RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 SIGLECL1Q8N7X8 197 aa13.45□□□□□ -0.26
SCLT1-205ENST00000503401 OR56B1Q8NGI3 324 aa13.45□□□□□ -0.26
SCLT1-205ENST00000503401 MRPL30Q8TCC3 161 aaKnown RBP13.45□□□□□ -0.26
SCLT1-205ENST00000503401 C17orf50Q8WW18 174 aa13.45□□□□□ -0.26
SCLT1-205ENST00000503401 HDHD3Q9BSH5 251 aaPredicted RBP13.45□□□□□ -0.26
SCLT1-205ENST00000503401 SUCNR1Q9BXA5 334 aa13.45□□□□□ -0.26
SCLT1-205ENST00000503401 PECRQ9BY49 303 aa13.45□□□□□ -0.26
SCLT1-205ENST00000503401 ATG5Q9H1Y0 275 aa13.45□□□□□ -0.26
SCLT1-205ENST00000503401 NCOR1P1Q9H4R4 102 aa13.45□□□□□ -0.26
SCLT1-205ENST00000503401 HEXA-AS1Q9H8Q6 139 aa13.45□□□□□ -0.26
SCLT1-205ENST00000503401 BATF3Q9NR55 127 aa13.45□□□□□ -0.26
SCLT1-205ENST00000503401 SESN1Q9Y6P5 492 aa13.45□□□□□ -0.26
SCLT1-205ENST00000503401 A0A075B6Q4 140 aa13.44□□□□□ -0.26
SCLT1-205ENST00000503401 A0A0U1RQK1 487 aa13.44□□□□□ -0.26
SCLT1-205ENST00000503401 MEIOCA2RUB1 952 aa13.44□□□□□ -0.26
SCLT1-205ENST00000503401 A6NHS1 94 aa13.44□□□□□ -0.26
SCLT1-205ENST00000503401 RAB27BO00194 218 aa13.44□□□□□ -0.26
SCLT1-205ENST00000503401 IFNA2P01563 188 aa13.44□□□□□ -0.26
SCLT1-205ENST00000503401 RCC1P18754 421 aaPredicted RBP13.44□□□□□ -0.26
SCLT1-205ENST00000503401 NFYBP25208 207 aa13.44□□□□□ -0.26
SCLT1-205ENST00000503401 DEFB112Q30KQ8 113 aa13.44□□□□□ -0.26
SCLT1-205ENST00000503401 GAPTQ8N292 157 aa13.44□□□□□ -0.26
SCLT1-205ENST00000503401 SLC25A46Q96AG3 418 aa13.44□□□□□ -0.26
SCLT1-205ENST00000503401 ZMAT3Q9HA38 289 aaKnown RBP13.44□□□□□ -0.26
SCLT1-205ENST00000503401 AK3Q9UIJ7 227 aa13.44□□□□□ -0.26
SCLT1-205ENST00000503401 IGHV3-7P01780 117 aa13.43□□□□□ -0.26
SCLT1-205ENST00000503401 GNB3P16520 340 aa13.43□□□□□ -0.26
SCLT1-205ENST00000503401 PAX6P26367 422 aa13.43□□□□□ -0.26
SCLT1-205ENST00000503401 SAA4P35542 130 aa13.43□□□□□ -0.26
SCLT1-205ENST00000503401 Q6ZPA2 131 aa13.43□□□□□ -0.26
SCLT1-205ENST00000503401 PRR18Q8N4B5 295 aa13.43□□□□□ -0.26
SCLT1-205ENST00000503401 OR13D1Q8NGV5 346 aa13.43□□□□□ -0.26
SCLT1-205ENST00000503401 OR10R2Q8NGX6 335 aa13.43□□□□□ -0.26
SCLT1-205ENST00000503401 PTX4Q96A99 478 aa13.43□□□□□ -0.26
SCLT1-205ENST00000503401 RAB3CQ96E17 227 aa13.43□□□□□ -0.26
SCLT1-205ENST00000503401 KIRREL1Q96J84 757 aa13.43□□□□□ -0.26
SCLT1-205ENST00000503401 TMEM133Q9H2Q1 129 aa13.43□□□□□ -0.26
SCLT1-205ENST00000503401 KCNK7Q9Y2U2 307 aa13.43□□□□□ -0.26
SCLT1-205ENST00000503401 IGHV2-26A0A0B4J1V2 119 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 DPPA5A6NC42 116 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 METTL21EPA6NDL7 271 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 C12orf77C9JDV5 145 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 C15orf65H3BRN8 121 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 CA11O75493 328 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 ARG1P05089 322 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 BPIFB3P59826 476 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 DYNC1I2Q13409 638 aaKnown RBP13.42□□□□□ -0.26
SCLT1-205ENST00000503401 FAM53AQ6NSI3 398 aaPredicted RBP13.42□□□□□ -0.26
SCLT1-205ENST00000503401 ZNF418Q8TF45 676 aaPredicted RBP13.42□□□□□ -0.26
SCLT1-205ENST00000503401 LEAP2Q969E1 77 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 ARL11Q969Q4 196 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 SLC25A38Q96DW6 304 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 DUX5Q96PT3 197 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 DCSTAMPQ9H295 470 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 CHMP1AQ9HD42 196 aaPredicted RBP13.42□□□□□ -0.26
SCLT1-205ENST00000503401 RHBDL2Q9NX52 303 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 IDI2-AS1Q9NZ38 188 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 HSF4Q9ULV5 492 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 NPIPB11E5RHQ5 1161 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 GZMHP20718 246 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 SPCS2Q15005 226 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 TUSC1Q2TAM9 212 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 USP43Q70EL4 1123 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 LHFPL4Q7Z7J7 247 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 CROCCP3Q8IVE0 287 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 SETD6Q8TBK2 473 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 RBM38Q9H0Z9 239 aaKnown RBP13.42□□□□□ -0.26
SCLT1-205ENST00000503401 ZNF286AQ9HBT8 521 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 ESM1Q9NQ30 184 aa13.42□□□□□ -0.26
SCLT1-205ENST00000503401 ELF5Q9UKW6 265 aaPredicted RBP13.42□□□□□ -0.26
SCLT1-205ENST00000503401 TCF21O43680 179 aa13.41□□□□□ -0.26
SCLT1-205ENST00000503401 VENTXO95231 258 aa13.41□□□□□ -0.26
SCLT1-205ENST00000503401 NAPSAO96009 420 aa13.41□□□□□ -0.26
SCLT1-205ENST00000503401 ABHD12Q8N2K0 398 aa13.41□□□□□ -0.26
SCLT1-205ENST00000503401 OR11H6Q8NGC7 330 aa13.41□□□□□ -0.26
SCLT1-205ENST00000503401 OR1L1Q8NH94 360 aa13.41□□□□□ -0.26
SCLT1-205ENST00000503401 AJUBAQ96IF1 538 aa13.41□□□□□ -0.26
SCLT1-205ENST00000503401 CLEC7AQ9BXN2 247 aa13.41□□□□□ -0.26
SCLT1-205ENST00000503401 LINC00574Q9H8X3 128 aa13.41□□□□□ -0.26
SCLT1-205ENST00000503401 ABRACLQ9P1F3 81 aa13.41□□□□□ -0.26
SCLT1-205ENST00000503401 ZNRD1Q9P1U0 126 aa13.41□□□□□ -0.26
SCLT1-205ENST00000503401 SPATA2Q9UM82 520 aa13.41□□□□□ -0.26
SCLT1-205ENST00000503401 ETV7Q9Y603 341 aa13.41□□□□□ -0.26
SCLT1-205ENST00000503401 IGHV3-43A0A0B4J1X8 118 aa13.4□□□□□ -0.26
SCLT1-205ENST00000503401 ODF3BA8MYP8 253 aa13.4□□□□□ -0.26
SCLT1-205ENST00000503401 MFNGO00587 321 aa13.4□□□□□ -0.26
SCLT1-205ENST00000503401 IGHV3-43DP0DP04 118 aa13.4□□□□□ -0.26
SCLT1-205ENST00000503401 HIST1H1DP16402 221 aaKnown RBP13.4□□□□□ -0.26
SCLT1-205ENST00000503401 LGALS4P56470 323 aa13.4□□□□□ -0.26
SCLT1-205ENST00000503401 SCAND1P57086 179 aa13.4□□□□□ -0.26
SCLT1-205ENST00000503401 FAM189A2Q15884 450 aa13.4□□□□□ -0.26
SCLT1-205ENST00000503401 LDLRAD2Q5SZI1 272 aa13.4□□□□□ -0.26
SCLT1-205ENST00000503401 C6orf183Q5T699 404 aa13.4□□□□□ -0.26
SCLT1-205ENST00000503401 ZNF626Q68DY1 528 aa13.4□□□□□ -0.26
SCLT1-205ENST00000503401 OR52W1Q6IF63 320 aa13.4□□□□□ -0.26
SCLT1-205ENST00000503401 RBMS3Q6XE24 437 aaKnown RBP13.4□□□□□ -0.26
SCLT1-205ENST00000503401 RAB2BQ8WUD1 216 aa13.4□□□□□ -0.26
SCLT1-205ENST00000503401 ZDHHC16Q969W1 377 aa13.4□□□□□ -0.26
SCLT1-205ENST00000503401 CMSS1Q9BQ75 279 aaKnown RBP13.4□□□□□ -0.26
SCLT1-205ENST00000503401 TAF9BQ9HBM6 251 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms