RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 CEACAM1P13688 526 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 HOXA1P49639 335 aaPredicted RBP7.86□□□□□ -1.15
CPNE4-210ENST00000512332 FHITP49789 147 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 PPT1P50897 306 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 ERVK11-1P61568 191 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 HIKESHIQ53FT3 197 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 SP5Q6BEB4 398 aaPredicted RBP7.86□□□□□ -1.15
CPNE4-210ENST00000512332 Q6P435 159 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 LINC00518Q8N0U6 118 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 RTL8AQ9BWD3 113 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 PARP12Q9H0J9 701 aaKnown RBP7.86□□□□□ -1.15
CPNE4-210ENST00000512332 SLC35B3Q9H1N7 401 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 ZDHHC11Q9H8X9 412 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 FRYLO94915 3013 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 TRGV5A0A0B4J1U4 118 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 M0R296 226 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 HSD17B6O14756 317 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 CRYBA1P05813 215 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 ACAA1P09110 424 aaPredicted RBP7.86□□□□□ -1.15
CPNE4-210ENST00000512332 MRPL49Q13405 166 aaKnown RBP7.86□□□□□ -1.15
CPNE4-210ENST00000512332 TBC1D28Q2M2D7 210 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 RNF212Q495C1 297 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.86□□□□□ -1.15
CPNE4-210ENST00000512332 MDP1Q86V88 176 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 IL22RA1Q8N6P7 574 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 RXFP4Q8TDU9 374 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 TMEM171Q8WVE6 324 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 RDH5Q92781 318 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 LSM10Q969L4 123 aaKnown RBP7.86□□□□□ -1.15
CPNE4-210ENST00000512332 GMPPAQ96IJ6 420 aaPredicted RBP7.86□□□□□ -1.15
CPNE4-210ENST00000512332 EIF5A2Q9GZV4 153 aaKnown RBP7.86□□□□□ -1.15
CPNE4-210ENST00000512332 BIN3Q9NQY0 253 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 POLDIP2Q9Y2S7 368 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 LIPGQ9Y5X9 500 aa7.86□□□□□ -1.15
CPNE4-210ENST00000512332 MED13Q9UHV7 2174 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 HSPB6O14558 160 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 HS3ST1O14792 307 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 SSSCA1O60232 199 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 C1QL1O75973 258 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 TMEM50AO95807 157 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 ZNF14P17017 642 aaPredicted RBP7.85□□□□□ -1.15
CPNE4-210ENST00000512332 CA6P23280 308 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 ATP6V0CP27449 155 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 C3AR1Q16581 482 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 OR2T2Q6IF00 324 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 DPPA3Q6W0C5 159 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 C5orf24Q7Z6I8 188 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 ODF3L1Q8IXM7 274 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 TMEM178AQ8NBL3 297 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 OR5C1Q8NGR4 320 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 OR2G3Q8NGZ4 309 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 ZNF488Q96MN9 340 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 RAB40CQ96S21 281 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 C12orf49Q9H741 205 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 TAAR3PQ9P1P4 343 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 ARHGAP21Q5T5U3 1957 aa7.85□□□□□ -1.15
CPNE4-210ENST00000512332 KIAA1324LA8MWY0 1029 aaPredicted RBP7.84□□□□□ -1.15
CPNE4-210ENST00000512332 ZNHIT1O43257 154 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 CHST1O43916 411 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 RHBDL1O75783 438 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 SERPINE2P07093 398 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 HOXB1P14653 301 aaPredicted RBP7.84□□□□□ -1.15
CPNE4-210ENST00000512332 RAC2P15153 192 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 CD200P41217 278 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 PAX9P55771 341 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 TGFBR3Q03167 851 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 ZNF146Q15072 292 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 RHEBQ15382 184 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 ZNF766Q5HY98 468 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 HES3Q5TGS1 186 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 ZNF497Q6ZNH5 498 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 TMEM182Q6ZP80 229 aaPredicted RBP7.84□□□□□ -1.15
CPNE4-210ENST00000512332 SUMF1Q8NBK3 374 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 OR10V1Q8NGI7 309 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 FAM213BQ8TBF2 198 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 DEFB127Q9H1M4 99 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 KCNJ16Q9NPI9 418 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 MBNL3Q9NUK0 354 aaKnown RBP7.84□□□□□ -1.15
CPNE4-210ENST00000512332 SPRR3Q9UBC9 169 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 ERRFI1Q9UJM3 462 aaPredicted RBP7.84□□□□□ -1.15
CPNE4-210ENST00000512332 C7orf77A4D0Y5 90 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 WRBO00258 174 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 SMPD2O60906 423 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 DFFBO76075 338 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 CNOT4O95628 575 aaKnown RBP7.84□□□□□ -1.15
CPNE4-210ENST00000512332 MT-ND4LP03901 98 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 ZNF44P15621 663 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 CLINT1Q14677 625 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 GABRA6Q16445 453 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 RNFT1Q5M7Z0 435 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 DHRS13Q6UX07 377 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 C17orf78Q8N4C9 275 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 OR1J1Q8NGS3 322 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 MAGT1Q9H0U3 335 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 SAV1Q9H4B6 383 aaPredicted RBP7.84□□□□□ -1.15
CPNE4-210ENST00000512332 UNKLQ9H9P5 680 aaKnown RBP7.84□□□□□ -1.15
CPNE4-210ENST00000512332 WIPI2Q9Y4P8 454 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 WSB1Q9Y6I7 421 aa7.84□□□□□ -1.15
CPNE4-210ENST00000512332 SLC33A1O00400 549 aaPredicted RBP7.83□□□□□ -1.16
CPNE4-210ENST00000512332 IGLV2-14P01704 120 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms