RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ZNF596Q8TC21 504 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 UFD1Q92890 307 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 NPFFR1Q9GZQ6 430 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 VCX3BQ9H321 246 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 ETAA1Q9NY74 926 aa9.22□□□□□ -0.93
VCAN-212ENST00000515397 AK6Q9Y3D8 172 aaKnown RBP9.22□□□□□ -0.93
VCAN-212ENST00000515397 FAM90A22PA8MWA6 464 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 MCRIP1C9JLW8 97 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 NPIPB11E5RHQ5 1161 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 C15orf65H3BRN8 121 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 TSPAN15O95858 294 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 RCC1P18754 421 aaPredicted RBP9.21□□□□□ -0.94
VCAN-212ENST00000515397 REG1BP48304 166 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 HNF4GQ14541 408 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 P2RY14Q15391 338 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 MPV17LQ2QL34 196 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 NKAPLQ5M9Q1 402 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 SYT6Q5T7P8 510 aaPredicted RBP9.21□□□□□ -0.94
VCAN-212ENST00000515397 ZNF497Q6ZNH5 498 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 OR9G1Q8NH87 305 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 OR1L1Q8NH94 360 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 CAPSLQ8WWF8 208 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 Q96M66 194 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 GFI1Q99684 422 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 MGLLQ99685 303 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 MMP28Q9H239 520 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 IFT22Q9H7X7 185 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 RAB18Q9NP72 206 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 PCDHB16Q9NRJ7 776 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 TRAPPC2LQ9UL33 140 aa9.21□□□□□ -0.94
VCAN-212ENST00000515397 A0A087X0M5 115 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 IGHV3-72A0A0B4J1Y9 119 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 A0A1B0GX30 115 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 AIPO00170 330 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 SDCBPO00560 298 aaPredicted RBP9.2□□□□□ -0.94
VCAN-212ENST00000515397 SLC31A2O15432 143 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 SC5DO75845 299 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 UCHL1P09936 223 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 VSIG8P0DPA2 414 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 GZMHP20718 246 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 HTR2CP28335 458 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 KCNJ3P48549 501 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 DYNLT3P51808 116 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 CLDN12P56749 244 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 FABP5Q01469 135 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 TPBGQ13641 420 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 ARSJQ5FYB0 599 aaPredicted RBP9.2□□□□□ -0.94
VCAN-212ENST00000515397 GLT8D1Q68CQ7 371 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 PRSS48Q7RTY5 328 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 LINC00596Q86U02 117 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 CDH26Q8IXH8 852 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 DRAM1Q8N682 238 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 OR10V1Q8NGI7 309 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 RPEQ96AT9 228 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 UQCC2Q9BRT2 126 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 NICN1Q9BSH3 213 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 FAAP24Q9BTP7 215 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 PRSS22Q9GZN4 317 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 NCOR1P1Q9H4R4 102 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 LINC00574Q9H8X3 128 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 SERTAD4Q9NUC0 356 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 RCC2Q9P258 522 aaKnown RBP9.2□□□□□ -0.94
VCAN-212ENST00000515397 PITPNC1Q9UKF7 332 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 MEGF8Q7Z7M0 2845 aa9.2□□□□□ -0.94
VCAN-212ENST00000515397 NOTCH3Q9UM47 2321 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 C12orf77C9JDV5 145 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 TIMM23O14925 209 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 CD28P10747 220 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 CPEP16870 476 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 FUT3P21217 361 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 BRS3P32247 399 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 HSPA13P48723 471 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 PAX5Q02548 391 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 UNC119Q13432 240 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 HERPUD1Q15011 391 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 SSX1Q16384 188 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 NSUN5P1Q3KNT7 163 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 ABCA11PQ4W5N1 156 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 C1orf100Q5SVJ3 147 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 LIAT1Q6ZQX7 453 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 Q6ZTK2 550 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 C6orf201Q7Z4U5 140 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 NKAIN3Q8N8D7 197 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 OR10X1Q8NGY0 326 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 OR56B4Q8NH76 319 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 TOMM40LQ969M1 308 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 MRPS24Q96EL2 167 aaKnown RBP9.19□□□□□ -0.94
VCAN-212ENST00000515397 SULT4A1Q9BR01 284 aa9.19□□□□□ -0.94
VCAN-212ENST00000515397 A0A0A6YYD4 124 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 M0QZ24 198 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 WIPF1O43516 503 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 PDCD6O75340 191 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 HBZP02008 142 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 LPLP06858 475 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 SNRNP70P08621 437 aaKnown RBP9.18□□□□□ -0.94
VCAN-212ENST00000515397 CALRP27797 417 aaKnown RBP9.18□□□□□ -0.94
VCAN-212ENST00000515397 CEACAM3P40198 252 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 MNDAP41218 407 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 ZNF134P52741 427 aa9.18□□□□□ -0.94
VCAN-212ENST00000515397 LOXL3P58215 753 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms