RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 RNF7Q9UBF6 113 aa10.76□□□□□ -0.69
PVT1-203ENST00000513868 OPN4Q9UHM6 478 aa10.76□□□□□ -0.69
PVT1-203ENST00000513868 TRAPPC2LQ9UL33 140 aa10.76□□□□□ -0.69
PVT1-203ENST00000513868 PCDHB10Q9UN67 800 aa10.76□□□□□ -0.69
PVT1-203ENST00000513868 C14orf166Q9Y224 244 aaKnown RBP10.76□□□□□ -0.69
PVT1-203ENST00000513868 BOLA1Q9Y3E2 137 aa10.76□□□□□ -0.69
PVT1-203ENST00000513868 RNF115Q9Y4L5 304 aa10.76□□□□□ -0.69
PVT1-203ENST00000513868 DCHS2Q6V1P9 2916 aa10.75□□□□□ -0.69
PVT1-203ENST00000513868 TMEM30CPA0ZSE6 113 aa10.75□□□□□ -0.69
PVT1-203ENST00000513868 FAM172BPA6NC97 362 aa10.75□□□□□ -0.69
PVT1-203ENST00000513868 CRYM-AS1A6NIL9 109 aa10.75□□□□□ -0.69
PVT1-203ENST00000513868 VSTM5A8MXK1 200 aa10.75□□□□□ -0.69
PVT1-203ENST00000513868 CYB5R3P00387 301 aaPredicted RBP10.75□□□□□ -0.69
PVT1-203ENST00000513868 TK1P04183 234 aa10.75□□□□□ -0.69
PVT1-203ENST00000513868 CD80P33681 288 aa10.75□□□□□ -0.69
PVT1-203ENST00000513868 RAP2BP61225 183 aa10.75□□□□□ -0.69
PVT1-203ENST00000513868 SRSF4Q08170 494 aaKnown RBP10.75□□□□□ -0.69
PVT1-203ENST00000513868 HMGN3Q15651 99 aa10.75□□□□□ -0.69
PVT1-203ENST00000513868 ANKRD55Q3KP44 614 aa10.75□□□□□ -0.69
PVT1-203ENST00000513868 LDLRAD3Q86YD5 345 aa10.75□□□□□ -0.69
PVT1-203ENST00000513868 OR5M8Q8NGP6 311 aa10.75□□□□□ -0.69
PVT1-203ENST00000513868 ANGPTL6Q8NI99 470 aa10.75□□□□□ -0.69
PVT1-203ENST00000513868 ITLN2Q8WWU7 325 aaPredicted RBP10.75□□□□□ -0.69
PVT1-203ENST00000513868 KIRREL1Q96J84 757 aa10.75□□□□□ -0.69
PVT1-203ENST00000513868 TMEM204Q9BSN7 226 aa10.75□□□□□ -0.69
PVT1-203ENST00000513868 PLSCR3Q9NRY6 295 aa10.75□□□□□ -0.69
PVT1-203ENST00000513868 PRR13Q9NZ81 148 aa10.75□□□□□ -0.69
PVT1-203ENST00000513868 KIF25Q9UIL4 384 aa10.75□□□□□ -0.69
PVT1-203ENST00000513868 PPP1R3CQ9UQK1 317 aa10.75□□□□□ -0.69
PVT1-203ENST00000513868 A0A0B4J2A0 478 aa10.74□□□□□ -0.69
PVT1-203ENST00000513868 IGKV1D-13A0A0B4J2D9 117 aa10.74□□□□□ -0.69
PVT1-203ENST00000513868 NPIPB11E5RHQ5 1161 aa10.74□□□□□ -0.69
PVT1-203ENST00000513868 ZG16O60844 167 aa10.74□□□□□ -0.69
PVT1-203ENST00000513868 IGKV1-13P0DP09 117 aa10.74□□□□□ -0.69
PVT1-203ENST00000513868 DNASE1P24855 282 aa10.74□□□□□ -0.69
PVT1-203ENST00000513868 GNRHRP30968 328 aa10.74□□□□□ -0.69
PVT1-203ENST00000513868 PIGPP57054 158 aa10.74□□□□□ -0.69
PVT1-203ENST00000513868 TESK1Q15569 626 aa10.74□□□□□ -0.69
PVT1-203ENST00000513868 SLC9A3R2Q15599 337 aa10.74□□□□□ -0.69
PVT1-203ENST00000513868 FAM209AQ5JX71 171 aa10.74□□□□□ -0.69
PVT1-203ENST00000513868 H1FOOQ8IZA3 346 aaPredicted RBP10.74□□□□□ -0.69
PVT1-203ENST00000513868 SLC38A6Q8IZM9 456 aa10.74□□□□□ -0.69
PVT1-203ENST00000513868 PIK3IP1Q96FE7 263 aa10.74□□□□□ -0.69
PVT1-203ENST00000513868 TAF9BQ9HBM6 251 aa10.74□□□□□ -0.69
PVT1-203ENST00000513868 CISD1Q9NZ45 108 aaKnown RBP10.74□□□□□ -0.69
PVT1-203ENST00000513868 DNAJB11Q9UBS4 358 aa10.74□□□□□ -0.69
PVT1-203ENST00000513868 SHPKQ9UHJ6 478 aa10.74□□□□□ -0.69
PVT1-203ENST00000513868 MGAT4AQ9UM21 535 aa10.74□□□□□ -0.69
PVT1-203ENST00000513868 CCSO14618 274 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 TNFRSF1AP19438 455 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 GABRA2P47869 451 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 GLIPR1P48060 266 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 HERV-K104P61576 105 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 IFITM2Q01629 132 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 SWI5Q1ZZU3 235 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 KCTD9Q7L273 389 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 C9orf62Q8N4C0 152 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 ZNF808Q8N4W9 903 aaPredicted RBP10.73□□□□□ -0.69
PVT1-203ENST00000513868 ASCC1Q8N9N2 400 aaKnown RBP10.73□□□□□ -0.69
PVT1-203ENST00000513868 OR11L1Q8NGX0 322 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 SNX22Q96L94 193 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 CLEC4MQ9H2X3 399 aaPredicted RBP10.73□□□□□ -0.69
PVT1-203ENST00000513868 SLC2A9Q9NRM0 540 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 OR1A1Q9P1Q5 309 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 MAB21L2Q9Y586 359 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 ZFYVE26Q68DK2 2539 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 B9A039 149 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 K7N7A8 449 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 CLDN14O95500 239 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 DIRAS3O95661 229 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 HEXAP06865 529 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 AGAP20933 346 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 ZNF672Q499Z4 452 aaPredicted RBP10.73□□□□□ -0.69
PVT1-203ENST00000513868 PHLDA2Q53GA4 152 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 KRBOX4Q5JUW0 171 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 TEX36Q5VZQ5 186 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 STUMQ69YW2 141 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 LPCAT3Q6P1A2 487 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 C11orf88Q6PI97 169 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 TPRX1Q8N7U7 411 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 ZNRF1Q8ND25 227 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 OR10J5Q8NHC4 309 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 GRPEL2Q8TAA5 225 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 UBALD1Q8TB05 177 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 IL1F10Q8WWZ1 152 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 ASB13Q8WXK3 278 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 OR2W1Q9Y3N9 320 aa10.73□□□□□ -0.69
PVT1-203ENST00000513868 FLNCQ14315 2725 aa10.72□□□□□ -0.69
PVT1-203ENST00000513868 C12orf77C9JDV5 145 aa10.72□□□□□ -0.69
PVT1-203ENST00000513868 IFNA2P01563 188 aa10.72□□□□□ -0.69
PVT1-203ENST00000513868 CD8AP01732 235 aa10.72□□□□□ -0.69
PVT1-203ENST00000513868 SGPP2Q8IWX5 399 aa10.72□□□□□ -0.69
PVT1-203ENST00000513868 PRR18Q8N4B5 295 aa10.72□□□□□ -0.69
PVT1-203ENST00000513868 ZBTB8BQ8NAP8 495 aaPredicted RBP10.72□□□□□ -0.69
PVT1-203ENST00000513868 RTN4IP1Q8WWV3 396 aaPredicted RBP10.72□□□□□ -0.69
PVT1-203ENST00000513868 GALNT14Q96FL9 552 aa10.72□□□□□ -0.69
PVT1-203ENST00000513868 SDSLQ96GA7 329 aa10.72□□□□□ -0.69
PVT1-203ENST00000513868 MS4A5Q9H3V2 200 aa10.72□□□□□ -0.69
PVT1-203ENST00000513868 NAA60Q9H7X0 242 aa10.72□□□□□ -0.69
PVT1-203ENST00000513868 SAP30LQ9HAJ7 183 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms