RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 FBXW12Q6X9E4 464 aa12.33□□□□□ -0.44
DDX41-208ENST00000507955 UBAC2Q8NBM4 344 aa12.33□□□□□ -0.44
DDX41-208ENST00000507955 MRPL30Q8TCC3 161 aaKnown RBP12.33□□□□□ -0.44
DDX41-208ENST00000507955 SH3BGRL3Q9H299 93 aa12.33□□□□□ -0.44
DDX41-208ENST00000507955 OR51I2Q9H344 312 aa12.33□□□□□ -0.44
DDX41-208ENST00000507955 BIN3Q9NQY0 253 aa12.33□□□□□ -0.44
DDX41-208ENST00000507955 SMPD2O60906 423 aa12.32□□□□□ -0.44
DDX41-208ENST00000507955 GRPP07492 148 aa12.32□□□□□ -0.44
DDX41-208ENST00000507955 CTAG1AP78358 180 aa12.32□□□□□ -0.44
DDX41-208ENST00000507955 FAM76BQ5HYJ3 339 aa12.32□□□□□ -0.44
DDX41-208ENST00000507955 DPPA2Q7Z7J5 298 aa12.32□□□□□ -0.44
DDX41-208ENST00000507955 SLC25A40Q8TBP6 338 aa12.32□□□□□ -0.44
DDX41-208ENST00000507955 SYT3Q9BQG1 590 aa12.32□□□□□ -0.44
DDX41-208ENST00000507955 ARV1Q9H2C2 271 aa12.32□□□□□ -0.44
DDX41-208ENST00000507955 MPV17P39210 176 aa12.32□□□□□ -0.44
DDX41-208ENST00000507955 PPP1CBP62140 327 aa12.32□□□□□ -0.44
DDX41-208ENST00000507955 IZUMO4Q1ZYL8 232 aa12.32□□□□□ -0.44
DDX41-208ENST00000507955 TBC1D28Q2M2D7 210 aa12.32□□□□□ -0.44
DDX41-208ENST00000507955 SCCPDHQ8NBX0 429 aa12.32□□□□□ -0.44
DDX41-208ENST00000507955 C14orf79Q96F83 325 aa12.32□□□□□ -0.44
DDX41-208ENST00000507955 GMPPAQ96IJ6 420 aaPredicted RBP12.32□□□□□ -0.44
DDX41-208ENST00000507955 SUCNR1Q9BXA5 334 aa12.32□□□□□ -0.44
DDX41-208ENST00000507955 DLL3Q9NYJ7 618 aa12.32□□□□□ -0.44
DDX41-208ENST00000507955 OR1A1Q9P1Q5 309 aa12.32□□□□□ -0.44
DDX41-208ENST00000507955 UBE2J1Q9Y385 318 aaPredicted RBP12.32□□□□□ -0.44
DDX41-208ENST00000507955 H7C1Q1 480 aa12.31□□□□□ -0.44
DDX41-208ENST00000507955 UBE2NP61088 152 aaKnown RBP12.31□□□□□ -0.44
DDX41-208ENST00000507955 FAM53AQ6NSI3 398 aaPredicted RBP12.31□□□□□ -0.44
DDX41-208ENST00000507955 PCSK4Q6UW60 755 aa12.31□□□□□ -0.44
DDX41-208ENST00000507955 ZNF573Q86YE8 665 aa12.31□□□□□ -0.44
DDX41-208ENST00000507955 LGI3Q8N145 548 aa12.31□□□□□ -0.44
DDX41-208ENST00000507955 ZNF565Q8N9K5 539 aa12.31□□□□□ -0.44
DDX41-208ENST00000507955 C9orf106Q8NAJ2 232 aa12.31□□□□□ -0.44
DDX41-208ENST00000507955 SFT2D1Q8WV19 159 aa12.31□□□□□ -0.44
DDX41-208ENST00000507955 CLCF1Q9UBD9 225 aa12.31□□□□□ -0.44
DDX41-208ENST00000507955 RCL1Q9Y2P8 373 aaKnown RBP12.31□□□□□ -0.44
DDX41-208ENST00000507955 HEATR1Q9H583 2144 aaKnown RBP12.31□□□□□ -0.44
DDX41-208ENST00000507955 TRDCB7Z8K6 153 aa12.31□□□□□ -0.44
DDX41-208ENST00000507955 SNCAP37840 140 aa12.31□□□□□ -0.44
DDX41-208ENST00000507955 ZNF826PQ6ZT77 177 aa12.31□□□□□ -0.44
DDX41-208ENST00000507955 SAXO1Q8IYX7 474 aa12.31□□□□□ -0.44
DDX41-208ENST00000507955 OR1J1Q8NGS3 322 aa12.31□□□□□ -0.44
DDX41-208ENST00000507955 TINAGQ9UJW2 476 aa12.31□□□□□ -0.44
DDX41-208ENST00000507955 MPC1Q9Y5U8 109 aa12.31□□□□□ -0.44
DDX41-208ENST00000507955 ATP23Q9Y6H3 246 aa12.31□□□□□ -0.44
DDX41-208ENST00000507955 SLC34A2O95436 690 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 DAOP14920 347 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 OMGP23515 440 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 UCP3P55916 312 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 POLR2GP62487 172 aaKnown RBP eCLIP12.3□□□□□ -0.44
DDX41-208ENST00000507955 PSG7Q13046 419 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 SWI5Q1ZZU3 235 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 CXorf66Q5JRM2 361 aaPredicted RBP12.3□□□□□ -0.44
DDX41-208ENST00000507955 FAM214BQ7L5A3 538 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 LILRB1Q8NHL6 650 aaPredicted RBP12.3□□□□□ -0.44
DDX41-208ENST00000507955 PLPPR1Q8TBJ4 325 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 NANOS1Q8WY41 292 aaKnown RBP12.3□□□□□ -0.44
DDX41-208ENST00000507955 HIST1H2BAQ96A08 127 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 TMEM222Q9H0R3 208 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 PLEKHA2Q9HB19 425 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 LUZP4Q9P127 313 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 RELNP78509 3460 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 E5RGE8 158 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 PROB1E7EW31 1015 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 DEGS1O15121 323 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 TSPAN15O95858 294 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 DANCRP0C864 163 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 ZNF616Q08AN1 781 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 ZNF154Q13106 437 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 GABRA6Q16445 453 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 MPV17LQ2QL34 196 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 OR51H1Q8NH63 302 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 C20orf24Q9BUV8 137 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 CDH20Q9HBT6 801 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 SMCO4Q9NRQ5 59 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 PLSCR2Q9NRY7 297 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 OR14J1Q9UGF5 321 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 ERRFI1Q9UJM3 462 aaPredicted RBP12.3□□□□□ -0.44
DDX41-208ENST00000507955 NSG2Q9Y328 171 aa12.3□□□□□ -0.44
DDX41-208ENST00000507955 FAM90A10PA6NDY2 464 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 FAM90A18PA6NE21 464 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 FAM90A16PA6NEW6 464 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 FAM90A20PA6NIJ5 464 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 FAM90A8PA6NJQ4 464 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 FAM90A7PA6NKC0 464 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 FAM90A22PA8MWA6 464 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 FAM90A12PA8MX19 464 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 FAM90A5PA8MXJ8 464 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 FAM90A23PA8MXZ1 464 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 WNT9BO14905 357 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 ADAM20O43506 726 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 EIF3GO75821 320 aaKnown RBP eCLIP12.29□□□□□ -0.44
DDX41-208ENST00000507955 FAM90A15PP0C7V4 464 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 FAM90A13PP0C7W8 464 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 FAM90A14PP0C7W9 464 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 FAM90A24PP0C7X0 464 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 KIR2DL2P43627 348 aaPredicted RBP12.29□□□□□ -0.44
DDX41-208ENST00000507955 AWAT1Q58HT5 328 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 ZNF695Q8IW36 515 aa12.29□□□□□ -0.44
DDX41-208ENST00000507955 LRTM2Q8N967 370 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms