RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 C2orf74A8MZ97 194 aa0.13□□□□□ -2.39
RNU6-1088P-201ENST00000516850 SEC14L6B5MCN3 397 aa0.13□□□□□ -2.39
RNU6-1088P-201ENST00000516850 CA2P00918 260 aa0.13□□□□□ -2.39
RNU6-1088P-201ENST00000516850 HOXC5Q00444 222 aa0.13□□□□□ -2.39
RNU6-1088P-201ENST00000516850 IL18Q14116 193 aa0.13□□□□□ -2.39
RNU6-1088P-201ENST00000516850 ATP6V1FQ16864 119 aa0.13□□□□□ -2.39
RNU6-1088P-201ENST00000516850 CEACAM16Q2WEN9 425 aa0.13□□□□□ -2.39
RNU6-1088P-201ENST00000516850 DUPD1Q68J44 220 aa0.13□□□□□ -2.39
RNU6-1088P-201ENST00000516850 ULK3Q6PHR2 472 aa0.13□□□□□ -2.39
RNU6-1088P-201ENST00000516850 TRIML2Q8N7C3 387 aa0.13□□□□□ -2.39
RNU6-1088P-201ENST00000516850 OR10A6Q8NH74 314 aa0.13□□□□□ -2.39
RNU6-1088P-201ENST00000516850 NAP1L5Q96NT1 182 aaPredicted RBP0.13□□□□□ -2.39
RNU6-1088P-201ENST00000516850 MND1Q9BWT6 205 aa0.13□□□□□ -2.39
RNU6-1088P-201ENST00000516850 LZTFL1Q9NQ48 299 aa0.13□□□□□ -2.39
RNU6-1088P-201ENST00000516850 C8orf4Q9NR00 106 aa0.13□□□□□ -2.39
RNU6-1088P-201ENST00000516850 RAB20Q9NX57 234 aa0.13□□□□□ -2.39
RNU6-1088P-201ENST00000516850 POMPQ9Y244 141 aa0.13□□□□□ -2.39
RNU6-1088P-201ENST00000516850 TNIKQ9UKE5 1360 aa0.13□□□□□ -2.39
RNU6-1088P-201ENST00000516850 POLEQ07864 2286 aa0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 SCN9AQ15858 1988 aa0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 IGHV3-73A0A0B4J1V6 119 aa0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 H3BPC8 53 aa0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 ZNF593O00488 134 aaPredicted RBP0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 P2RY2P41231 377 aa0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 RPL14P50914 215 aaKnown RBP0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 NNATQ16517 81 aa0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 SLC35D2Q76EJ3 337 aa0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 CA13Q8N1Q1 262 aa0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 SLC35G5Q96KT7 338 aa0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 MGLLQ99685 303 aa0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 NXF2Q9GZY0 626 aaKnown RBP0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 NMRK1Q9NWW6 199 aa0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 STK38LQ9Y2H1 464 aa0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 C22orf24Q9Y442 160 aa0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 FREM1Q5H8C1 2179 aa0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 PLCH2O75038 1416 aa0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 ZFC3H1O60293 1989 aaKnown RBP0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 PTPRBP23467 1997 aa0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 ZNF532Q9HCE3 1301 aa0.12□□□□□ -2.39
RNU6-1088P-201ENST00000516850 NUMA1Q14980 2115 aa0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 USP24Q9UPU5 2620 aa0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 HEATR5BQ9P2D3 2071 aa0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 MEIKINA0A087WXM9 373 aa0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 TRAV25A0A0B4J276 109 aa0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 C11orf86A6NJI1 115 aa0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 K7EQS6 105 aa0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 WRBO00258 174 aa0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 UBFD1O14562 309 aaKnown RBP0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 SLC2A1P11166 492 aa0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 ZNF3P17036 446 aa0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 HSPA13P48723 471 aa0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 PSMD4P55036 377 aaKnown RBP0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 PLTPP55058 493 aa0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 LCN2P80188 198 aa0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 SLC38A11Q08AI6 406 aa0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 OLIG3Q7RTU3 272 aa0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 LRRC28Q86X40 367 aaPredicted RBP0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 VAT1Q99536 393 aa0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 ZNF471Q9BX82 626 aaPredicted RBP0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 POTEKPQ9BYX7 375 aa0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 MED9Q9NWA0 146 aa0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 ZMAT5Q9UDW3 170 aaKnown RBP0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 KLK5Q9Y337 293 aaPredicted RBP0.11□□□□□ -2.39
RNU6-1088P-201ENST00000516850 IGKV1-12A0A0C4DH73 117 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 A0A1B0GXF2 115 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 ANKRD20A5PA0PJZ0 165 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 TMEM235A6NFC5 223 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 GOLGA8TH3BQL2 631 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 GNRH2O43555 120 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 MRPS14O60783 128 aaKnown RBP0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 DNAJB6O75190 326 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 LY6HO94772 140 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 IGKV1D-12P01611 117 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 SLC25A16P16260 332 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 CSKP41240 450 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 RPS5P46782 204 aaKnown RBP0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 RHOAP61586 193 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 PSMC5P62195 406 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 MRPL21Q7Z2W9 205 aaKnown RBP0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 ASCC1Q8N9N2 400 aaKnown RBP0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 LFNGQ8NES3 379 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 OR11H1Q8NG94 326 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 NELFBQ8WX92 580 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 Q96M85 177 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 FAAP24Q9BTP7 215 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 ZNF426Q9BUY5 554 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 TM6SF2Q9BZW4 377 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 IL22Q9GZX6 179 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 AHSPQ9NZD4 102 aa0.1□□□□□ -2.39
RNU6-1088P-201ENST00000516850 TECTAO75443 2155 aa0.09□□□□□ -2.39
RNU6-1088P-201ENST00000516850 DIDO1Q9BTC0 2240 aaKnown RBP0.09□□□□□ -2.39
RNU6-1088P-201ENST00000516850 TRAV41A0A0B4J266 112 aa0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 CTAGE15A4D2H0 777 aa0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 NCF1BA6NI72 391 aaPredicted RBP0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 NCF1CA8MVU1 366 aaPredicted RBP0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 LTAP01374 205 aa0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 LIPCP11150 499 aa0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 IVDP26440 423 aa0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 PYCR1P32322 319 aa0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 ARR3P36575 388 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms