RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 CKLFQ9UBR5 152 aa15.83■□□□□ 0.12
UBE2D3-220ENST00000505307 DIMT1Q9UNQ2 313 aaKnown RBP15.83■□□□□ 0.12
UBE2D3-220ENST00000505307 ORC5O43913 435 aa15.82■□□□□ 0.12
UBE2D3-220ENST00000505307 GPX5O75715 221 aa15.82■□□□□ 0.12
UBE2D3-220ENST00000505307 GTF2F2P13984 249 aa15.82■□□□□ 0.12
UBE2D3-220ENST00000505307 SLC35B1P78383 322 aa15.82■□□□□ 0.12
UBE2D3-220ENST00000505307 EBI3Q14213 229 aa15.82■□□□□ 0.12
UBE2D3-220ENST00000505307 Q3ZCU0 254 aa15.82■□□□□ 0.12
UBE2D3-220ENST00000505307 OR2G6Q5TZ20 316 aa15.82■□□□□ 0.12
UBE2D3-220ENST00000505307 C10orf99Q6UWK7 81 aa15.82■□□□□ 0.12
UBE2D3-220ENST00000505307 STX19Q8N4C7 294 aa15.82■□□□□ 0.12
UBE2D3-220ENST00000505307 LINC00311Q8N616 119 aa15.82■□□□□ 0.12
UBE2D3-220ENST00000505307 SPACA1Q9HBV2 294 aa15.82■□□□□ 0.12
UBE2D3-220ENST00000505307 TRBV5-5A0A0J9YX44 114 aa15.81■□□□□ 0.12
UBE2D3-220ENST00000505307 CCRL2O00421 344 aa15.81■□□□□ 0.12
UBE2D3-220ENST00000505307 HSD17B6O14756 317 aa15.81■□□□□ 0.12
UBE2D3-220ENST00000505307 GEMIN2O14893 280 aaKnown RBP15.81■□□□□ 0.12
UBE2D3-220ENST00000505307 BAG2O95816 211 aa15.81■□□□□ 0.12
UBE2D3-220ENST00000505307 IGKV1D-33P01593 117 aa15.81■□□□□ 0.12
UBE2D3-220ENST00000505307 IGKV1-33P01594 117 aa15.81■□□□□ 0.12
UBE2D3-220ENST00000505307 SERPINA2P20848 420 aa15.81■□□□□ 0.12
UBE2D3-220ENST00000505307 IL3RAP26951 378 aa15.81■□□□□ 0.12
UBE2D3-220ENST00000505307 HNF4GQ14541 408 aa15.81■□□□□ 0.12
UBE2D3-220ENST00000505307 YIF1BQ5BJH7 314 aa15.81■□□□□ 0.12
UBE2D3-220ENST00000505307 TTC23Q5W5X9 447 aa15.81■□□□□ 0.12
UBE2D3-220ENST00000505307 FOXRED2Q8IWF2 684 aa15.81■□□□□ 0.12
UBE2D3-220ENST00000505307 GHSRQ92847 366 aa15.81■□□□□ 0.12
UBE2D3-220ENST00000505307 ARL11Q969Q4 196 aa15.81■□□□□ 0.12
UBE2D3-220ENST00000505307 MRPS24Q96EL2 167 aaKnown RBP15.81■□□□□ 0.12
UBE2D3-220ENST00000505307 ZNF184Q99676 751 aaPredicted RBP15.81■□□□□ 0.12
UBE2D3-220ENST00000505307 C8orf4Q9NR00 106 aa15.81■□□□□ 0.12
UBE2D3-220ENST00000505307 IGHV1-3A0A0C4DH29 117 aa15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 SERPINE3A8MV23 424 aa15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 C15orf65H3BRN8 121 aa15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 EBAG9O00559 213 aa15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 MPIG6BO95866 241 aa15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 IGHG2P01859 326 aa15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 IGFBP3P17936 291 aaPredicted RBP15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 RPL23AP62750 156 aaKnown RBP15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 DIAPH2-AS1Q14236 149 aa15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 TMEM30BQ3MIR4 351 aa15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 Q499Y3 187 aa15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 SLC22A6Q4U2R8 563 aa15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 ATAD3CQ5T2N8 411 aa15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 DMKNQ6E0U4 476 aaPredicted RBP15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 SLC35E3Q7Z769 313 aa15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 ZNF329Q86UD4 541 aa15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 IZUMO1Q8IYV9 350 aa15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 LINC00482Q8N8I6 264 aa15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 SETD9Q8NE22 299 aa15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 NEK7Q8TDX7 302 aa15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 DPF1Q92782 380 aa15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 TMEM80Q96HE8 168 aa15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 MCRIP2Q9BUT9 160 aaKnown RBP15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 SIRT4Q9Y6E7 314 aaPredicted RBP15.8■□□□□ 0.12
UBE2D3-220ENST00000505307 TRAV39A0A0B4J263 110 aa15.79■□□□□ 0.12
UBE2D3-220ENST00000505307 SDCBPO00560 298 aaPredicted RBP15.79■□□□□ 0.12
UBE2D3-220ENST00000505307 MT-ND4P03905 459 aa15.79■□□□□ 0.12
UBE2D3-220ENST00000505307 ZNF497Q6ZNH5 498 aa15.79■□□□□ 0.12
UBE2D3-220ENST00000505307 MOB3BQ86TA1 216 aa15.79■□□□□ 0.12
UBE2D3-220ENST00000505307 TGIF2LXQ8IUE1 241 aa15.79■□□□□ 0.12
UBE2D3-220ENST00000505307 CDH26Q8IXH8 852 aa15.79■□□□□ 0.12
UBE2D3-220ENST00000505307 OR2T10Q8NGZ9 312 aa15.79■□□□□ 0.12
UBE2D3-220ENST00000505307 GFOD1Q9NXC2 390 aa15.79■□□□□ 0.12
UBE2D3-220ENST00000505307 ZNF581Q9P0T4 197 aa15.79■□□□□ 0.12
UBE2D3-220ENST00000505307 A0A1W2PPE3 182 aa15.78■□□□□ 0.12
UBE2D3-220ENST00000505307 MCRIP1C9JLW8 97 aa15.78■□□□□ 0.12
UBE2D3-220ENST00000505307 FSTP19883 344 aa15.78■□□□□ 0.12
UBE2D3-220ENST00000505307 TAS2R43P59537 309 aa15.78■□□□□ 0.12
UBE2D3-220ENST00000505307 EGFEM1PQ0D2K5 195 aa15.78■□□□□ 0.12
UBE2D3-220ENST00000505307 OR2W3Q7Z3T1 314 aa15.78■□□□□ 0.12
UBE2D3-220ENST00000505307 MRPL41Q8IXM3 137 aaKnown RBP15.78■□□□□ 0.12
UBE2D3-220ENST00000505307 EAF1Q96JC9 268 aaPredicted RBP15.78■□□□□ 0.12
UBE2D3-220ENST00000505307 NOL4LQ96MY1 436 aaPredicted RBP15.78■□□□□ 0.12
UBE2D3-220ENST00000505307 GON7Q9BXV9 100 aa15.78■□□□□ 0.12
UBE2D3-220ENST00000505307 AIPO00170 330 aa15.77■□□□□ 0.12
UBE2D3-220ENST00000505307 AP4M1O00189 453 aa15.77■□□□□ 0.12
UBE2D3-220ENST00000505307 SPINT2O43291 252 aa15.77■□□□□ 0.12
UBE2D3-220ENST00000505307 TXNL1O43396 289 aa15.77■□□□□ 0.12
UBE2D3-220ENST00000505307 CA11O75493 328 aa15.77■□□□□ 0.12
UBE2D3-220ENST00000505307 CD1BP29016 333 aa15.77■□□□□ 0.12
UBE2D3-220ENST00000505307 MYCNOSP40205 109 aa15.77■□□□□ 0.12
UBE2D3-220ENST00000505307 THBS3P49746 956 aa15.77■□□□□ 0.12
UBE2D3-220ENST00000505307 TRAT1Q6PIZ9 186 aa15.77■□□□□ 0.12
UBE2D3-220ENST00000505307 STPG2Q8N412 459 aa15.77■□□□□ 0.12
UBE2D3-220ENST00000505307 PACRGLQ8N7B6 248 aa15.77■□□□□ 0.12
UBE2D3-220ENST00000505307 OR8H1Q8NGG4 311 aa15.77■□□□□ 0.12
UBE2D3-220ENST00000505307 CCDC107Q8WV48 283 aa15.77■□□□□ 0.12
UBE2D3-220ENST00000505307 LIN7CQ9NUP9 197 aaKnown RBP15.77■□□□□ 0.12
UBE2D3-220ENST00000505307 RCC2Q9P258 522 aaKnown RBP15.77■□□□□ 0.12
UBE2D3-220ENST00000505307 ZMAT5Q9UDW3 170 aaKnown RBP15.77■□□□□ 0.12
UBE2D3-220ENST00000505307 CLEC2DQ9UHP7 191 aa15.77■□□□□ 0.12
UBE2D3-220ENST00000505307 FAM90A10PA6NDY2 464 aa15.76■□□□□ 0.11
UBE2D3-220ENST00000505307 FAM90A7PA6NKC0 464 aa15.76■□□□□ 0.11
UBE2D3-220ENST00000505307 NCBP2LA6PVI3 153 aaKnown RBP15.76■□□□□ 0.11
UBE2D3-220ENST00000505307 FAM90A23PA8MXZ1 464 aa15.76■□□□□ 0.11
UBE2D3-220ENST00000505307 K7EIL1 84 aa15.76■□□□□ 0.11
UBE2D3-220ENST00000505307 LALBAP00709 142 aa15.76■□□□□ 0.11
UBE2D3-220ENST00000505307 RPS11P62280 158 aaKnown RBP eCLIP15.76■□□□□ 0.11
UBE2D3-220ENST00000505307 C6orf183Q5T699 404 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms