RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 HTR2CP28335 458 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 MAP2K4P45985 399 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 PROK1P58294 105 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 RPS25P62851 125 aaKnown RBP10.31□□□□□ -0.76
CLCN3-210ENST00000515420 FAM189A2Q15884 450 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 TMEM30BQ3MIR4 351 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 RAB12Q6IQ22 244 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 GAPTQ8N292 157 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 TMEM104Q8NE00 496 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 OR52M1Q8NGK5 317 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 OR6M1Q8NGM8 313 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 KCNG3Q8TAE7 436 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 MRGPRDQ8TDS7 321 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 NEK7Q8TDX7 302 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 TMEM203Q969S6 136 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 SELENOIQ9C0D9 397 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 NPFFR1Q9GZQ6 430 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 MMP28Q9H239 520 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 BANF2Q9H503 90 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 ZNF696Q9H7X3 374 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 ZNF286AQ9HBT8 521 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 AMMECR1Q9Y4X0 333 aaPredicted RBP10.31□□□□□ -0.76
CLCN3-210ENST00000515420 A6NDX4 124 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 BUB1B-PAK6H3BSN5 160 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 AIPO00170 330 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 PDCD6O75340 191 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 BPNT1O95861 308 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 VSIG8P0DPA2 414 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 GALP22466 123 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 PAX6P26367 422 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 BRS3P32247 399 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 KIR2DS4P43632 304 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 RPS27AP62979 156 aaKnown RBP10.3□□□□□ -0.76
CLCN3-210ENST00000515420 EMX1Q04741 257 aaPredicted RBP10.3□□□□□ -0.76
CLCN3-210ENST00000515420 LY6EQ16553 131 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 Q3ZCU0 254 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 CCDC144NLQ6NUI1 221 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 TRAT1Q6PIZ9 186 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 CD200R1LQ6Q8B3 271 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 BAIAP2L2Q6UXY1 529 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 ZNF554Q86TJ5 538 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 OR4C13Q8NGP0 309 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 FCGR1BQ92637 280 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 CITED1Q99966 193 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 TMEM59Q9BXS4 323 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 NDUFB11Q9NX14 153 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 RRP15Q9Y3B9 282 aaKnown RBP10.3□□□□□ -0.76
CLCN3-210ENST00000515420 HILPDAQ9Y5L2 63 aa10.3□□□□□ -0.76
CLCN3-210ENST00000515420 LY6LH3BQJ8 138 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 C15orf65H3BRN8 121 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 J3QR06 171 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 F2RL2O00254 374 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 SLC17A2O00624 439 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 MT-ND4P03905 459 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 NFYBP25208 207 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 SSTR5P35346 364 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 PSMD7P51665 324 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 FABP5Q01469 135 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 SSX1Q16384 188 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 PRR31Q5SQ13 230 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 C6orf183Q5T699 404 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 UBE2UQ5VVX9 321 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 SIGIRRQ6IA17 410 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 C16orf82Q7Z2V1 217 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 OR2W3Q7Z3T1 314 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 C8orf31Q8N9H6 132 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 TM2D1Q9BX74 207 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 ETAA1Q9NY74 926 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 PSG11Q9UQ72 335 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 PEX16Q9Y5Y5 336 aa10.29□□□□□ -0.76
CLCN3-210ENST00000515420 TRAV1-2A0A0B4J238 106 aa10.28□□□□□ -0.76
CLCN3-210ENST00000515420 FAM172BPA6NC97 362 aa10.28□□□□□ -0.76
CLCN3-210ENST00000515420 TMEM14DPA8MWL7 114 aa10.28□□□□□ -0.76
CLCN3-210ENST00000515420 CHST1O43916 411 aa10.28□□□□□ -0.76
CLCN3-210ENST00000515420 MPIG6BO95866 241 aa10.28□□□□□ -0.76
CLCN3-210ENST00000515420 QRFPP83859 136 aa10.28□□□□□ -0.76
CLCN3-210ENST00000515420 PLA1AQ53H76 456 aa10.28□□□□□ -0.76
CLCN3-210ENST00000515420 TPTE2P1Q5T6R2 138 aa10.28□□□□□ -0.76
CLCN3-210ENST00000515420 BRICD5Q6PL45 260 aa10.28□□□□□ -0.76
CLCN3-210ENST00000515420 CCBE1Q6UXH8 406 aaPredicted RBP10.28□□□□□ -0.76
CLCN3-210ENST00000515420 Q8N2B8 174 aa10.28□□□□□ -0.76
CLCN3-210ENST00000515420 LINC00311Q8N616 119 aa10.28□□□□□ -0.76
CLCN3-210ENST00000515420 OR2T6Q8NHC8 308 aa10.28□□□□□ -0.76
CLCN3-210ENST00000515420 RFESDQ8TAC1 157 aa10.28□□□□□ -0.76
CLCN3-210ENST00000515420 FAM46BQ96A09 425 aa10.28□□□□□ -0.76
CLCN3-210ENST00000515420 NEDD4LQ96PU5 975 aa10.28□□□□□ -0.76
CLCN3-210ENST00000515420 MBNL3Q9NUK0 354 aaKnown RBP10.28□□□□□ -0.76
CLCN3-210ENST00000515420 LRRC42Q9Y546 428 aa10.28□□□□□ -0.76
CLCN3-210ENST00000515420 TRDV1A0A1B0GX56 115 aa10.27□□□□□ -0.77
CLCN3-210ENST00000515420 CCRL2O00421 344 aa10.27□□□□□ -0.77
CLCN3-210ENST00000515420 SPINT2O43291 252 aa10.27□□□□□ -0.77
CLCN3-210ENST00000515420 ARSBP15848 533 aa10.27□□□□□ -0.77
CLCN3-210ENST00000515420 CALRP27797 417 aaKnown RBP10.27□□□□□ -0.77
CLCN3-210ENST00000515420 CHATP28329 748 aa10.27□□□□□ -0.77
CLCN3-210ENST00000515420 MNDAP41218 407 aa10.27□□□□□ -0.77
CLCN3-210ENST00000515420 RAB13P51153 203 aa10.27□□□□□ -0.77
CLCN3-210ENST00000515420 EFNB2P52799 333 aa10.27□□□□□ -0.77
CLCN3-210ENST00000515420 LOXL3P58215 753 aa10.27□□□□□ -0.77
CLCN3-210ENST00000515420 UNC119Q13432 240 aa10.27□□□□□ -0.77
CLCN3-210ENST00000515420 MADCAM1Q13477 382 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms