RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 GADD45AP24522 165 aa4.41□□□□□ -1.7
RFC1-214ENST00000512726 IDH2P48735 452 aaKnown RBP4.41□□□□□ -1.7
RFC1-214ENST00000512726 INPP1P49441 399 aa4.41□□□□□ -1.7
RFC1-214ENST00000512726 SLC25A34Q6PIV7 304 aa4.41□□□□□ -1.7
RFC1-214ENST00000512726 VN1R4Q7Z5H5 301 aa4.41□□□□□ -1.7
RFC1-214ENST00000512726 DAZ4Q86SG3 579 aaKnown RBP4.41□□□□□ -1.7
RFC1-214ENST00000512726 PARD6GQ9BYG4 376 aaPredicted RBP4.41□□□□□ -1.7
RFC1-214ENST00000512726 DAZ1Q9NQZ3 744 aaKnown RBP4.41□□□□□ -1.7
RFC1-214ENST00000512726 UBQLN4Q9NRR5 601 aa4.41□□□□□ -1.7
RFC1-214ENST00000512726 ABCC11Q96J66 1382 aa4.4□□□□□ -1.7
RFC1-214ENST00000512726 CHD2O14647 1828 aaKnown RBP4.4□□□□□ -1.7
RFC1-214ENST00000512726 CYSRT1A8MQ03 144 aa4.4□□□□□ -1.71
RFC1-214ENST00000512726 ISLRO14498 428 aa4.4□□□□□ -1.71
RFC1-214ENST00000512726 TYMSP04818 313 aa4.4□□□□□ -1.71
RFC1-214ENST00000512726 S100A2P29034 98 aa4.4□□□□□ -1.71
RFC1-214ENST00000512726 SULT1A2P50226 295 aa4.4□□□□□ -1.71
RFC1-214ENST00000512726 EIF4EBP1Q13541 118 aaPredicted RBP4.4□□□□□ -1.71
RFC1-214ENST00000512726 HENMT1Q5T8I9 393 aaKnown RBP4.4□□□□□ -1.71
RFC1-214ENST00000512726 FAM131AQ6UXB0 335 aa4.4□□□□□ -1.71
RFC1-214ENST00000512726 SCGB1D4Q6XE38 83 aa4.4□□□□□ -1.71
RFC1-214ENST00000512726 ASB13Q8WXK3 278 aa4.4□□□□□ -1.71
RFC1-214ENST00000512726 LINC00167Q96N53 147 aa4.4□□□□□ -1.71
RFC1-214ENST00000512726 BRWD3Q6RI45 1802 aa4.39□□□□□ -1.71
RFC1-214ENST00000512726 IGKV2-28A0A075B6P5 120 aa4.39□□□□□ -1.71
RFC1-214ENST00000512726 IGHV3-43A0A0B4J1X8 118 aa4.39□□□□□ -1.71
RFC1-214ENST00000512726 TMEM150BA6NC51 233 aa4.39□□□□□ -1.71
RFC1-214ENST00000512726 WISP3O95389 354 aaPredicted RBP4.39□□□□□ -1.71
RFC1-214ENST00000512726 IGKV2D-28P01615 120 aa4.39□□□□□ -1.71
RFC1-214ENST00000512726 LINC00614P0C842 121 aa4.39□□□□□ -1.71
RFC1-214ENST00000512726 KRTAP10-6P60371 365 aaPredicted RBP4.39□□□□□ -1.71
RFC1-214ENST00000512726 CST9Q5W186 159 aa4.39□□□□□ -1.71
RFC1-214ENST00000512726 TMEM144Q7Z5S9 345 aa4.39□□□□□ -1.71
RFC1-214ENST00000512726 AMN1Q8IY45 258 aa4.39□□□□□ -1.71
RFC1-214ENST00000512726 OSR2Q8N2R0 312 aa4.39□□□□□ -1.71
RFC1-214ENST00000512726 REEP6Q96HR9 211 aa4.39□□□□□ -1.71
RFC1-214ENST00000512726 MROQ9BYG7 248 aa4.39□□□□□ -1.71
RFC1-214ENST00000512726 BABAM2Q9NXR7 383 aa4.39□□□□□ -1.71
RFC1-214ENST00000512726 SCN4AP35499 1836 aa4.38□□□□□ -1.71
RFC1-214ENST00000512726 LEUTXA8MZ59 168 aa4.38□□□□□ -1.71
RFC1-214ENST00000512726 IGLL5B9A064 214 aa4.38□□□□□ -1.71
RFC1-214ENST00000512726 CXCR6O00574 342 aa4.38□□□□□ -1.71
RFC1-214ENST00000512726 KCNK2O95069 426 aa4.38□□□□□ -1.71
RFC1-214ENST00000512726 CDRT1O95170 752 aa4.38□□□□□ -1.71
RFC1-214ENST00000512726 AP2S1P53680 142 aaPredicted RBP4.38□□□□□ -1.71
RFC1-214ENST00000512726 ENDOGQ14249 297 aaKnown RBP4.38□□□□□ -1.71
RFC1-214ENST00000512726 LRRN1Q6UXK5 716 aa4.38□□□□□ -1.71
RFC1-214ENST00000512726 ZBTB8OSQ8IWT0 167 aa4.38□□□□□ -1.71
RFC1-214ENST00000512726 ZFP62Q8NB50 900 aaPredicted RBP4.38□□□□□ -1.71
RFC1-214ENST00000512726 SLC37A2Q8TED4 501 aa4.38□□□□□ -1.71
RFC1-214ENST00000512726 TNFAIP8L1Q8WVP5 186 aa4.38□□□□□ -1.71
RFC1-214ENST00000512726 RBPMSQ93062 196 aaKnown RBP4.38□□□□□ -1.71
RFC1-214ENST00000512726 PTH2Q96A98 100 aa4.38□□□□□ -1.71
RFC1-214ENST00000512726 CDCA4Q9BXL8 241 aa4.38□□□□□ -1.71
RFC1-214ENST00000512726 MRPS26Q9BYN8 205 aaKnown RBP4.38□□□□□ -1.71
RFC1-214ENST00000512726 OR51B6Q9H340 312 aa4.38□□□□□ -1.71
RFC1-214ENST00000512726 PLB1Q6P1J6 1458 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 IGHV3-21A0A0B4J1V1 117 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 GOLGA6L4A6NEF3 574 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 F5H5P2 479 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 IGLV7-43P04211 117 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 CTSEP14091 401 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 H2BFSP57053 126 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 MRPS15P82914 257 aaKnown RBP4.37□□□□□ -1.71
RFC1-214ENST00000512726 SPIN4Q56A73 249 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 LPCAT4Q643R3 524 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 LAIR2Q6ISS4 152 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 TBPL2Q6SJ96 375 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 TCF23Q7RTU1 214 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 C10orf67Q8IYJ2 551 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 OR9I1Q8NGQ6 314 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 KLF14Q8TD94 323 aaPredicted RBP4.37□□□□□ -1.71
RFC1-214ENST00000512726 ITFG2Q969R8 447 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 PPP1R14BQ96C90 147 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 SHANK2-AS3Q9BTD1 123 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 TIPINQ9BVW5 301 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 VSIRQ9H7M9 311 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 PARVAQ9NVD7 372 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 C9orf84Q5VXU9 1444 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 ARID1AO14497 2285 aa4.37□□□□□ -1.71
RFC1-214ENST00000512726 SLIT3O75094 1523 aa4.36□□□□□ -1.71
RFC1-214ENST00000512726 ARAP3Q8WWN8 1544 aa4.36□□□□□ -1.71
RFC1-214ENST00000512726 THADAQ6YHU6 1953 aa4.36□□□□□ -1.71
RFC1-214ENST00000512726 NUP205Q92621 2012 aa4.36□□□□□ -1.71
RFC1-214ENST00000512726 ARGFXA6NJG6 315 aa4.36□□□□□ -1.71
RFC1-214ENST00000512726 ZNF98A6NK75 572 aa4.36□□□□□ -1.71
RFC1-214ENST00000512726 IFNA5P01569 189 aa4.36□□□□□ -1.71
RFC1-214ENST00000512726 HBZP02008 142 aa4.36□□□□□ -1.71
RFC1-214ENST00000512726 PSMA1P25786 263 aaKnown RBP4.36□□□□□ -1.71
RFC1-214ENST00000512726 MIPP30301 263 aa4.36□□□□□ -1.71
RFC1-214ENST00000512726 NKX2-5P52952 324 aaPredicted RBP4.36□□□□□ -1.71
RFC1-214ENST00000512726 CEBPGP53567 150 aa4.36□□□□□ -1.71
RFC1-214ENST00000512726 DAD1P61803 113 aa4.36□□□□□ -1.71
RFC1-214ENST00000512726 MMDQ15546 238 aa4.36□□□□□ -1.71
RFC1-214ENST00000512726 IMPG1Q17R60 797 aa4.36□□□□□ -1.71
RFC1-214ENST00000512726 TNFAIP8L2Q6P589 184 aaPredicted RBP4.36□□□□□ -1.71
RFC1-214ENST00000512726 NEGR1Q7Z3B1 354 aa4.36□□□□□ -1.71
RFC1-214ENST00000512726 NATD1Q8N6N6 113 aa4.36□□□□□ -1.71
RFC1-214ENST00000512726 ZNRF2Q8NHG8 242 aa4.36□□□□□ -1.71
RFC1-214ENST00000512726 SPPL2BQ8TCT7 592 aa4.36□□□□□ -1.71
RFC1-214ENST00000512726 TESCQ96BS2 214 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms