RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 A0A087WUU8 490 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 IGHV1-58A0A0C4DH39 117 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 LOC389332A0A1B0GUA5 103 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 SLC5A10A0PJK1 596 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 UPK1AO00322 258 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CPLX1O14810 134 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 FADS1O60427 444 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CLDN11O75508 207 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 EEDO75530 441 aaKnown RBP-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 GGPS1O95749 300 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 RALAP11233 206 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 PORP16435 677 aaPredicted RBP-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 BGNP21810 368 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CRHBPP24387 322 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 MYL9P24844 172 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CXCR1P25024 350 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 PSMA2P25787 234 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 ALDH3A1P30838 453 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 KIF5BP33176 963 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 GGT2P36268 569 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 SSR4P51571 173 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 PLA2G16P53816 162 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 MLF1P58340 268 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 HIST1H4AP62805 103 aaKnown RBP-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 HTD2P86397 168 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 KLRB1Q12918 225 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CAMK2DQ13557 499 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 SNX1Q13596 522 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CARTPTQ16568 116 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 MRPL51Q4U2R6 128 aaKnown RBP-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 SPATA45Q537H7 98 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 FAM74A1Q5RGS3 127 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 Q6ZS49 121 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 NIPA1Q7RTP0 329 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 PRNTQ86SH4 94 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 TMEM150AQ86TG1 271 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 OOSP2Q86WS3 158 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 LINC00311Q8N616 119 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 NHLRC2Q8NBF2 726 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 INO80EQ8NBZ0 244 aaPredicted RBP-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 LEMD2Q8NC56 503 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 STXBP6Q8NFX7 210 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 OR2M3Q8NG83 312 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 OR4P4Q8NGL7 312 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 C4orf3Q8WVX3 66 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 PRR15LQ9BU68 103 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 ACAT2Q9BWD1 397 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 TMEM117Q9H0C3 514 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 ARV1Q9H2C2 271 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 MIXL1Q9H2W2 232 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 HEATR1Q9H583 2144 aaKnown RBP-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 MRPS30Q9NP92 439 aaKnown RBP-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 BLOC1S4Q9NUP1 217 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 TIMM9Q9Y5J7 89 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 ZNF706Q9Y5V0 76 aaPredicted RBP-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 SNX8Q9Y5X2 465 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CARMIL1Q5VZK9 1371 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 NOS1P29475 1434 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 FRYQ5TBA9 3013 aa-1.74□□□□□ -2.69
RNU6-1238P-201ENST00000517215 REV3LO60673 3130 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CCDC160A6NGH7 325 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 C9J4A7 227 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 LGALS8O00214 317 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 SIRPB1O00241 398 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CLDN5O00501 218 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 SDHDO14521 159 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 P4HA2O15460 535 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CCL16O15467 120 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CLDN3O15551 220 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 PRKAB2O43741 272 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 ALOX12BO75342 701 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 MYO1DO94832 1006 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 OR2F2O95006 317 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 DIRAS1O95057 198 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 IGHV1-69P01742 117 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 PMP2P02689 132 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 HSP90AA1P07900 732 aaKnown RBP-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 HSPA5P11021 654 aaKnown RBP-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 PRKACAP17612 351 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 PSMB8P28062 276 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 S100A2P29034 98 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 GNA11P29992 359 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 PFN2P35080 140 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 OPRM1P35372 400 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CASP2P42575 452 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CRATP43155 626 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 TSPEAR-AS2P59090 65 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 FXYD4P59646 89 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 ACTBP60709 375 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 ACTG1P63261 375 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 SSX1Q16384 188 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 GOLGA7BQ2TAP0 167 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 DEFB112Q30KQ8 113 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 NADK2Q4G0N4 442 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 TMEM41BQ5BJD5 291 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 RILPL1Q5EBL4 403 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 C1orf137Q5JT78 98 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 GLT8D1Q68CQ7 371 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 TRAT1Q6PIZ9 186 aa-1.75□□□□□ -2.69
RNU6-1238P-201ENST00000517215 ACOT1Q86TX2 421 aa-1.75□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms