RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 HIVEP3Q5T1R4 2406 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 CACNA1DQ01668 2161 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 IGHV3OR15-7A0A075B7D8 119 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 MEIKINA0A087WXM9 373 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 A0A0B4J293 547 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 TEX13DA0A0J9YY54 714 aaPredicted RBP6.78□□□□□ -1.32
HTT-209ENST00000512068 OOEPA6NGQ2 149 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 MGST3O14880 152 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 CYB5R3P00387 301 aaPredicted RBP6.78□□□□□ -1.32
HTT-209ENST00000512068 PLAUP00749 431 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 PSG2P11465 335 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 MUC1P15941 1255 aaPredicted RBP6.78□□□□□ -1.32
HTT-209ENST00000512068 EGR1P18146 543 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 LMO1P25800 156 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 IL2RGP31785 369 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 PPOXP50336 477 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 IL13RA1P78552 427 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 EDDM3AQ14507 147 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 CDSNQ15517 529 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 HFEQ30201 348 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 ZFP69Q49AA0 526 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 ATPAF1Q5TC12 328 aaPredicted RBP6.78□□□□□ -1.32
HTT-209ENST00000512068 SLC35E4Q6ICL7 350 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 ZNF497Q6ZNH5 498 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 SLC25A42Q86VD7 318 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 SGPP2Q8IWX5 399 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 PRR18Q8N4B5 295 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 ZNF561Q8N587 486 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 TMEM185AQ8NFB2 350 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 COQ8AQ8NI60 647 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 ZNF431Q8TF32 576 aaPredicted RBP6.78□□□□□ -1.32
HTT-209ENST00000512068 IL1F10Q8WWZ1 152 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 CCL17Q92583 94 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 KIRREL1Q96J84 757 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 SNX22Q96L94 193 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 PHB2Q99623 299 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 GHITMQ9H3K2 345 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 ZNF665Q9H7R5 613 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 SEBOXQ9HB31 216 aaPredicted RBP6.78□□□□□ -1.32
HTT-209ENST00000512068 MGAT4CQ9UBM8 478 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 VSIG4Q9Y279 399 aa6.78□□□□□ -1.32
HTT-209ENST00000512068 PPIAL4EA0A075B759 164 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 IGKV1D-8A0A087WSZ0 117 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 TRAV20A0A0B4J274 112 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 IGHV1-69-2A0A0G2JMI3 117 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 A8MV72 311 aaPredicted RBP6.77□□□□□ -1.33
HTT-209ENST00000512068 DEFB108AA8MXU0 73 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 PPIAL4DF5H284 164 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 BOLA2-SMG1P6H3BVE0 249 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 LGALS8O00214 317 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 SPINT2O43291 252 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 GOSR1O95249 250 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 PRB1P04280 392 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 CTSDP07339 412 aaPredicted RBP6.77□□□□□ -1.33
HTT-209ENST00000512068 PPIAL4FP0DN26 164 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 VSIG10L2P0DP72 767 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 NFYAP23511 347 aaPredicted RBP6.77□□□□□ -1.33
HTT-209ENST00000512068 RBMXP38159 391 aaKnown RBP6.77□□□□□ -1.33
HTT-209ENST00000512068 OR3A1P47881 315 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 EDDM3BP56851 147 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 BAMBIQ13145 260 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 FCN2Q15485 313 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 TMEM128Q5BJH2 165 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 MEX3BQ6ZN04 569 aaKnown RBP6.77□□□□□ -1.33
HTT-209ENST00000512068 C17orf107Q6ZR85 190 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 SLC36A1Q7Z2H8 476 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 LYG2Q86SG7 212 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 LHFPL1Q86WI0 220 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 SLC38A6Q8IZM9 456 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 C12orf45Q8N5I9 185 aaPredicted RBP6.77□□□□□ -1.33
HTT-209ENST00000512068 DEFB108BQ8NET1 73 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 LILRB1Q8NHL6 650 aaPredicted RBP6.77□□□□□ -1.33
HTT-209ENST00000512068 PLPPR1Q8TBJ4 325 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 CASTOR1Q8WTX7 329 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 GALMQ96C23 342 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 PDCD10Q9BUL8 212 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 CBLN4Q9NTU7 201 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 MBNL3Q9NUK0 354 aaKnown RBP6.77□□□□□ -1.33
HTT-209ENST00000512068 TMEM106BQ9NUM4 274 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 AP5S1Q9NUS5 200 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 SLC23A1Q9UHI7 598 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 KIF25Q9UIL4 384 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 GPR132Q9UNW8 380 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 KCNIP3Q9Y2W7 256 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 PPIAL4AQ9Y536 164 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 DSPP15924 2871 aaKnown RBP6.77□□□□□ -1.33
HTT-209ENST00000512068 BSNQ9UPA5 3926 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 ANKHD1Q8IWZ3 2542 aaKnown RBP6.77□□□□□ -1.33
HTT-209ENST00000512068 TANC2Q9HCD6 1990 aa6.77□□□□□ -1.33
HTT-209ENST00000512068 RAI1Q7Z5J4 1906 aaPredicted RBP6.76□□□□□ -1.33
HTT-209ENST00000512068 IGKV1D-17A0A075B6S4 117 aa6.76□□□□□ -1.33
HTT-209ENST00000512068 OR5H14A6NHG9 310 aa6.76□□□□□ -1.33
HTT-209ENST00000512068 GOSR2O14653 212 aa6.76□□□□□ -1.33
HTT-209ENST00000512068 PSPNO60542 156 aa6.76□□□□□ -1.33
HTT-209ENST00000512068 SLC22A5O76082 557 aa6.76□□□□□ -1.33
HTT-209ENST00000512068 LHBP01229 141 aa6.76□□□□□ -1.33
HTT-209ENST00000512068 PPYP01298 95 aa6.76□□□□□ -1.33
HTT-209ENST00000512068 GYPAP02724 150 aa6.76□□□□□ -1.33
HTT-209ENST00000512068 HPXP02790 462 aa6.76□□□□□ -1.33
HTT-209ENST00000512068 SCTP09683 121 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms