RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 C4orf46Q504U0 113 aa8.28□□□□□ -1.08
TPM3-221ENST00000513769 C6orf183Q5T699 404 aa8.28□□□□□ -1.08
TPM3-221ENST00000513769 KCTD9Q7L273 389 aa8.28□□□□□ -1.08
TPM3-221ENST00000513769 MOGAT3Q86VF5 341 aa8.28□□□□□ -1.08
TPM3-221ENST00000513769 FAM185AQ8N0U4 392 aa8.28□□□□□ -1.08
TPM3-221ENST00000513769 ANGPTL6Q8NI99 470 aa8.28□□□□□ -1.08
TPM3-221ENST00000513769 NEU4Q8WWR8 484 aaPredicted RBP8.28□□□□□ -1.08
TPM3-221ENST00000513769 ST6GAL2Q96JF0 529 aa8.28□□□□□ -1.08
TPM3-221ENST00000513769 OR2A7Q96R45 310 aa8.28□□□□□ -1.08
TPM3-221ENST00000513769 ZNF2Q9BSG1 426 aaPredicted RBP8.28□□□□□ -1.08
TPM3-221ENST00000513769 RAB1BQ9H0U4 201 aa8.28□□□□□ -1.08
TPM3-221ENST00000513769 CLEC4MQ9H2X3 399 aaPredicted RBP8.28□□□□□ -1.08
TPM3-221ENST00000513769 RANBP3Q9H6Z4 567 aaPredicted RBP8.28□□□□□ -1.08
TPM3-221ENST00000513769 ZNF665Q9H7R5 613 aa8.28□□□□□ -1.08
TPM3-221ENST00000513769 DLL4Q9NR61 685 aa8.28□□□□□ -1.08
TPM3-221ENST00000513769 CBLN4Q9NTU7 201 aa8.28□□□□□ -1.08
TPM3-221ENST00000513769 TRAPPC2LQ9UL33 140 aa8.28□□□□□ -1.08
TPM3-221ENST00000513769 C14orf166Q9Y224 244 aaKnown RBP8.28□□□□□ -1.08
TPM3-221ENST00000513769 KLF2Q9Y5W3 355 aaPredicted RBP8.28□□□□□ -1.08
TPM3-221ENST00000513769 NBASA2RRP1 2371 aa8.28□□□□□ -1.08
TPM3-221ENST00000513769 PRR14LQ5THK1 2151 aa8.28□□□□□ -1.08
TPM3-221ENST00000513769 PPIAL4EA0A075B759 164 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 IGKV1D-8A0A087WSZ0 117 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 PPIAL4DF5H284 164 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.27□□□□□ -1.09
TPM3-221ENST00000513769 SDCBPO00560 298 aaPredicted RBP8.27□□□□□ -1.09
TPM3-221ENST00000513769 SSNA1O43805 119 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 PSPNO60542 156 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 ZG16O60844 167 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 ZNF737O75373 536 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 SLC22A5O76082 557 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 RGS11O94810 467 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 HPXP02790 462 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 PPIAL4FP0DN26 164 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 ANXA7P20073 488 aaKnown RBP8.27□□□□□ -1.09
TPM3-221ENST00000513769 ZBTB25P24278 435 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 FCGR2CP31995 323 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 SNRPD2P62316 118 aaKnown RBP8.27□□□□□ -1.09
TPM3-221ENST00000513769 HTD2P86397 168 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 COL10A1Q03692 680 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 CBX3Q13185 183 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 CDSNQ15517 529 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 C17orf107Q6ZR85 190 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 LYG2Q86SG7 212 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 SLC38A6Q8IZM9 456 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 C12orf45Q8N5I9 185 aaPredicted RBP8.27□□□□□ -1.09
TPM3-221ENST00000513769 CD177Q8N6Q3 437 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 OR10J5Q8NHC4 309 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 MARCH1Q8TCQ1 289 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 MITD1Q8WV92 249 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 MRGPRFQ96AM1 343 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 MOB3AQ96BX8 217 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 GALMQ96C23 342 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 AKR1E2Q96JD6 320 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 PHB2Q99623 299 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 RTBDNQ9BSG5 229 aaPredicted RBP8.27□□□□□ -1.09
TPM3-221ENST00000513769 HDHD3Q9BSH5 251 aaPredicted RBP8.27□□□□□ -1.09
TPM3-221ENST00000513769 SAP30LQ9HAJ7 183 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 OR6C3Q9NZP0 311 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 ZNF581Q9P0T4 197 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 IL36RNQ9UBH0 155 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 KAAG1Q9UBP8 84 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 ZNF221Q9UK13 617 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 PPIAL4AQ9Y536 164 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 RP1L1Q8IWN7 2480 aaPredicted RBP8.27□□□□□ -1.09
TPM3-221ENST00000513769 HCFC1P51610 2035 aa8.27□□□□□ -1.09
TPM3-221ENST00000513769 PCNX1Q96RV3 2341 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 USP9YO00507 2555 aaPredicted RBP8.26□□□□□ -1.09
TPM3-221ENST00000513769 BSNQ9UPA5 3926 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 IGKV1D-17A0A075B6S4 117 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 MEIKINA0A087WXM9 373 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 C9orf170A2RU37 121 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 OR5H14A6NHG9 310 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 TMEM178BH3BS89 294 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 LGALS8O00214 317 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 SIRPB1O00241 398 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 TNFRSF13BO14836 293 aaPredicted RBP8.26□□□□□ -1.09
TPM3-221ENST00000513769 WNT9BO14905 357 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 TUSC2O75896 110 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 WNT2P09544 360 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 SCTP09683 121 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 ZNF728P0DKX0 622 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 VSIG10L2P0DP72 767 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 S100GP29377 79 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 CCL8P80075 99 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 CYCSP99999 105 aaKnown RBP8.26□□□□□ -1.09
TPM3-221ENST00000513769 SRSF4Q08170 494 aaKnown RBP8.26□□□□□ -1.09
TPM3-221ENST00000513769 MSMO1Q15800 293 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 HFEQ30201 348 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 TMEM30BQ3MIR4 351 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 LY6G6FQ5SQ64 297 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 LIN54Q6MZP7 749 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 ZNF788Q6ZQV5 615 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 SGPP2Q8IWX5 399 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 MUC20Q8N307 709 aaPredicted RBP8.26□□□□□ -1.09
TPM3-221ENST00000513769 ZBTB34Q8NCN2 500 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 DYRK2Q92630 601 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 CORO2AQ92828 525 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 GALNT14Q96FL9 552 aa8.26□□□□□ -1.09
TPM3-221ENST00000513769 HYLS1Q96M11 299 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms