RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 ZNF705GA8MUZ8 300 aaPredicted RBP2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 K7EPK0 472 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 SS18L1O75177 396 aaPredicted RBP2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 MMP23AO75900 390 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 IGLV1-44P01699 117 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 AMBPP02760 352 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 TTRP02766 147 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 FBP1P09467 338 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 CECR9P0C854 216 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 OR12D1P0DN82 309 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 T-ENOLP0DO92 83 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 IFI30P13284 250 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 CTLA4P16410 223 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 S100A1P23297 94 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 DIO3P55073 304 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 MP68P56378 58 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 C1QTNF8P60827 252 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 RHOBP62745 196 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 JOSD1Q15040 202 aaPredicted RBP2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 SURF2Q15527 256 aaPredicted RBP2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 SSX1Q16384 188 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 ZNF404Q494X3 552 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 FAM201AQ5SY85 155 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 LCN8Q6JVE9 175 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 ZNF773Q6PK81 442 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 SMARCD3Q6STE5 483 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 RNF165Q6ZSG1 346 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 FAM19A3Q7Z5A8 133 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 CLVS1Q8IUQ0 354 aaPredicted RBP2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 DRAM1Q8N682 238 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 ZNF439Q8NDP4 499 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 OR2K2Q8NGT1 345 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 RNASE11Q8TAA1 199 aaKnown RBP2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 C18orf15Q96N68 181 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 GPER1Q99527 375 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 SAMD10Q9BYL1 202 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 SLC17A9Q9BYT1 436 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 CISHQ9NSE2 258 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 PYCARDQ9ULZ3 195 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 NEUROG3Q9Y4Z2 214 aa2.94□□□□□ -1.94
RNU4-60P-201ENST00000517239 ASTN1O14525 1302 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 MIA2Q96PC5 1412 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 MYO5BQ9ULV0 1848 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 ZNF850A8MQ14 1090 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 UPK1AO00322 258 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 HMGB3O15347 200 aaKnown RBP2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 GYG2O15488 501 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 NDUFA2O43678 99 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 ANGPTL7O43827 346 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 COX7A2P2O60397 106 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 GPR75O95800 540 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 IGLV2-11P01706 119 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 IGHV3-23P01764 117 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 HLA-DPB1P04440 258 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 PFN1P07737 140 aaKnown RBP2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 SOD3P08294 240 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 OR4Q2P0C623 313 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 IL3RAP26951 378 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 SRP9P49458 86 aaKnown RBP2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 CTBP2P56545 445 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 DEFA1P59665 94 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 TPI1P60174 286 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 AP1S1P61966 158 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 ESRRGP62508 458 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 RPS24P62847 133 aaKnown RBP2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 TMEM267Q0VDI3 215 aaPredicted RBP2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 MPPED2Q15777 294 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 RSPO1Q2MKA7 263 aaPredicted RBP2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 TIMM50Q3ZCQ8 353 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 ABCA11PQ4W5N1 156 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 ZNF585BQ52M93 769 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 CLLU1OSQ5K130 101 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 SAMD13Q5VXD3 122 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 SLC16A13Q7RTY0 426 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 OOSP2Q86WS3 158 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 PRIMA1Q86XR5 153 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 DOLPP1Q86YN1 238 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 Q8N3U1 123 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 SLC25A45Q8N413 288 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 ZNF561Q8N587 486 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 DEFB125Q8N687 156 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 ST6GALNAC3Q8NDV1 305 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 OR52L1Q8NGH7 329 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 OR1J4Q8NGS1 313 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 OR52P1PQ8NH57 321 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 OR5K1Q8NHB7 308 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 JOSD2Q8TAC2 188 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 C7orf33Q8WU49 177 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 SKA2Q8WVK7 121 aaPredicted RBP2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 PTX4Q96A99 478 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 SLC25A44Q96H78 314 aaPredicted RBP2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 ATOH8Q96SQ7 321 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 NRIP2Q9BQI9 281 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 LRRC61Q9BV99 259 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 PARP12Q9H0J9 701 aaKnown RBP2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 RNASE7Q9H1E1 156 aaKnown RBP2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 HES4Q9HCC6 221 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 UBQLN4Q9NRR5 601 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 TMEM216Q9P0N5 145 aa2.93□□□□□ -1.94
RNU4-60P-201ENST00000517239 RSL24D1Q9UHA3 163 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms