RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 LINC00527Q9UJ94 153 aa19.53■□□□□ 0.72
HERC4-212ENST00000505760 NUDT19A8MXV4 375 aa19.52■□□□□ 0.72
HERC4-212ENST00000505760 CCRL2O00421 344 aa19.52■□□□□ 0.72
HERC4-212ENST00000505760 GEMIN2O14893 280 aaKnown RBP19.52■□□□□ 0.72
HERC4-212ENST00000505760 GAPDHP04406 335 aaKnown RBP19.52■□□□□ 0.72
HERC4-212ENST00000505760 DCKP27707 260 aa19.52■□□□□ 0.72
HERC4-212ENST00000505760 BDKRB2P30411 391 aa19.52■□□□□ 0.72
HERC4-212ENST00000505760 HOXD3P31249 432 aaPredicted RBP19.52■□□□□ 0.72
HERC4-212ENST00000505760 ATAD3CQ5T2N8 411 aa19.52■□□□□ 0.72
HERC4-212ENST00000505760 FOXRED2Q8IWF2 684 aa19.52■□□□□ 0.72
HERC4-212ENST00000505760 PQLC1Q8N2U9 271 aa19.52■□□□□ 0.72
HERC4-212ENST00000505760 NEK7Q8TDX7 302 aa19.52■□□□□ 0.72
HERC4-212ENST00000505760 ARL11Q969Q4 196 aa19.52■□□□□ 0.72
HERC4-212ENST00000505760 WBP4O75554 376 aaKnown RBP19.51■□□□□ 0.71
HERC4-212ENST00000505760 REG1BP48304 166 aa19.51■□□□□ 0.71
HERC4-212ENST00000505760 THBS3P49746 956 aa19.51■□□□□ 0.71
HERC4-212ENST00000505760 ZNF816Q0VGE8 651 aaPredicted RBP19.51■□□□□ 0.71
HERC4-212ENST00000505760 OR2G6Q5TZ20 316 aa19.51■□□□□ 0.71
HERC4-212ENST00000505760 ETV3LQ6ZN32 361 aa19.51■□□□□ 0.71
HERC4-212ENST00000505760 OR2W3Q7Z3T1 314 aa19.51■□□□□ 0.71
HERC4-212ENST00000505760 ZFP57Q9NU63 452 aa19.51■□□□□ 0.71
HERC4-212ENST00000505760 IGHV1-3A0A0C4DH29 117 aa19.5■□□□□ 0.71
HERC4-212ENST00000505760 WI2-2373I1.2A0A1W2PRP0 233 aa19.5■□□□□ 0.71
HERC4-212ENST00000505760 SDCBPO00560 298 aaPredicted RBP19.5■□□□□ 0.71
HERC4-212ENST00000505760 ZNF780AO75290 641 aaPredicted RBP19.5■□□□□ 0.71
HERC4-212ENST00000505760 IGHG2P01859 326 aa19.5■□□□□ 0.71
HERC4-212ENST00000505760 SLC6A1P30531 599 aa19.5■□□□□ 0.71
HERC4-212ENST00000505760 EGFEM1PQ0D2K5 195 aa19.5■□□□□ 0.71
HERC4-212ENST00000505760 RIPK1Q13546 671 aa19.5■□□□□ 0.71
HERC4-212ENST00000505760 MPV17LQ2QL34 196 aa19.5■□□□□ 0.71
HERC4-212ENST00000505760 SLC22A6Q4U2R8 563 aa19.5■□□□□ 0.71
HERC4-212ENST00000505760 C8orf86Q6ZUL3 223 aa19.5■□□□□ 0.71
HERC4-212ENST00000505760 COMMD1Q8N668 190 aa19.5■□□□□ 0.71
HERC4-212ENST00000505760 OR52M1Q8NGK5 317 aa19.5■□□□□ 0.71
HERC4-212ENST00000505760 CCDC107Q8WV48 283 aa19.5■□□□□ 0.71
HERC4-212ENST00000505760 ORAI1Q96D31 301 aa19.5■□□□□ 0.71
HERC4-212ENST00000505760 SMIM19Q96E16 107 aa19.5■□□□□ 0.71
HERC4-212ENST00000505760 SIRT4Q9Y6E7 314 aaPredicted RBP19.5■□□□□ 0.71
HERC4-212ENST00000505760 IGHV3-72A0A0B4J1Y9 119 aa19.49■□□□□ 0.71
HERC4-212ENST00000505760 IRGMA1A4Y4 181 aa19.49■□□□□ 0.71
HERC4-212ENST00000505760 NCBP2LA6PVI3 153 aaKnown RBP19.49■□□□□ 0.71
HERC4-212ENST00000505760 GTF2F2P13984 249 aa19.49■□□□□ 0.71
HERC4-212ENST00000505760 MYL12AP19105 171 aa19.49■□□□□ 0.71
HERC4-212ENST00000505760 C18orf65Q6ZTR6 163 aa19.49■□□□□ 0.71
HERC4-212ENST00000505760 KLHL30-AS1Q8NEE0 82 aa19.49■□□□□ 0.71
HERC4-212ENST00000505760 UBALD1Q8TB05 177 aa19.49■□□□□ 0.71
HERC4-212ENST00000505760 EAF1Q96JC9 268 aaPredicted RBP19.49■□□□□ 0.71
HERC4-212ENST00000505760 ZNF184Q99676 751 aaPredicted RBP19.49■□□□□ 0.71
HERC4-212ENST00000505760 MCRIP2Q9BUT9 160 aaKnown RBP19.49■□□□□ 0.71
HERC4-212ENST00000505760 BABAM2Q9NXR7 383 aa19.49■□□□□ 0.71
HERC4-212ENST00000505760 SMPD3Q9NY59 655 aaPredicted RBP19.49■□□□□ 0.71
HERC4-212ENST00000505760 CKLFQ9UBR5 152 aa19.49■□□□□ 0.71
HERC4-212ENST00000505760 C15orf65H3BRN8 121 aa19.48■□□□□ 0.71
HERC4-212ENST00000505760 OGG1O15527 345 aa19.48■□□□□ 0.71
HERC4-212ENST00000505760 IL3RAP26951 378 aa19.48■□□□□ 0.71
HERC4-212ENST00000505760 EBI3Q14213 229 aa19.48■□□□□ 0.71
HERC4-212ENST00000505760 VAX1Q5SQQ9 334 aa19.48■□□□□ 0.71
HERC4-212ENST00000505760 STPG2Q8N412 459 aa19.48■□□□□ 0.71
HERC4-212ENST00000505760 STX19Q8N4C7 294 aa19.48■□□□□ 0.71
HERC4-212ENST00000505760 OR13C5Q8NGS8 318 aa19.48■□□□□ 0.71
HERC4-212ENST00000505760 OR2T10Q8NGZ9 312 aa19.48■□□□□ 0.71
HERC4-212ENST00000505760 AIPO00170 330 aa19.47■□□□□ 0.71
HERC4-212ENST00000505760 ORC5O43913 435 aa19.47■□□□□ 0.71
HERC4-212ENST00000505760 BAG2O95816 211 aa19.47■□□□□ 0.71
HERC4-212ENST00000505760 MYCNOSP40205 109 aa19.47■□□□□ 0.71
HERC4-212ENST00000505760 TGIF2LXQ8IUE1 241 aa19.47■□□□□ 0.71
HERC4-212ENST00000505760 IZUMO1Q8IYV9 350 aa19.47■□□□□ 0.71
HERC4-212ENST00000505760 LINC00311Q8N616 119 aa19.47■□□□□ 0.71
HERC4-212ENST00000505760 C8orf31Q8N9H6 132 aa19.47■□□□□ 0.71
HERC4-212ENST00000505760 GHSRQ92847 366 aa19.47■□□□□ 0.71
HERC4-212ENST00000505760 RDH12Q96NR8 316 aa19.47■□□□□ 0.71
HERC4-212ENST00000505760 GFOD1Q9NXC2 390 aa19.47■□□□□ 0.71
HERC4-212ENST00000505760 IGHV3-43A0A0B4J1X8 118 aa19.46■□□□□ 0.71
HERC4-212ENST00000505760 A0A1W2PP11 408 aa19.46■□□□□ 0.71
HERC4-212ENST00000505760 AP4M1O00189 453 aa19.46■□□□□ 0.71
HERC4-212ENST00000505760 MT-ND4P03905 459 aa19.46■□□□□ 0.71
HERC4-212ENST00000505760 IGHV3-43DP0DP04 118 aa19.46■□□□□ 0.71
HERC4-212ENST00000505760 GPR176Q14439 515 aa19.46■□□□□ 0.71
HERC4-212ENST00000505760 ZNF497Q6ZNH5 498 aa19.46■□□□□ 0.71
HERC4-212ENST00000505760 ZNF695Q8IW36 515 aa19.46■□□□□ 0.71
HERC4-212ENST00000505760 SPACA1Q9HBV2 294 aa19.46■□□□□ 0.71
HERC4-212ENST00000505760 CHCHD3Q9NX63 227 aaKnown RBP19.46■□□□□ 0.71
HERC4-212ENST00000505760 DIMT1Q9UNQ2 313 aaKnown RBP19.46■□□□□ 0.71
HERC4-212ENST00000505760 EXOSC1Q9Y3B2 195 aaKnown RBP19.46■□□□□ 0.71
HERC4-212ENST00000505760 LINC01548A6NM66 108 aa19.45■□□□□ 0.7
HERC4-212ENST00000505760 IGFBP3P17936 291 aaPredicted RBP19.45■□□□□ 0.7
HERC4-212ENST00000505760 GPR12P47775 334 aa19.45■□□□□ 0.7
HERC4-212ENST00000505760 MED21Q13503 144 aa19.45■□□□□ 0.7
HERC4-212ENST00000505760 Q499Y3 187 aa19.45■□□□□ 0.7
HERC4-212ENST00000505760 TEX38Q6PEX7 206 aa19.45■□□□□ 0.7
HERC4-212ENST00000505760 RTN4IP1Q8WWV3 396 aaPredicted RBP19.45■□□□□ 0.7
HERC4-212ENST00000505760 GON7Q9BXV9 100 aa19.45■□□□□ 0.7
HERC4-212ENST00000505760 ABCG5Q9H222 651 aa19.45■□□□□ 0.7
HERC4-212ENST00000505760 RAB9BQ9NP90 201 aa19.45■□□□□ 0.7
HERC4-212ENST00000505760 LIN7CQ9NUP9 197 aaKnown RBP19.45■□□□□ 0.7
HERC4-212ENST00000505760 CLEC2DQ9UHP7 191 aa19.45■□□□□ 0.7
HERC4-212ENST00000505760 TRBV5-5A0A0J9YX44 114 aa19.44■□□□□ 0.7
HERC4-212ENST00000505760 MAGEA13PA6NCF6 341 aa19.44■□□□□ 0.7
HERC4-212ENST00000505760 MCRIP1C9JLW8 97 aa19.44■□□□□ 0.7
HERC4-212ENST00000505760 SPINT2O43291 252 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms