RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 IFNA1P01562 189 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 CD74P04233 296 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 UBBP0CG47 229 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 C8orf88P0DMB2 117 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 ESDP10768 282 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 CELP19835 753 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 PMCHP20382 165 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 PSMA1P25786 263 aaKnown RBP3.31□□□□□ -1.88
NIPBL-207ENST00000513819 CMPK1P30085 196 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 HTR1FP30939 366 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 CDKN2BP42772 138 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 GABRA2P47869 451 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 RPL29P47914 159 aaKnown RBP3.31□□□□□ -1.88
NIPBL-207ENST00000513819 DNASE1L1P49184 302 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 PRLHRP49683 370 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 AKR1C2P52895 323 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 AQP5P55064 265 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 PLP1P60201 277 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 LMO4P61968 165 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 SELENOWP63302 87 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 CXCL6P80162 114 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 RUNX1Q01196 453 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 ST3GAL3Q11203 375 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 ST3GAL4Q11206 333 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 GNMTQ14749 295 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 RHEBQ15382 184 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 GABRA6Q16445 453 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 Q1RN00 199 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 TTLL9Q3SXZ7 439 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 TMEM78Q5T7P6 136 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 C22orf42Q6IC83 251 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 KCNIP4Q6PIL6 250 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 WDR74Q6RFH5 385 aaPredicted RBP3.31□□□□□ -1.88
NIPBL-207ENST00000513819 ALKAL2Q6UX46 152 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 ZNF621Q6ZSS3 439 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 C6orf120Q7Z4R8 191 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 CDC20BQ86Y33 519 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 DEFB107AQ8IZN7 70 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 SPICQ8N5J4 248 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 ZNF676Q8N7Q3 588 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 CHST4Q8NCG5 386 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 OR7G2Q8NG99 324 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 OR4K5Q8NGD3 323 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 OR1L4Q8NGR5 311 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 OR1N2Q8NGR9 330 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 OR2Y1Q8NGV0 311 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 LYPD6BQ8NI32 183 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 CANT1Q8WVQ1 401 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 GTSF1Q8WW33 167 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 ARL11Q969Q4 196 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 PTX4Q96A99 478 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 APOBEC3DQ96AK3 386 aaPredicted RBP3.31□□□□□ -1.88
NIPBL-207ENST00000513819 COPS8Q99627 209 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 HIST1H2BLQ99880 126 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 CDCA4Q9BXL8 241 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 DUSP16Q9BY84 665 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 SELENOIQ9C0D9 397 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 MED28Q9H204 178 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 SYT4Q9H2B2 425 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 PPDPFQ9H3Y8 114 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 GPATCH2LQ9NWQ4 482 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 EHFQ9NZC4 300 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 OR5AC2Q9NZP5 309 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 NAT8Q9UHE5 227 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 HSPB8Q9UJY1 196 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 ERG28Q9UKR5 140 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 C14orf166Q9Y224 244 aaKnown RBP3.31□□□□□ -1.88
NIPBL-207ENST00000513819 SIGLEC9Q9Y336 463 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 AK6Q9Y3D8 172 aaKnown RBP3.31□□□□□ -1.88
NIPBL-207ENST00000513819 TIMM10BQ9Y5J6 103 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 OR51B2Q9Y5P1 312 aa3.31□□□□□ -1.88
NIPBL-207ENST00000513819 NALCNQ8IZF0 1738 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 IFT172Q9UG01 1749 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 GCC2Q8IWJ2 1684 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 QRICH2Q9H0J4 1663 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 IGKV3D-20A0A0C4DH25 116 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 OR5B21A6NL26 309 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 IFITM5A6NNB3 132 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 DHRS7CA6NNS2 312 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 ZNF705EA8MWA4 302 aaPredicted RBP3.3□□□□□ -1.88
NIPBL-207ENST00000513819 INMT-MINDY4F8WBC2 141 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 G3V3Q6 166 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 BCL2L11O43521 198 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 DUSP14O95147 198 aaKnown RBP3.3□□□□□ -1.88
NIPBL-207ENST00000513819 SIX6O95475 246 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 OPN1SWP03999 348 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 TYMSP04818 313 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 SOD3P08294 240 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 H2AFZP0C0S5 128 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 OR5G3P0C626 314 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 SULT1A3P0DMM9 295 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 SULT1A4P0DMN0 295 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 ZNF17P17021 662 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 ZNF19P17023 458 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 ALOX5APP20292 161 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 IGHV1-2P23083 117 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 GPR6P46095 362 aaPredicted RBP3.3□□□□□ -1.88
NIPBL-207ENST00000513819 TAF6P49848 677 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 CTBP2P56545 445 aa3.3□□□□□ -1.88
NIPBL-207ENST00000513819 NDUFA6P56556 154 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms