRELID2Q8N945 189 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 ASCC1Q8N9N2 400 aaKnown RBP2.22□□□□□ -2.05
CPNE3-204ENST00000517862 TMEM104Q8NE00 496 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 BLOC1S5Q8TDH9 187 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 GEMIN6Q8WXD5 167 aaKnown RBP2.22□□□□□ -2.05
CPNE3-204ENST00000517862 CACNG8Q8WXS5 425 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 NEIL2Q969S2 332 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 TMEM106AQ96A25 262 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 APOL2Q9BQE5 337 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 NDEL1Q9GZM8 345 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 Q9H3A6 140 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 KIF25Q9UIL4 384 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 ING4Q9UNL4 249 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 UGT2A1Q9Y4X1 527 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 FLVCR1Q9Y5Y0 555 aa2.22□□□□□ -2.05
CPNE3-204ENST00000517862 BZW2Q9Y6E2 419 aaKnown RBP2.22□□□□□ -2.05
CPNE3-204ENST00000517862 A6NDX4 124 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 CCRL2O00421 344 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 MRPL33O75394 65 aaKnown RBP2.21□□□□□ -2.06
CPNE3-204ENST00000517862 IGHV1-46P01743 117 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 CD74P04233 296 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 KRT16P08779 473 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 CCDC172P0C7W6 258 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 NR2C1P13056 603 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 NPBWR2P48146 333 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 RGS6P49758 472 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 DLX1P56177 255 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 ATP6V0D1P61421 351 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 GLO1Q04760 184 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 REG3AQ06141 175 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 ECH1Q13011 328 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 STX5Q13190 355 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 LRRC36Q1X8D7 754 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 GSG1Q2KHT4 349 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 OR2B11Q5JQS5 317 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 C1orf100Q5SVJ3 147 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 CGB2Q6NT52 195 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 MRPL21Q7Z2W9 205 aaKnown RBP2.21□□□□□ -2.06
CPNE3-204ENST00000517862 SNX20Q7Z614 316 aa2.21□□□□□ -2.06
CPNE3-204ENST00000517862 PPP1R27Q86WC6 154 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms