RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 MYOD1P15172 320 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 FCGR2BP31994 310 aaPredicted RBP7.83□□□□□ -1.16
VCAN-208ENST00000512590 DNASE2BQ8WZ79 361 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 VSTM2LQ96N03 204 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 OR2V2Q96R30 315 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 PRADC1Q9BSG0 188 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 NAT8Q9UHE5 227 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 WNT7AO00755 349 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 TIMM23O14925 209 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 CST7O76096 145 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 PTBP1P26599 531 aaKnown RBP eCLIP7.83□□□□□ -1.16
VCAN-208ENST00000512590 CDKN1AP38936 164 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 TSPAN7P41732 249 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 FOXA1P55317 472 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 DHRS4L2Q6PKH6 230 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 FAM89BQ8N5H3 189 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 NUDCD2Q8WVJ2 157 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 SORT1Q99523 831 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 SYNGR1O43759 233 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 HMGA2P52926 109 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 PRSS54Q6PEW0 395 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 NCCRP1Q6ZVX7 275 aaPredicted RBP7.83□□□□□ -1.16
VCAN-208ENST00000512590 PARD6AQ9NPB6 346 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 CACNG5Q9UF02 275 aa7.83□□□□□ -1.16
VCAN-208ENST00000512590 TGOLN2O43493 480 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 PTTG1O95997 202 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 HRH1P35367 487 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 S100A7L2Q5SY68 101 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 IGKV6-21A0A0C4DH24 114 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 A0A1W2PNV4 684 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 GAGE10A6NGK3 116 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 ZBTB42B2RXF5 422 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 EDIL3O43854 480 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 PMELP40967 661 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 RPL24P83731 157 aaKnown RBP7.82□□□□□ -1.16
VCAN-208ENST00000512590 TEPPQ6URK8 271 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 ITLN1Q8WWA0 313 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 PDLIM5Q96HC4 596 aaKnown RBP7.82□□□□□ -1.16
VCAN-208ENST00000512590 TMEM38AQ9H6F2 299 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 CSF2RBP32927 897 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 HIST1H3AP68431 136 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 C2orf83Q53S99 150 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 AMER3Q8N944 861 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 GPR137Q96N19 417 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 CHCHD5Q9BSY4 110 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 TMEM191AQ9H0A3 160 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 HSPB8Q9UJY1 196 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 COL14A1Q05707 1796 aaKnown RBP7.82□□□□□ -1.16
VCAN-208ENST00000512590 TRAV21A0A0B4J279 112 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 NPIPB11E5RHQ5 1161 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 TAPBPO15533 448 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 TRGC1P0CF51 173 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 RPL35AP18077 110 aaKnown RBP7.82□□□□□ -1.16
VCAN-208ENST00000512590 PMS2P11Q13670 270 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 FAM78BQ5VT40 261 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 OTUD1Q5VV17 481 aaPredicted RBP7.82□□□□□ -1.16
VCAN-208ENST00000512590 RHBDD2Q6NTF9 364 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 HGDQ93099 445 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 RAB40CQ96S21 281 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 RPP25Q9BUL9 199 aaKnown RBP7.82□□□□□ -1.16
VCAN-208ENST00000512590 CLEC7AQ9BXN2 247 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 ZNF768Q9H5H4 540 aaKnown RBP7.82□□□□□ -1.16
VCAN-208ENST00000512590 B9D1Q9UPM9 204 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 XRN1Q8IZH2 1706 aaKnown RBP7.82□□□□□ -1.16
VCAN-208ENST00000512590 J3QR06 171 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 RAB29O14966 203 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 GABRB1P18505 474 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 KIRREL2Q6UWL6 708 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 NT5CQ8TCD5 201 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 RAB24Q969Q5 203 aa7.82□□□□□ -1.16
VCAN-208ENST00000512590 KIF20BQ96Q89 1820 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 PYCARD-AS1I3L0S3 204 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 TBX10O75333 385 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 CYB5R3P00387 301 aaPredicted RBP7.81□□□□□ -1.16
VCAN-208ENST00000512590 HTRA4P83105 476 aaPredicted RBP7.81□□□□□ -1.16
VCAN-208ENST00000512590 CCSMST1Q4G0I0 132 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 FAM214BQ7L5A3 538 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 MAP6Q96JE9 813 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 C10orf90Q96M02 699 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 TEX101Q9BY14 249 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 AKIRIN1Q9H9L7 192 aaPredicted RBP7.81□□□□□ -1.16
VCAN-208ENST00000512590 RALYQ9UKM9 306 aaKnown RBP7.81□□□□□ -1.16
VCAN-208ENST00000512590 ASB1Q9Y576 335 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 LINC00862A6NCI5 91 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 ITGBL1O95965 494 aaPredicted RBP7.81□□□□□ -1.16
VCAN-208ENST00000512590 IL6RP08887 468 aaPredicted RBP7.81□□□□□ -1.16
VCAN-208ENST00000512590 CTF1Q16619 201 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 PRICKLE4Q2TBC4 344 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 OR10J3Q5JRS4 329 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 ZDHHC22Q8N966 263 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 C2CD4CQ8TF44 421 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 HAPLN2Q9GZV7 340 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 LYRM2Q9NU23 88 aaPredicted RBP7.81□□□□□ -1.16
VCAN-208ENST00000512590 TMEM38BQ9NVV0 291 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 CBY1Q9Y3M2 126 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 ARHGEF28Q8N1W1 1705 aaKnown RBP7.81□□□□□ -1.16
VCAN-208ENST00000512590 LNP1A1A4G5 178 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 TMEM8BA6NDV4 472 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 ANXA2RQ3ZCQ2 193 aa7.81□□□□□ -1.16
VCAN-208ENST00000512590 LEMD1Q68G75 181 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms