RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 THRSPQ92748 146 aa13.23□□□□□ -0.29
DDX41-213ENST00000512027 Q96M66 194 aa13.23□□□□□ -0.29
DDX41-213ENST00000512027 MMP28Q9H239 520 aa13.23□□□□□ -0.29
DDX41-213ENST00000512027 RANBP3Q9H6Z4 567 aaPredicted RBP13.23□□□□□ -0.29
DDX41-213ENST00000512027 PCDHB16Q9NRJ7 776 aa13.23□□□□□ -0.29
DDX41-213ENST00000512027 PSG11Q9UQ72 335 aa13.23□□□□□ -0.29
DDX41-213ENST00000512027 IGHV3-43A0A0B4J1X8 118 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 UBE2QL1A1L167 161 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 FAM90A22PA8MWA6 464 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 LY6LH3BQJ8 138 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 C15orf65H3BRN8 121 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 J3QR06 171 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 AIPO00170 330 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 TSPAN15O95858 294 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 MPIG6BO95866 241 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 UCHL1P09936 223 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 IGHV3-43DP0DP04 118 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 VSIG10L2P0DP72 767 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 PRRX1P54821 245 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 BLCAPP62952 87 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 HSD17B12Q53GQ0 312 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 ZNF497Q6ZNH5 498 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 TMEM91Q6ZNR0 172 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 PRSS48Q7RTY5 328 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 C5orf24Q7Z6I8 188 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 OR4K15Q8NH41 348 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 ARL11Q969Q4 196 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 GFI1Q99684 422 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 UQCC2Q9BRT2 126 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 LINC00574Q9H8X3 128 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 ETAA1Q9NY74 926 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 PITPNC1Q9UKF7 332 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 PEX16Q9Y5Y5 336 aa13.22□□□□□ -0.29
DDX41-213ENST00000512027 MCRIP1C9JLW8 97 aa13.21□□□□□ -0.29
DDX41-213ENST00000512027 MT-ND4P03905 459 aa13.21□□□□□ -0.29
DDX41-213ENST00000512027 SRMP19623 302 aa13.21□□□□□ -0.29
DDX41-213ENST00000512027 TPBGQ13641 420 aa13.21□□□□□ -0.29
DDX41-213ENST00000512027 MRPS24Q96EL2 167 aaKnown RBP13.21□□□□□ -0.29
DDX41-213ENST00000512027 SERTAD4Q9NUC0 356 aa13.21□□□□□ -0.29
DDX41-213ENST00000512027 SH2D7A6NKC9 451 aaPredicted RBP13.2□□□□□ -0.3
DDX41-213ENST00000512027 M0QZ24 198 aa13.2□□□□□ -0.3
DDX41-213ENST00000512027 TIMM23O14925 209 aa13.2□□□□□ -0.3
DDX41-213ENST00000512027 VSIG8P0DPA2 414 aa13.2□□□□□ -0.3
DDX41-213ENST00000512027 CEACAM3P40198 252 aa13.2□□□□□ -0.3
DDX41-213ENST00000512027 MLLT11Q13015 90 aaPredicted RBP13.2□□□□□ -0.3
DDX41-213ENST00000512027 NKAPLQ5M9Q1 402 aa13.2□□□□□ -0.3
DDX41-213ENST00000512027 C1orf100Q5SVJ3 147 aa13.2□□□□□ -0.3
DDX41-213ENST00000512027 SYT6Q5T7P8 510 aaPredicted RBP13.2□□□□□ -0.3
DDX41-213ENST00000512027 GLT8D1Q68CQ7 371 aa13.2□□□□□ -0.3
DDX41-213ENST00000512027 LYG1Q8N1E2 194 aa13.2□□□□□ -0.3
DDX41-213ENST00000512027 PHYHIPQ92561 330 aa13.2□□□□□ -0.3
DDX41-213ENST00000512027 TOMM40LQ969M1 308 aa13.2□□□□□ -0.3
DDX41-213ENST00000512027 MGLLQ99685 303 aa13.2□□□□□ -0.3
DDX41-213ENST00000512027 NICN1Q9BSH3 213 aa13.2□□□□□ -0.3
DDX41-213ENST00000512027 SPACA1Q9HBV2 294 aa13.2□□□□□ -0.3
DDX41-213ENST00000512027 RAB26Q9ULW5 256 aa13.2□□□□□ -0.3
DDX41-213ENST00000512027 NOTCH1P46531 2555 aa13.2□□□□□ -0.3
DDX41-213ENST00000512027 C12orf77C9JDV5 145 aa13.19□□□□□ -0.3
DDX41-213ENST00000512027 SDCBPO00560 298 aaPredicted RBP13.19□□□□□ -0.3
DDX41-213ENST00000512027 CPEP16870 476 aa13.19□□□□□ -0.3
DDX41-213ENST00000512027 RCC1P18754 421 aaPredicted RBP13.19□□□□□ -0.3
DDX41-213ENST00000512027 BRS3P32247 399 aa13.19□□□□□ -0.3
DDX41-213ENST00000512027 FABP5Q01469 135 aa13.19□□□□□ -0.3
DDX41-213ENST00000512027 UNC119Q13432 240 aa13.19□□□□□ -0.3
DDX41-213ENST00000512027 HERPUD1Q15011 391 aa13.19□□□□□ -0.3
DDX41-213ENST00000512027 P2RY14Q15391 338 aa13.19□□□□□ -0.3
DDX41-213ENST00000512027 ARSJQ5FYB0 599 aaPredicted RBP13.19□□□□□ -0.3
DDX41-213ENST00000512027 Q8N2B8 174 aa13.19□□□□□ -0.3
DDX41-213ENST00000512027 PRR18Q8N4B5 295 aa13.19□□□□□ -0.3
DDX41-213ENST00000512027 OR56B4Q8NH76 319 aa13.19□□□□□ -0.3
DDX41-213ENST00000512027 OR1L1Q8NH94 360 aa13.19□□□□□ -0.3
DDX41-213ENST00000512027 CAPSLQ8WWF8 208 aa13.19□□□□□ -0.3
DDX41-213ENST00000512027 RPEQ96AT9 228 aa13.19□□□□□ -0.3
DDX41-213ENST00000512027 RBMXL1Q96E39 390 aaKnown RBP13.19□□□□□ -0.3
DDX41-213ENST00000512027 SLC25A33Q9BSK2 321 aa13.19□□□□□ -0.3
DDX41-213ENST00000512027 PRSS22Q9GZN4 317 aa13.19□□□□□ -0.3
DDX41-213ENST00000512027 ISYNA1Q9NPH2 558 aa13.19□□□□□ -0.3
DDX41-213ENST00000512027 TRAPPC2LQ9UL33 140 aa13.19□□□□□ -0.3
DDX41-213ENST00000512027 AK6Q9Y3D8 172 aaKnown RBP13.19□□□□□ -0.3
DDX41-213ENST00000512027 AMMECR1Q9Y4X0 333 aaPredicted RBP13.19□□□□□ -0.3
DDX41-213ENST00000512027 A0A1W2PPI3 338 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 FAM90A10PA6NDY2 464 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 FAM90A18PA6NE21 464 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 FAM90A16PA6NEW6 464 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 FAM90A20PA6NIJ5 464 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 FAM90A7PA6NKC0 464 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 FAM90A12PA8MX19 464 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 FAM90A5PA8MXJ8 464 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 FAM90A23PA8MXZ1 464 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 SLC22A1O15245 554 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 SLC31A2O15432 143 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 PDCD6O75340 191 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 FAM90A15PP0C7V4 464 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 FAM90A13PP0C7W8 464 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 FAM90A14PP0C7W9 464 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 FAM90A24PP0C7X0 464 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 GZMHP20718 246 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 FUT3P21217 361 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 HTR2CP28335 458 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 REG1BP48304 166 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms