RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 NDNFQ8TB73 568 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 C4orf3Q8WVX3 66 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 LIPHQ8WWY8 451 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 RPL3LQ92901 407 aaKnown RBP4.4□□□□□ -1.71
USP53-206ENST00000510737 SDSLQ96GA7 329 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 TMED9Q9BVK6 235 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 TUBA4BQ9H853 241 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 YY1AP1Q9H869 796 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 GLS2Q9UI32 602 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 RPS6KA6Q9UK32 745 aa4.4□□□□□ -1.71
USP53-206ENST00000510737 KLK5Q9Y337 293 aaPredicted RBP4.4□□□□□ -1.71
USP53-206ENST00000510737 UTP11Q9Y3A2 253 aaKnown RBP4.4□□□□□ -1.71
USP53-206ENST00000510737 I3L521 148 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 IGHG2P01859 326 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 IGF1P05019 195 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 OR8U8P0C7N1 319 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 ZCCHC18P0CG32 403 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 BRS3P32247 399 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 ALDH3A2P51648 485 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 GABPB1Q06547 395 aaPredicted RBP4.39□□□□□ -1.71
USP53-206ENST00000510737 GPR50Q13585 617 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 RGNQ15493 299 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 SNAPC1Q16533 368 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 GLYATL3Q5SZD4 288 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 GPR139Q6DWJ6 353 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 C5orf56Q8N8D9 126 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 CCDC63Q8NA47 563 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 POC5Q8NA72 575 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 SPATA4Q8NEY3 305 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 OR56B2PQ8NGI1 322 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 OR4P4Q8NGL7 312 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 OR10Z1Q8NGY1 313 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 OR8S1Q8NH09 359 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 PPP1R36Q96LQ0 422 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 YTHDF1Q9BYJ9 559 aaKnown RBP4.39□□□□□ -1.71
USP53-206ENST00000510737 HDHD2Q9H0R4 259 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 GRPEL1Q9HAV7 217 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 THUMPD1Q9NXG2 353 aaKnown RBP4.39□□□□□ -1.71
USP53-206ENST00000510737 ELF5Q9UKW6 265 aaPredicted RBP4.39□□□□□ -1.71
USP53-206ENST00000510737 LHFPL6Q9Y693 200 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 SRRM2Q9UQ35 2752 aaKnown RBP4.39□□□□□ -1.71
USP53-206ENST00000510737 RNF213Q63HN8 5207 aa4.39□□□□□ -1.71
USP53-206ENST00000510737 A0A1W2PPK0 400 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 A6NIZ1 184 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 C5orf58C9J3I9 102 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 RBMY1A1P0DJD3 496 aaKnown RBP4.38□□□□□ -1.71
USP53-206ENST00000510737 PIPP12273 146 aaPredicted RBP4.38□□□□□ -1.71
USP53-206ENST00000510737 HTR1DP28221 377 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 ALDH3A1P30838 453 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 CAPZA1P52907 286 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 CLNS1AP54105 237 aaKnown RBP4.38□□□□□ -1.71
USP53-206ENST00000510737 RAP1BP61224 184 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 ACTA2P62736 377 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 RAP1AP62834 184 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 ACTG2P63267 376 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 ACTC1P68032 377 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 ACTA1P68133 377 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 ZNF616Q08AN1 781 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 LRRC74AQ0VAA2 488 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 IL18R1Q13478 541 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 MEP1BQ16820 701 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 DUSP7Q16829 419 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 PRR27Q6MZM9 219 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 SLC35E3Q7Z769 313 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 NKAIN4Q8IVV8 208 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 SMYD1Q8NB12 490 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 GPR32P1Q8NGA4 272 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 ARPC1AQ92747 370 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 SGTBQ96EQ0 304 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 MPP4Q96JB8 637 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 OR5B12Q96R08 314 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 FGF23Q9GZV9 251 aaPredicted RBP4.38□□□□□ -1.71
USP53-206ENST00000510737 GHITMQ9H3K2 345 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 SIGLEC8Q9NYZ4 499 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 DPM3Q9P2X0 92 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 RNF150Q9ULK6 438 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 SAR1BQ9Y6B6 198 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 HSPE1-MOB4S4R3N1 261 aa4.38□□□□□ -1.71
USP53-206ENST00000510737 IGHV2-26A0A0B4J1V2 119 aa4.37□□□□□ -1.71
USP53-206ENST00000510737 TRAPPC13A5PLN9 417 aa4.37□□□□□ -1.71
USP53-206ENST00000510737 RFPL4AA6NLU0 287 aa4.37□□□□□ -1.71
USP53-206ENST00000510737 ANKRD30BLA7E2S9 258 aa4.37□□□□□ -1.71
USP53-206ENST00000510737 RFPL4AL1F8VTS6 287 aa4.37□□□□□ -1.71
USP53-206ENST00000510737 SLC16A7O60669 478 aa4.37□□□□□ -1.71
USP53-206ENST00000510737 MTRF1O75570 445 aaKnown RBP4.37□□□□□ -1.71
USP53-206ENST00000510737 MMP23AO75900 390 aa4.37□□□□□ -1.71
USP53-206ENST00000510737 OR5F1O95221 314 aa4.37□□□□□ -1.71
USP53-206ENST00000510737 IGLV1-51P01701 117 aa4.37□□□□□ -1.71
USP53-206ENST00000510737 ZNF728P0DKX0 622 aa4.37□□□□□ -1.71
USP53-206ENST00000510737 GLRA1P23415 457 aa4.37□□□□□ -1.71
USP53-206ENST00000510737 PSMB8P28062 276 aa4.37□□□□□ -1.71
USP53-206ENST00000510737 KIR3DL2P43630 455 aa4.37□□□□□ -1.71
USP53-206ENST00000510737 CDK6Q00534 326 aa4.37□□□□□ -1.71
USP53-206ENST00000510737 RUNX1Q01196 453 aa4.37□□□□□ -1.71
USP53-206ENST00000510737 MFGE8Q08431 387 aaPredicted RBP4.37□□□□□ -1.71
USP53-206ENST00000510737 MESTQ5EB52 335 aa4.37□□□□□ -1.71
USP53-206ENST00000510737 REEP3Q6NUK4 255 aa4.37□□□□□ -1.71
USP53-206ENST00000510737 SMARCD3Q6STE5 483 aa4.37□□□□□ -1.71
USP53-206ENST00000510737 ZNF645Q8N7E2 425 aa4.37□□□□□ -1.71
USP53-206ENST00000510737 ZNF491Q8N8L2 437 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms